BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00061408
         (640 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP31378.1| Retrovirus-related Pol polyprotein from transposo...   130   2e-31
gb|KYP45103.1| Retrovirus-related Pol polyprotein from transposo...   126   2e-31
gb|KYP74424.1| Retrovirus-related Pol polyprotein from transposo...   128   1e-30
gb|KYP42175.1| Retrovirus-related Pol polyprotein from transposo...   123   2e-30
ref|XP_020218720.1| uncharacterized protein LOC109801952 isoform...   125   2e-29
gb|OWM72270.1| hypothetical protein CDL15_Pgr018155 [Punica gran...   125   2e-29
gb|KYP63559.1| Retrovirus-related Pol polyprotein from transposo...   125   2e-29
gb|AFN88207.1| integrase core domain containing protein [Phaseol...   123   8e-29
gb|PNX95208.1| retrovirus-related Pol polyprotein from transposo...   123   1e-28
gb|KYP71833.1| Retrovirus-related Pol polyprotein from transposo...   121   4e-28
gb|KYP44825.1| Retrovirus-related Pol polyprotein from transposo...   121   5e-28
gb|KYP40247.1| Retrovirus-related Pol polyprotein from transposo...   117   2e-27
gb|KYP58728.1| Retrovirus-related Pol polyprotein from transposo...   119   2e-27
emb|CAN74964.1| hypothetical protein VITISV_006810 [Vitis vinifera]   119   3e-27
gb|KYP37017.1| Retrovirus-related Pol polyprotein from transposo...   114   4e-27
gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposo...   118   4e-27
gb|KYP51543.1| Retrovirus-related Pol polyprotein from transposo...   116   5e-27
gb|KYP44170.1| Retrovirus-related Pol polyprotein from transposo...   111   1e-26
gb|KYP51682.1| Retrovirus-related Pol polyprotein from transposo...   110   2e-26
gb|KYP34729.1| Retrovirus-related Pol polyprotein from transposo...   115   4e-26

>gb|KYP31378.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 585

 Score =  130 bits (327), Expect = 2e-31
 Identities = 79/197 (40%), Positives = 113/197 (57%), Gaps = 5/197 (2%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           H++GNRSLF+SL    +L  +++ +GS   + G+GTV L+  L + +VLYVP+ P NLLS
Sbjct: 348 HISGNRSLFSSLSTSAYLPSITMANGSRATSHGVGTVHLSPSLSIDNVLYVPESPFNLLS 407

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           +S LT  L+C ++F        D  +  MIG G +   +     S     ++   T    
Sbjct: 408 LSRLTRSLDCLISFTKDSVFLQDRSSGRMIGTGCESHGLYHLRTSAPVGLVADSPTLI-- 465

Query: 366 HCRLGHPSLDKL-----RLSVSSELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGH 530
           H +LGHPSL KL     RLS  S+L+ +    + QLGKH  SSF    H  +++PF L H
Sbjct: 466 HAQLGHPSLAKLQHLVPRLSKLSQLSCE----SCQLGKHSRSSFSPSVHKQASSPFALVH 521

Query: 531 SDVWGPSLVPSKDGYRY 581
           SD+WGPS VPS  G++Y
Sbjct: 522 SDIWGPSRVPSTLGFQY 538


>gb|KYP45103.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 326

 Score =  126 bits (316), Expect = 2e-31
 Identities = 83/194 (42%), Positives = 109/194 (56%), Gaps = 2/194 (1%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           H+TGN SLF SL        +++VDGS + A GIG +  T  L L  VL VP  P NL+S
Sbjct: 74  HLTGNVSLFHSLSSPKTSHHITLVDGSKVQATGIGQISPTPSLPLKSVLLVPGCPFNLIS 133

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           IS LT  LNC++TF S   +  D  T   IG G +   +  +  S++S   +S ++    
Sbjct: 134 ISKLTRSLNCAITFTSDSFLIQDRSTGQTIGVGYESHGL-YYLQSSTSTICASVESPSLI 192

Query: 366 HCRLGHPSLDKLRLSVS--SELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDV 539
           H RLGHPSL+KL+  V   S L S     + QLGKH  +SF       + +PF + HSDV
Sbjct: 193 HRRLGHPSLNKLKKMVPHLSRLES-LECESCQLGKHVRTSFPKSIKSRAVSPFDVIHSDV 251

Query: 540 WGPSLVPSKDGYRY 581
           WGPS VPS  G+RY
Sbjct: 252 WGPSRVPSLLGHRY 265


>gb|KYP74424.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 584

 Score =  128 bits (321), Expect = 1e-30
 Identities = 83/193 (43%), Positives = 109/193 (56%), Gaps = 1/193 (0%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           HMTGN+S F+ L     L PV++ DGS I   GIG +     L L  VL+VP  P NL+S
Sbjct: 338 HMTGNQSYFSKLSFSDSLPPVTLADGSQIKVHGIGQIHPLPHLPLHSVLFVPGCPFNLIS 397

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           IS LTN L+ SV FV+++ +  D +T   I  G + G   ++  S+  A +S+  +    
Sbjct: 398 ISKLTNTLDFSVLFVNNYVLIQDRRTGQTIEAGHESG--GLYRLSSPIACVST--SADLA 453

Query: 366 HCRLGHPSLDKLRLSVSS-ELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDVW 542
           H RLGHPSL+KLRL V +          + QLGKH   S+QS  H    +PF L HSD+W
Sbjct: 454 HQRLGHPSLEKLRLLVPNLSTVKNIQCESCQLGKHVHQSYQSSVHKCVVSPFTLVHSDIW 513

Query: 543 GPSLVPSKDGYRY 581
           GPS V S  GY Y
Sbjct: 514 GPSRVCSTLGYSY 526


>gb|KYP42175.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 304

 Score =  123 bits (308), Expect = 2e-30
 Identities = 82/194 (42%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           H+TGN SLF SL        +++ DGS + A GIG +  T  L L  VL VP  P NL+S
Sbjct: 10  HLTGNVSLFHSLSSPKTPHHITLADGSKVQATGIGQISPTPSLPLKSVLLVPGCPFNLIS 69

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           IS LT  LNC++TF S   +  D  T   IG G +   +  +  S++S   +S ++    
Sbjct: 70  ISKLTRSLNCAITFTSDSFLIQDRSTGQTIGVGYESHGL-YYLQSSTSTICASVESPSLI 128

Query: 366 HCRLGHPSLDKLRLSVS--SELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDV 539
           H RLGHPSL+KL+  V   S L S     + QLGKH  +SF    +  + +PF + HSDV
Sbjct: 129 HRRLGHPSLNKLKKMVPHLSRLES-LECESCQLGKHVRTSFPKSINSRAVSPFDVIHSDV 187

Query: 540 WGPSLVPSKDGYRY 581
           WG S VPS  GYRY
Sbjct: 188 WGLSRVPSLLGYRY 201


>ref|XP_020218720.1| uncharacterized protein LOC109801952 isoform X2 [Cajanus cajan]
          Length = 839

 Score =  125 bits (313), Expect = 2e-29
 Identities = 81/193 (41%), Positives = 109/193 (56%), Gaps = 1/193 (0%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           HM+GN SLF+S+ L      +++ +GS + + G+G V LT  L L  VL+VPK   NL+S
Sbjct: 326 HMSGNNSLFSSISLPKVPHFITLANGSKVASQGVGQVSLTPSLNLKSVLFVPKCAFNLIS 385

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           +S LT  LNCSVTF ++  V  +  T  +IGGG +   +  F  S S +  +S  T    
Sbjct: 386 LSKLTKSLNCSVTFDANSFVIQERGTGRLIGGGHESRGLYYFETSPSVSCFAS-STPKLL 444

Query: 366 HCRLGHPSLDKLRLSVSSELNSQ-FHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDVW 542
           H RLGHP L KL+  V S    Q     + QLGKH  SSF  +     N+ F + HSD+W
Sbjct: 445 HDRLGHPHLTKLKKMVPSLNKLQALECESCQLGKHVRSSFPKRTETRCNSAFSIIHSDIW 504

Query: 543 GPSLVPSKDGYRY 581
           GPS V S  G+RY
Sbjct: 505 GPSRVTS-FGFRY 516


>gb|OWM72270.1| hypothetical protein CDL15_Pgr018155 [Punica granatum]
          Length = 1054

 Score =  125 bits (313), Expect = 2e-29
 Identities = 78/195 (40%), Positives = 108/195 (55%), Gaps = 4/195 (2%)
 Frame = +3

Query: 9   MTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLSI 188
           M+GN +L +  H  + L  V++ +GS+    G+GT   T+ + LS VLY+  FP NL+SI
Sbjct: 1   MSGNSNLLSHFHNSSSLPSVTLANGSIASVNGLGTAQPTASIPLSSVLYLHNFPYNLISI 60

Query: 189 SALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLK-QGKVNVFFNSTSSAYL--SS*KTTY 359
           S LT  LNC VTF S   V  D +T   IG G + QG   +   +T    +  ++  +  
Sbjct: 61  SKLTKSLNCIVTFTSDSVVIQDSRTGGTIGTGREFQGLYRLSTPTTFEVPIACTAAASPE 120

Query: 360 QWHCRLGHPSLDKLRLSVSS-ELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSD 536
           Q H RLGH SL  L+  V +    SQ    + QLGKH  + F S+    ++APF L HSD
Sbjct: 121 QIHSRLGHHSLANLKQMVPNLSKVSQLECQSYQLGKHIWAQFPSRVSKRASAPFVLVHSD 180

Query: 537 VWGPSLVPSKDGYRY 581
           +WGP  +PS  GYRY
Sbjct: 181 IWGPCPIPSSQGYRY 195


>gb|KYP63559.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1378

 Score =  125 bits (313), Expect = 2e-29
 Identities = 81/193 (41%), Positives = 109/193 (56%), Gaps = 1/193 (0%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           HM+GN SLF+S+ L      +++ +GS + + G+G V LT  L L  VL+VPK   NL+S
Sbjct: 332 HMSGNNSLFSSISLPKVPHFITLANGSKVASQGVGQVSLTPSLNLKSVLFVPKCAFNLIS 391

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           +S LT  LNCSVTF ++  V  +  T  +IGGG +   +  F  S S +  +S  T    
Sbjct: 392 LSKLTKSLNCSVTFDANSFVIQERGTGRLIGGGHESRGLYYFETSPSVSCFAS-STPKLL 450

Query: 366 HCRLGHPSLDKLRLSVSSELNSQ-FHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDVW 542
           H RLGHP L KL+  V S    Q     + QLGKH  SSF  +     N+ F + HSD+W
Sbjct: 451 HDRLGHPHLTKLKKMVPSLNKLQALECESCQLGKHVRSSFPKRTETRCNSAFSIIHSDIW 510

Query: 543 GPSLVPSKDGYRY 581
           GPS V S  G+RY
Sbjct: 511 GPSRVTS-FGFRY 522


>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score =  123 bits (309), Expect = 8e-29
 Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           H+TGN+S F+SL    +L  V++ +G  +P+ G+GT+ L   L + +VLYVP  P NLLS
Sbjct: 366 HITGNQSFFSSLSTTGYLPSVTMANGYKVPSHGVGTINLFPSLSIDNVLYVPGSPFNLLS 425

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLK-QGKVNVFFNSTSSAYLSS*KTTYQ 362
           IS LT  L+C ++F        D  +  MIG G +  G   +  ++   A + S      
Sbjct: 426 ISRLTRSLDCVISFTKDSVSLQDRCSGRMIGTGCESHGLYQLQISAHVGAIMDSPSLI-- 483

Query: 363 WHCRLGHPSLDKLRLSVSSELN-SQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDV 539
            H RLGHPSL K++  V S  N S     + Q GKH  SSF S     +++PF L HSD+
Sbjct: 484 -HARLGHPSLAKMQQLVPSLSNVSSLSCESCQFGKHIRSSFPSSVSQRASSPFALVHSDI 542

Query: 540 WGPSLVPSKDGYRY 581
           WGPS + S  G++Y
Sbjct: 543 WGPSRIKSNLGFQY 556


>gb|PNX95208.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 1345

 Score =  123 bits (308), Expect = 1e-28
 Identities = 77/193 (39%), Positives = 106/193 (54%), Gaps = 1/193 (0%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           HMTGN+SL + L     L  V++ DGS I   G+G       L L  VLY+P  P NL+S
Sbjct: 330 HMTGNKSLLSHLSYSDSLPSVTVADGSKIKVQGLGQAHPLPNLSLESVLYIPGCPFNLIS 389

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           +  L + L+CSV F ++     D +T   IG G + G +       + A +SS + T+Q 
Sbjct: 390 VHKLIHTLDCSVLFNNNSVSIQDRRTGRTIGAGSEAGGLYHLSPPVACASISSQELTHQ- 448

Query: 366 HCRLGHPSLDKLRLSVSS-ELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDVW 542
             RLGHPSL+K+RL V S    S F   + QLGKH  +++  + +    +PF L HSD+W
Sbjct: 449 --RLGHPSLNKMRLLVPSLSKLSSFECQSCQLGKHTRNTYCQRVNKSVASPFALVHSDIW 506

Query: 543 GPSLVPSKDGYRY 581
           GPS V S  GY Y
Sbjct: 507 GPSRVKSTLGYYY 519


>gb|KYP71833.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 612

 Score =  121 bits (303), Expect = 4e-28
 Identities = 82/193 (42%), Positives = 105/193 (54%), Gaps = 1/193 (0%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           H+ GN SLF S+        +++ DGS I   GIG V L+  L L  VL+VPK P NL+S
Sbjct: 202 HIAGNDSLFLSMSSLKSPHLITLADGSKIAPKGIGQVSLSPMLNLKSVLFVPKCPFNLIS 261

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           +S LT  LNCSVTF +  CV  +  T  MIG G + G +  +F    S    +       
Sbjct: 262 LSQLTKSLNCSVTFNAESCVIQERGTGKMIGVGHEFGGL-YYFGMQPSVSCVAVLPPKLL 320

Query: 366 HCRLGHPSLDKLRLSVSS-ELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDVW 542
           H RLGHPSL KL+L V S +   +    + QLGKH  SSF  +     N+ F   HSD+W
Sbjct: 321 HDRLGHPSLSKLKLLVPSLKTLEELGCESCQLGKHVRSSFPKQTEKRCNSVFTTIHSDIW 380

Query: 543 GPSLVPSKDGYRY 581
           GPS V S  G+RY
Sbjct: 381 GPSRVTS-FGFRY 392


>gb|KYP44825.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1371

 Score =  121 bits (303), Expect = 5e-28
 Identities = 82/193 (42%), Positives = 105/193 (54%), Gaps = 1/193 (0%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           H+ GN SLF S+        +++ DGS I   GIG V L+  L L  VL+VPK P NL+S
Sbjct: 326 HIAGNDSLFLSMSSLKSPHLITLADGSKIAPKGIGQVSLSPMLNLKSVLFVPKCPFNLIS 385

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           +S LT  LNCSVTF +  CV  +  T  MIG G + G +  +F    S    +       
Sbjct: 386 LSQLTKSLNCSVTFNAESCVIQERGTGKMIGVGHEFGGL-YYFGMQPSVSCVAVLPPKLL 444

Query: 366 HCRLGHPSLDKLRLSVSS-ELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDVW 542
           H RLGHPSL KL+L V S +   +    + QLGKH  SSF  +     N+ F   HSD+W
Sbjct: 445 HDRLGHPSLSKLKLLVPSLKTLEELGCESCQLGKHVRSSFPKQTEKRCNSVFTTIHSDIW 504

Query: 543 GPSLVPSKDGYRY 581
           GPS V S  G+RY
Sbjct: 505 GPSRVTS-FGFRY 516


>gb|KYP40247.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 385

 Score =  117 bits (292), Expect = 2e-27
 Identities = 75/193 (38%), Positives = 105/193 (54%), Gaps = 1/193 (0%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           ++TGN SLF SL        +++ DGS + A+GIG +  T  L L  VL VP  P N +S
Sbjct: 74  YLTGNVSLFPSLSSPKTPHHITLADGSKVQAIGIGQISPTPSLPLKFVLLVPGCPFNYIS 133

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           IS LT  LNC++T+     +  D  T   IG G K   +  +   ++S   +S ++    
Sbjct: 134 ISKLTRSLNCAITYTFDSFLIQDRSTGQTIGVGSKSHGL-YYLQPSTSTICASVESPSLI 192

Query: 366 HCRLGHPSLDKLRLSVSS-ELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDVW 542
           H RLGHPSL+KL+  V            + QLGKH  +SF +  +  + +PF + HSDVW
Sbjct: 193 HRRLGHPSLNKLKKMVPHLSCLESLECESCQLGKHVRTSFPNSINSRAVSPFDVIHSDVW 252

Query: 543 GPSLVPSKDGYRY 581
           GPS VPS  G+RY
Sbjct: 253 GPSRVPSLLGHRY 265


>gb|KYP58728.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1402

 Score =  119 bits (299), Expect = 2e-27
 Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 2/194 (1%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           H+TGN SLF +L        +++ DGS + A GIG +     L L  VL VP  P NL+S
Sbjct: 353 HLTGNVSLFPNLSSPRTPHHITLADGSKVQATGIGQISPLPSLPLKSVLLVPGCPFNLIS 412

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           IS LT  LNC +TF S   +  D  T   IG G +   +  +   ++S   +S ++    
Sbjct: 413 ISKLTRSLNCVITFTSDSFLIQDRSTGQTIGAGSESHGL-YYLQPSTSTICASIESPGLI 471

Query: 366 HCRLGHPSLDKLRLSVS--SELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDV 539
           H RLGHPSL+KL+  V   S L S     + QLGKH  +SF +  +  + +PF + HSDV
Sbjct: 472 HRRLGHPSLNKLKKMVPHLSRLES-LECESCQLGKHVRASFPNSINSRAMSPFDVIHSDV 530

Query: 540 WGPSLVPSKDGYRY 581
           WGPS +PS  G+RY
Sbjct: 531 WGPSRIPSLLGHRY 544


>emb|CAN74964.1| hypothetical protein VITISV_006810 [Vitis vinifera]
          Length = 1248

 Score =  119 bits (297), Expect = 3e-27
 Identities = 76/195 (38%), Positives = 102/195 (52%), Gaps = 2/195 (1%)
 Frame = +3

Query: 3   SHMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLL 182
           +HMT N   F+S        PV+I DGS    +G  TV  TS + LS VL +PK   NL+
Sbjct: 298 NHMTDNPKTFSSFRSHLASSPVTIADGSTSNVVGSRTVKPTSSITLSSVLSLPKLAFNLI 357

Query: 183 SISALTNVLNCSVTFVSSHCVF*DLKTKAMIG-GGLKQGKVNVFFNSTSSAYLSS*KTTY 359
           S+S LT  LNC ++F   HC+F DL TK +IG G +  G   +      S   SS  ++ 
Sbjct: 358 SVSKLTKDLNCCISFFLDHCLFQDLMTKQIIGKGHVYDGLYILDAWVPRSVACSSIASSV 417

Query: 360 QWHCRLGHPSLDKL-RLSVSSELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSD 536
           + HCRLGHPSL  L +L         F+  +    KH  SS   + +  + + F L H D
Sbjct: 418 KAHCRLGHPSLPVLKKLCPQFHSLPSFNCESCHFAKHHYSSLSPRVNKRAESIFELVHFD 477

Query: 537 VWGPSLVPSKDGYRY 581
           VWGP  + SK G+RY
Sbjct: 478 VWGPCPITSKTGFRY 492


>gb|KYP37017.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 279

 Score =  114 bits (284), Expect = 4e-27
 Identities = 79/193 (40%), Positives = 102/193 (52%), Gaps = 1/193 (0%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           H+ GN SLF S+        +++ DGS I   GIG V L+  L L  +L+VP  P NL+S
Sbjct: 36  HIAGNDSLFLSMSSLKSPYLITLADGSKIAPKGIGQVSLSPMLNLKSILFVPNCPFNLIS 95

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           +S LT  L C VTF    CV  +  T  MIG G + G +  +F    SA   +  +    
Sbjct: 96  LSQLTKSLICLVTFNVESCVIQERGTGKMIGIGHEFGGL-YYFGMQPSASCVAVLSPKLL 154

Query: 366 HCRLGHPSLDKLRLSVSS-ELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDVW 542
           H RL HPSL KL+L V S +   +    + QLGKH  SSF  K     N+ F   HSD+W
Sbjct: 155 HDRLSHPSLSKLKLLVPSLKTLEELGCESCQLGKHVRSSFPKKTEKRCNSVFTTIHSDIW 214

Query: 543 GPSLVPSKDGYRY 581
           GPS V S  G+RY
Sbjct: 215 GPSRVTS-FGFRY 226


>gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1355

 Score =  118 bits (296), Expect = 4e-27
 Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 2/194 (1%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           H+TGN SLF +L        +++ DGS + A GIG +     L L  VL VP  P NL+S
Sbjct: 306 HLTGNVSLFPNLSSPKTPHHITLADGSKVQATGIGQISPLPSLPLKSVLLVPGCPFNLIS 365

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           IS LT  LNC +TF S   +  D  T   IG G +   +  +   ++S   +S ++    
Sbjct: 366 ISKLTRSLNCVITFTSDSFLIQDRSTGQTIGAGSESHGL-YYLQPSTSTICASIESPGLI 424

Query: 366 HCRLGHPSLDKLRLSVS--SELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDV 539
           H RLGHPSL+KL+  V   S L S     + QLGKH  +SF +  +  + +PF + HSDV
Sbjct: 425 HRRLGHPSLNKLKKMVPHLSRLVS-LECESCQLGKHVRASFPNSINSRAMSPFDVIHSDV 483

Query: 540 WGPSLVPSKDGYRY 581
           WGPS +PS  G+RY
Sbjct: 484 WGPSRIPSLLGHRY 497


>gb|KYP51543.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 439

 Score =  116 bits (291), Expect = 5e-27
 Identities = 76/197 (38%), Positives = 107/197 (54%), Gaps = 5/197 (2%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           H+ GNRS F+SL   T+L  +++ +GS   + G+GTV L+  L + +VL VP+ P NLL 
Sbjct: 215 HIYGNRSFFSSLSTSTYLPSITMANGSRATSHGVGTVHLSPSLSIDNVLNVPESPFNLLP 274

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           +S LT  L+C ++F        D  +  MIG G +     ++   TS+       +    
Sbjct: 275 LSRLTRSLDCLISFTKDSVFLQDRSSGRMIGTGCESH--GLYHLRTSAPVGLVADSPSLI 332

Query: 366 HCRLGHPSLDKL-----RLSVSSELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGH 530
           H +LGHPSL KL     RLS  S L+ +    + QLGKH  SSF    H  + +PF L H
Sbjct: 333 HAQLGHPSLAKLQHLVPRLSKLSHLSCE----SCQLGKHSRSSFSPSVHNRALSPFALVH 388

Query: 531 SDVWGPSLVPSKDGYRY 581
            D+WGPS VPS  G+ Y
Sbjct: 389 YDIWGPSRVPSTLGFLY 405


>gb|KYP44170.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 244

 Score =  111 bits (278), Expect = 1e-26
 Identities = 79/192 (41%), Positives = 105/192 (54%), Gaps = 1/192 (0%)
 Frame = +3

Query: 9   MTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLSI 188
           MTGN+S F+ L     L P++  DGS I   GIG +     L L  VL+VP  P NL+SI
Sbjct: 1   MTGNQSFFSKLSFSDSLPPLA--DGSQIKVHGIGQIHPLPHLPLHSVLFVPGCPFNLISI 58

Query: 189 SALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQWH 368
           S LT+ L+ SV FV++  +  D +T   IG G + G   ++  S   A +S+  +    H
Sbjct: 59  SKLTSTLDFSVLFVNNSVLIQDRRTGQTIGAGHESG--GLYRLSPLIARVST--SADLAH 114

Query: 369 CRLGHPSLDKLRLSVSS-ELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDVWG 545
            RLGHPSL+KLRL V S          + QLGKH   S+QS  +  + +PF L HSD+WG
Sbjct: 115 QRLGHPSLEKLRLLVPSLSTIKNIQCESCQLGKHVRQSYQSSVNKCAASPFTLVHSDIWG 174

Query: 546 PSLVPSKDGYRY 581
            S V S   Y Y
Sbjct: 175 SSRVCSTLDYSY 186


>gb|KYP51682.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 221

 Score =  110 bits (276), Expect = 2e-26
 Identities = 79/193 (40%), Positives = 101/193 (52%), Gaps = 1/193 (0%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           H+ GN SLF S+        +++ DGS I   GIG V L+  L L  VL+VP  P NL+S
Sbjct: 17  HIAGNDSLFLSMSSLKSPHLITLADGSKIAPKGIGQVSLSPMLNLKSVLFVPNCPFNLIS 76

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           +S LT  LNC VTF +  CV  +  T  MIG G + G +  +F    SA           
Sbjct: 77  LSQLTKSLNCLVTFNAESCVIQERGTGRMIGVGHEFGGL-YYFGMQPSASCVVVLPPKLL 135

Query: 366 HCRLGHPSLDKLRLSVSS-ELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDVW 542
           H RLGHPSL KL+L V S +   +    + QLGKH  SSF  +     N+ F   HSD+W
Sbjct: 136 HDRLGHPSLSKLKLLVPSLKTLEELGCESCQLGKHVRSSFPKQIEKRCNSVFTTIHSDIW 195

Query: 543 GPSLVPSKDGYRY 581
           G   V S  G+RY
Sbjct: 196 GLGHVTS-FGFRY 207


>gb|KYP34729.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1180

 Score =  115 bits (289), Expect = 4e-26
 Identities = 78/194 (40%), Positives = 105/194 (54%), Gaps = 2/194 (1%)
 Frame = +3

Query: 6   HMTGNRSLFTSLHLDTHLLPVSIVDGSLIPALGIGTV*LTSKLVLSHVLYVPKFPINLLS 185
           H+TGN SLF +L        +++ DGS + A GIG +     L L  VL VP  P NL+S
Sbjct: 148 HLTGNVSLFRNLSSPKTPHHITLADGSKVQATGIGQISPLPSLPLKSVLLVPGCPFNLIS 207

Query: 186 ISALTNVLNCSVTFVSSHCVF*DLKTKAMIGGGLKQGKVNVFFNSTSSAYLSS*KTTYQW 365
           IS LT  LNC +TF S   +  D  T   IG G +   +  +   ++S   +S ++    
Sbjct: 208 ISKLTRSLNCVITFTSDSFLIQDRSTGQTIGAGSESHGL-YYLQPSTSTICASIESPGLI 266

Query: 366 HCRLGHPSLDKLRLSVS--SELNSQFHYNA*QLGKHFCSSFQSKDHVLSNAPFCLGHSDV 539
           H RLGHPSL+KL+  V   S L S     + QLGKH  +SF +  +  +   F + HSDV
Sbjct: 267 HRRLGHPSLNKLKKMVPHLSRLES-LECESCQLGKHVRASFPNSVNSRAMCLFDVIHSDV 325

Query: 540 WGPSLVPSKDGYRY 581
           WGPS VPS  G+RY
Sbjct: 326 WGPSRVPSLLGHRY 339