BLASTX nr result

ID: Cheilocostus21_contig00061412 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00061412
         (769 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020249785.1| uncharacterized protein LOC109827233 isoform...    61   5e-07

>ref|XP_020249785.1| uncharacterized protein LOC109827233 isoform X1 [Asparagus
           officinalis]
          Length = 494

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 56/181 (30%), Positives = 71/181 (39%), Gaps = 15/181 (8%)
 Frame = -1

Query: 661 CMHCG*TNHTSDRCWQKFGKPPMLT*PQRPPS-V*LHYLETXXXXXXXXXXXXIVAEYDR 485
           C HCG TNH S++CW+KFG+P          +   +    +              A+Y+R
Sbjct: 271 CSHCGRTNHVSEKCWEKFGRPQWAQVADAESTRTSISATTSGGPAATATTVQISQADYER 330

Query: 484 LHK--------SCTIFHSDGFYLYAIGYNISHFL*QYLDIRSGASSHMTSYKTLLASLSL 329
           L +        S T   S G   Y    + S  L       S ASSHMT  K    SL L
Sbjct: 331 LRQLELSQNSHSATHASSSGMDAYIASPHKSWVL------DSRASSHMTGIKDHFVSLHL 384

Query: 328 DTRDPRISIVYSPLIP------VLMTSII*VVSYFLCF*FHVNLLLIYALTKTEYCSVTF 167
             + P I I    L P      V  TS + +        F V+LL I   TK   C VTF
Sbjct: 385 SNKFPSIRIADGTLSPVHGDGVVHATSSLKLSDVLYVPKFPVSLLSISKFTKHNNCKVTF 444

Query: 166 F 164
           F
Sbjct: 445 F 445


Top