BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00061400
         (618 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor...    94   9e-41
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration...    93   3e-40
gb|ATZ69467.1| ORF3 polyprotein [Cacao swollen shoot Ghana J virus]    78   2e-27
gb|ABU93491.1| polyprotein, partial [Citrus yellow mosaic virus]       79   3e-27
gb|ABU93490.1| polyprotein, partial [Citrus yellow mosaic virus]       79   2e-26
gb|ATZ69463.1| ORF3 polyprotein [Cacao swollen shoot CE virus]         74   4e-25
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]                    95   1e-23
gb|ANK58545.1| polyprotein [Fig badnavirus 1]                          95   1e-23
gb|ANK58542.1| polyprotein [Fig badnavirus 1]                          95   1e-23
gb|ANK58539.1| polyprotein [Fig badnavirus 1]                          95   1e-23
gb|ANK58536.1| polyprotein [Fig badnavirus 1]                          95   1e-23
gb|ANK58548.1| polyprotein [Fig badnavirus 1]                          94   4e-23
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962...    92   8e-23
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]...    75   1e-22
gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus]           89   3e-20
gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus]           89   3e-20
gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus]           89   3e-20
gb|APB42235.1| ORF3 [Dioscorea bacilliform virus]                      86   3e-19
ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus] >...    83   4e-19
gb|ABI47986.1| ORF3 protein [Dioscorea bacilliform virus]              83   4e-19

>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
 emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
          Length = 1830

 Score = 93.6 bits (231), Expect(3) = 9e-41
 Identities = 44/82 (53%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGE--DKEITRTL 391
            HFARECP+++++ KR+ +FE L++PDD +++SV +GE  SD I+S+SEGE  D+E+ R+L
Sbjct: 802  HFARECPNDRKSSKRMAMFENLELPDDCDIVSVQEGEELSDAIYSISEGEDNDEELQRSL 861

Query: 390  KACMQEEFIYMLGEVDGGYRPQ 325
            +     E + MLGEVDGGYRPQ
Sbjct: 862  QTM---EIVLMLGEVDGGYRPQ 880



 Score = 79.7 bits (195), Expect(3) = 9e-41
 Identities = 37/65 (56%), Positives = 46/65 (70%)
 Frame = -2

Query: 326  RAYSNQKARIHGQECQVTACNLCGPYYFKEEVPVAPSPSAQFFSQNLIREQNYYIIWCEG 147
            R  S ++ARIH   C +TACNLCGPYY K EVPV P+PS     + +I+EQ+ YI WCE 
Sbjct: 912  RRESLKRARIHCPLCLLTACNLCGPYYLKIEVPVDPAPSTPLNPRRIIQEQHNYIGWCEA 971

Query: 146  EIDRL 132
            EI+RL
Sbjct: 972  EIERL 976



 Score = 42.7 bits (99), Expect(3) = 9e-41
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHL+RNK+CKC+LCGQEG
Sbjct: 784 KHLVRNKRCKCFLCGQEG 801


>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
          Length = 1789

 Score = 92.8 bits (229), Expect(3) = 3e-40
 Identities = 43/82 (52%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGED--KEITRTL 391
            HFARECP+++++ KR+ +FE L++P+D +++SV +GE  SD I+S+SEGED  +E+ R+L
Sbjct: 838  HFARECPNDRKSTKRMAMFENLELPEDCDIVSVQEGEELSDAIYSISEGEDDVEELQRSL 897

Query: 390  KACMQEEFIYMLGEVDGGYRPQ 325
            +     E + MLGEVDGGYRPQ
Sbjct: 898  QTL---ELVLMLGEVDGGYRPQ 916



 Score = 79.0 bits (193), Expect(3) = 3e-40
 Identities = 36/62 (58%), Positives = 45/62 (72%)
 Frame = -2

Query: 317  SNQKARIHGQECQVTACNLCGPYYFKEEVPVAPSPSAQFFSQNLIREQNYYIIWCEGEID 138
            S ++ARIH   C +TACNLCGPYY K EVPV P+PS     + +I+EQ+ YI WCE EI+
Sbjct: 951  SLKRARIHCPLCLLTACNLCGPYYLKIEVPVDPAPSTPLNPRRIIQEQHNYIGWCEAEIE 1010

Query: 137  RL 132
            RL
Sbjct: 1011 RL 1012



 Score = 42.7 bits (99), Expect(3) = 3e-40
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHL+RNK+CKC+LCGQEG
Sbjct: 820 KHLVRNKRCKCFLCGQEG 837


>gb|ATZ69467.1| ORF3 polyprotein [Cacao swollen shoot Ghana J virus]
          Length = 1868

 Score = 77.8 bits (190), Expect(3) = 2e-27
 Identities = 34/79 (43%), Positives = 57/79 (72%), Gaps = 5/79 (6%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGEDK-----EIT 400
            HFARECP+ KR+VKR+ +FE +++PDD+E++SV +G+N+SD I+S+SE E++     E+ 
Sbjct: 824  HFARECPNSKRDVKRVALFEGINLPDDYEIVSVEEGDNESDAIYSLSENEEEEGLPDEVI 883

Query: 399  RTLKACMQEEFIYMLGEVD 343
              +    +E+  Y LG+ +
Sbjct: 884  ERVFMFKEEDHSYWLGKAN 902



 Score = 50.4 bits (119), Expect(3) = 2e-27
 Identities = 24/63 (38%), Positives = 34/63 (53%)
 Frame = -2

Query: 317  SNQKARIHGQECQVTACNLCGPYYFKEEVPVAPSPSAQFFSQNLIREQNYYIIWCEGEID 138
            ++ ++RIH   C +T+C LC P Y   +V     P   F S  LI +Q  YI+W E E  
Sbjct: 942  TSMESRIHCPTCHITSCALCSPIYCNIQVQQLIRPPPPFHSNTLIAQQASYILWLEEENR 1001

Query: 137  RLK 129
            RL+
Sbjct: 1002 RLQ 1004



 Score = 42.7 bits (99), Expect(3) = 2e-27
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHLIRNK+CKCYLCG EG
Sbjct: 806 KHLIRNKRCKCYLCGDEG 823


>gb|ABU93491.1| polyprotein, partial [Citrus yellow mosaic virus]
          Length = 284

 Score = 78.6 bits (192), Expect(2) = 3e-27
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
 Frame = -1

Query: 564 HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGEDKEITRTLKA 385
           HFARECP+++RNVKR+ +FE LD+PDD E++S+ +G+  SD IFS+SEGE+         
Sbjct: 9   HFARECPNDRRNVKRVAMFEGLDLPDDCEIVSIDEGDPDSDAIFSISEGEETGAFEEQCF 68

Query: 384 CMQEEF--IYMLGEVDGGYR 331
             QEE    Y LG+  GGY+
Sbjct: 69  VFQEECNGTYWLGK-RGGYQ 87



 Score = 71.6 bits (174), Expect(2) = 3e-27
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
 Frame = -2

Query: 356 WERSMGVTGP---RAY-----SNQKARIHGQECQVTACNLCGPYYFKEEVPVAPSPSAQF 201
           WE +  +  P   R Y     + Q+AR+H + C +T+C +CGP YF  ++ V P P A F
Sbjct: 103 WEENQPIDDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNRKITVQPIPQAPF 162

Query: 200 FSQNLIREQNYYIIWCEGEIDRLK 129
             + L+++Q  YI WC  EI RLK
Sbjct: 163 NQKGLLQQQQEYIAWCNNEIARLK 186


>gb|ABU93490.1| polyprotein, partial [Citrus yellow mosaic virus]
          Length = 284

 Score = 78.6 bits (192), Expect(2) = 2e-26
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
 Frame = -1

Query: 564 HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGEDKEITRTLKA 385
           HFARECP+++RNVKR+ +FE LD+PDD E++S+ +G+  SD IFS+SEGE+         
Sbjct: 9   HFARECPNDRRNVKRVAMFEGLDLPDDCEIVSIDEGDPDSDAIFSISEGEETGAFEEQCF 68

Query: 384 CMQEEF--IYMLGEVDGGYR 331
             QEE    Y LG+  GGY+
Sbjct: 69  VFQEECNGTYWLGK-RGGYQ 87



 Score = 68.9 bits (167), Expect(2) = 2e-26
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
 Frame = -2

Query: 356 WERSMGVTGP---RAY-----SNQKARIHGQECQVTACNLCGPYYFKEEVPVAPSPSAQF 201
           WE +  +  P   R Y     + Q+AR+H + C +T+C +CGP YF +++ V   P A F
Sbjct: 103 WEENQPIDDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKKITVQQIPQAPF 162

Query: 200 FSQNLIREQNYYIIWCEGEIDRLK 129
             + L+++Q  YI WC  EI RLK
Sbjct: 163 NQKGLLQQQQEYIAWCNNEIARLK 186


>gb|ATZ69463.1| ORF3 polyprotein [Cacao swollen shoot CE virus]
          Length = 1822

 Score = 73.6 bits (179), Expect(3) = 4e-25
 Identities = 31/76 (40%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGED--KEITRTL 391
            HFARECP+ KR++KR+ +FE L++P+++E++SV +G+ +SD I+S+SE E+  +E+   +
Sbjct: 799  HFARECPNSKRDIKRVAMFEGLNLPEEYEIVSVDEGDEKSDAIYSISENEELCEEVEERI 858

Query: 390  KACMQEEFIYMLGEVD 343
                +E+  Y LG+ +
Sbjct: 859  FMLKEEDQSYWLGKTN 874



 Score = 47.0 bits (110), Expect(3) = 4e-25
 Identities = 22/63 (34%), Positives = 32/63 (50%)
 Frame = -2

Query: 317  SNQKARIHGQECQVTACNLCGPYYFKEEVPVAPSPSAQFFSQNLIREQNYYIIWCEGEID 138
            ++  +RIH   CQ+T+C +C   Y    V   P     F S  L+ +Q  YI+W E E  
Sbjct: 914  TSSSSRIHCPSCQLTSCAMCSTIYCDTPVQPKPKLPVPFRSNTLLEQQAAYILWLETENK 973

Query: 137  RLK 129
            RL+
Sbjct: 974  RLQ 976



 Score = 42.4 bits (98), Expect(3) = 4e-25
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHL+RNK+CKCYLCG EG
Sbjct: 781 KHLVRNKRCKCYLCGDEG 798


>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
          Length = 1846

 Score = 94.7 bits (234), Expect(2) = 1e-23
 Identities = 40/82 (48%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGED--KEITRTL 391
            HFARECP+++++ KR+ +FE L++P+D++++SV++GE+ SD I+S+SEGED  +++ ++L
Sbjct: 804  HFARECPNDRKSAKRVAMFEQLELPEDYDIVSVNEGEDNSDAIYSLSEGEDGMEDLGQSL 863

Query: 390  KACMQEEFIYMLGEVDGGYRPQ 325
            K+ M  E ++MLGE DGG+RP+
Sbjct: 864  KSLMITEKMFMLGEEDGGWRPK 885



 Score = 43.5 bits (101), Expect(2) = 1e-23
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHLIRNK+CKCYLCG+EG
Sbjct: 786 KHLIRNKRCKCYLCGEEG 803



 Score = 82.0 bits (201), Expect = 2e-14
 Identities = 42/98 (42%), Positives = 57/98 (58%)
 Frame = -2

Query: 422  KAKTKKLQELSKHACKKSSSICWERSMGVTGPRAYSNQKARIHGQECQVTACNLCGPYYF 243
            K K    Q   +H  + +  I     +   G +  + ++ARIH  +C+ TACNLCGPYYF
Sbjct: 885  KIKVSDEQLACQHKWEHNGEIQQFVYLKCLGCQCPTMKRARIHCPKCKATACNLCGPYYF 944

Query: 242  KEEVPVAPSPSAQFFSQNLIREQNYYIIWCEGEIDRLK 129
            K+EVPVAP P      + LI EQ  +I WCE EI+RL+
Sbjct: 945  KKEVPVAPPPPTPMNPRKLIMEQQNHIQWCEVEIERLE 982


>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score = 95.1 bits (235), Expect(2) = 1e-23
 Identities = 44/82 (53%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGED--KEITRTL 391
            HFARECP++KR+ KR+ +FE L++P+D +++SV +GE+ SD I+S+SEGED   E+ R+L
Sbjct: 823  HFARECPNDKRSSKRMAMFENLEIPEDCDIVSVEEGEDMSDAIYSISEGEDGADELQRSL 882

Query: 390  KACMQEEFIYMLGEVDGGYRPQ 325
            +     E + MLGE+DGGYRPQ
Sbjct: 883  QTL---EIVLMLGEIDGGYRPQ 901



 Score = 42.7 bits (99), Expect(2) = 1e-23
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHL+RNK+CKC+LCGQEG
Sbjct: 805 KHLVRNKRCKCFLCGQEG 822



 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 38/74 (51%), Positives = 51/74 (68%)
 Frame = -2

Query: 353  ERSMGVTGPRAYSNQKARIHGQECQVTACNLCGPYYFKEEVPVAPSPSAQFFSQNLIREQ 174
            +R++  +  R  S ++ARIH   C +TACNLCGPYY K EVPV P+PS     + +I+EQ
Sbjct: 924  QRAVHCSFCRRESIKRARIHCPLCLLTACNLCGPYYLKIEVPVEPAPSTPINPRRIIQEQ 983

Query: 173  NYYIIWCEGEIDRL 132
            + YI WCE EI+RL
Sbjct: 984  HNYIGWCEVEIERL 997


>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score = 95.1 bits (235), Expect(2) = 1e-23
 Identities = 44/82 (53%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGED--KEITRTL 391
            HFARECP++KR+ KR+ +FE L++P+D +++SV +GE+ SD I+S+SEGED   E+ R+L
Sbjct: 823  HFARECPNDKRSSKRMAMFENLEIPEDCDIVSVEEGEDMSDAIYSISEGEDGADELQRSL 882

Query: 390  KACMQEEFIYMLGEVDGGYRPQ 325
            +     E + MLGE+DGGYRPQ
Sbjct: 883  QTL---EIVLMLGEIDGGYRPQ 901



 Score = 42.7 bits (99), Expect(2) = 1e-23
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHL+RNK+CKC+LCGQEG
Sbjct: 805 KHLVRNKRCKCFLCGQEG 822



 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 38/74 (51%), Positives = 51/74 (68%)
 Frame = -2

Query: 353  ERSMGVTGPRAYSNQKARIHGQECQVTACNLCGPYYFKEEVPVAPSPSAQFFSQNLIREQ 174
            +R++  +  R  S ++ARIH   C +TACNLCGPYY K EVPV P+PS     + +I+EQ
Sbjct: 924  QRAVHCSFCRRESIKRARIHCPLCLLTACNLCGPYYLKIEVPVEPAPSTPINPRRIIQEQ 983

Query: 173  NYYIIWCEGEIDRL 132
            + YI WCE EI+RL
Sbjct: 984  HNYIGWCEVEIERL 997


>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score = 95.1 bits (235), Expect(2) = 1e-23
 Identities = 44/82 (53%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGED--KEITRTL 391
            HFARECP++KR+ KR+ +FE L++P+D +++SV +GE+ SD I+S+SEGED   E+ R+L
Sbjct: 823  HFARECPNDKRSSKRMAMFENLEIPEDCDIVSVEEGEDMSDAIYSISEGEDGADELQRSL 882

Query: 390  KACMQEEFIYMLGEVDGGYRPQ 325
            +     E + MLGE+DGGYRPQ
Sbjct: 883  QTL---EIVLMLGEIDGGYRPQ 901



 Score = 42.7 bits (99), Expect(2) = 1e-23
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHL+RNK+CKC+LCGQEG
Sbjct: 805 KHLVRNKRCKCFLCGQEG 822



 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 38/74 (51%), Positives = 51/74 (68%)
 Frame = -2

Query: 353  ERSMGVTGPRAYSNQKARIHGQECQVTACNLCGPYYFKEEVPVAPSPSAQFFSQNLIREQ 174
            +R++  +  R  S ++ARIH   C +TACNLCGPYY K EVPV P+PS     + +I+EQ
Sbjct: 924  QRAVHCSFCRRESIKRARIHCPLCLLTACNLCGPYYLKIEVPVEPAPSTPINPRRIIQEQ 983

Query: 173  NYYIIWCEGEIDRL 132
            + YI WCE EI+RL
Sbjct: 984  HNYIGWCEVEIERL 997


>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score = 95.1 bits (235), Expect(2) = 1e-23
 Identities = 44/82 (53%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGED--KEITRTL 391
            HFARECP++KR+ KR+ +FE L++P+D +++SV +GE+ SD I+S+SEGED   E+ R+L
Sbjct: 823  HFARECPNDKRSSKRMAMFENLEIPEDCDIVSVEEGEDMSDAIYSISEGEDGADELQRSL 882

Query: 390  KACMQEEFIYMLGEVDGGYRPQ 325
            +     E + MLGE+DGGYRPQ
Sbjct: 883  QTL---EIVLMLGEIDGGYRPQ 901



 Score = 42.7 bits (99), Expect(2) = 1e-23
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHL+RNK+CKC+LCGQEG
Sbjct: 805 KHLVRNKRCKCFLCGQEG 822



 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 38/74 (51%), Positives = 51/74 (68%)
 Frame = -2

Query: 353  ERSMGVTGPRAYSNQKARIHGQECQVTACNLCGPYYFKEEVPVAPSPSAQFFSQNLIREQ 174
            +R++  +  R  S ++ARIH   C +TACNLCGPYY K EVPV P+PS     + +I+EQ
Sbjct: 924  QRAVHCSFCRRESIKRARIHCPLCLLTACNLCGPYYLKIEVPVEPAPSTPINPRRIIQEQ 983

Query: 173  NYYIIWCEGEIDRL 132
            + YI WCE EI+RL
Sbjct: 984  HNYIGWCEVEIERL 997


>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score = 93.6 bits (231), Expect(2) = 4e-23
 Identities = 43/82 (52%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGED--KEITRTL 391
            HFAR+CP++KR+ KR+ +FE L++P+D +++SV +GE+ SD I+S+SEGED   E+ R+L
Sbjct: 823  HFARKCPNDKRSSKRMAMFENLEIPEDCDIVSVEEGEDMSDAIYSISEGEDGADELQRSL 882

Query: 390  KACMQEEFIYMLGEVDGGYRPQ 325
            +     E + MLGE+DGGYRPQ
Sbjct: 883  QTL---EIVLMLGEIDGGYRPQ 901



 Score = 42.7 bits (99), Expect(2) = 4e-23
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHL+RNK+CKC+LCGQEG
Sbjct: 805 KHLVRNKRCKCFLCGQEG 822



 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 38/74 (51%), Positives = 51/74 (68%)
 Frame = -2

Query: 353  ERSMGVTGPRAYSNQKARIHGQECQVTACNLCGPYYFKEEVPVAPSPSAQFFSQNLIREQ 174
            +R++  +  R  S ++ARIH   C +TACNLCGPYY K EVPV P+PS     + +I+EQ
Sbjct: 924  QRAVHCSFCRRESIKRARIHCPLCLLTACNLCGPYYLKIEVPVEPAPSTPINPRRIIQEQ 983

Query: 173  NYYIIWCEGEIDRL 132
            + YI WCE EI+RL
Sbjct: 984  HNYIGWCEVEIERL 997


>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
 gb|AEF56561.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score = 92.4 bits (228), Expect(2) = 8e-23
 Identities = 42/82 (51%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGED--KEITRTL 391
            HFAR+CP++KR+ KR+ +FE L++P+D +++SV +GE+ SD I+S+SEGED   E+ ++L
Sbjct: 823  HFARKCPNDKRSSKRMAMFENLEIPEDCDIVSVEEGEDMSDAIYSISEGEDGADELQKSL 882

Query: 390  KACMQEEFIYMLGEVDGGYRPQ 325
            +     E + MLGE+DGGYRPQ
Sbjct: 883  QTL---EIVLMLGEIDGGYRPQ 901



 Score = 42.7 bits (99), Expect(2) = 8e-23
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHL+RNK+CKC+LCGQEG
Sbjct: 805 KHLVRNKRCKCFLCGQEG 822



 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 38/74 (51%), Positives = 51/74 (68%)
 Frame = -2

Query: 353  ERSMGVTGPRAYSNQKARIHGQECQVTACNLCGPYYFKEEVPVAPSPSAQFFSQNLIREQ 174
            +R++  +  R  S ++ARIH   C +TACNLCGPYY K EVPV P+PS     + +I+EQ
Sbjct: 924  QRAVHCSFCRRESIKRARIHCPLCLLTACNLCGPYYLKIEVPVEPAPSTPINPRRIIQEQ 983

Query: 173  NYYIIWCEGEIDRL 132
            + YI WCE EI+RL
Sbjct: 984  HNYIGWCEVEIERL 997


>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
 gb|AHI90954.1| polyprotein [Hibiscus bacilliform virus GD1]
          Length = 1892

 Score = 75.5 bits (184), Expect(3) = 1e-22
 Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 8/83 (9%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGEDKEITRTLKA 385
            HFARECP++K+N +R+ ++E L++P+ FEV+SV +GE  SD IFS+SE ED++   T  A
Sbjct: 846  HFARECPNDKKNTRRVAMYEQLNIPEGFEVVSVEEGEEVSDAIFSISENEDEDALHTGGA 905

Query: 384  CMQEEF--------IYMLGEVDG 340
              +  F        +Y  G+ DG
Sbjct: 906  FAETIFMFHEGTDNVYWAGKKDG 928



 Score = 40.4 bits (93), Expect(3) = 1e-22
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHL+RNK+CKCYLCG+ G
Sbjct: 828 KHLVRNKRCKCYLCGEMG 845



 Score = 38.9 bits (89), Expect(3) = 1e-22
 Identities = 17/63 (26%), Positives = 35/63 (55%)
 Frame = -2

Query: 317  SNQKARIHGQECQVTACNLCGPYYFKEEVPVAPSPSAQFFSQNLIREQNYYIIWCEGEID 138
            + ++ R+H  +C++T+C LC   Y    +   P  ++ F  ++L+ +Q  YI +   EI 
Sbjct: 967  TRRRMRLHCPKCRITSCVLCSSNYCGIAIKPEPVQTSFFNEKSLLTQQQEYIAYQTAEIK 1026

Query: 137  RLK 129
            +L+
Sbjct: 1027 KLQ 1029


>gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1921

 Score = 89.0 bits (219), Expect(2) = 3e-20
 Identities = 40/78 (51%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGE-DKEITRTLK 388
            HFARECP++KRN+KR+ +FE L+VPDD E++SV +G+NQSD I+SVSEGE   ++ + + 
Sbjct: 937  HFARECPNDKRNIKRVAVFEGLEVPDDCEIVSVQEGDNQSDAIYSVSEGEVADDVQQGVN 996

Query: 387  ACMQEEFIYMLGEVDGGY 334
              +Q+E +Y L + D  Y
Sbjct: 997  VFIQKETLYYLRQEDNAY 1014



 Score = 37.7 bits (86), Expect(2) = 3e-20
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHL+R K+CKC+LCG EG
Sbjct: 919 KHLMREKRCKCFLCGNEG 936


>gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1921

 Score = 89.0 bits (219), Expect(2) = 3e-20
 Identities = 40/78 (51%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGE-DKEITRTLK 388
            HFARECP++KRN+KR+ +FE L+VPDD E++SV +G+NQSD I+SVSEGE   ++ + + 
Sbjct: 937  HFARECPNDKRNIKRVAVFEGLEVPDDCEIVSVQEGDNQSDAIYSVSEGEVADDVQQGVN 996

Query: 387  ACMQEEFIYMLGEVDGGY 334
              +Q+E +Y L + D  Y
Sbjct: 997  VFIQKETLYYLRQEDNAY 1014



 Score = 37.7 bits (86), Expect(2) = 3e-20
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHL+R K+CKC+LCG EG
Sbjct: 919 KHLMREKRCKCFLCGNEG 936


>gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1919

 Score = 89.0 bits (219), Expect(2) = 3e-20
 Identities = 40/78 (51%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGE-DKEITRTLK 388
            HFARECP++KRN+KR+ +FE L+VPDD E++SV +G+NQSD I+SVSEGE   ++ + + 
Sbjct: 935  HFARECPNDKRNIKRVAVFEGLEVPDDCEIVSVQEGDNQSDAIYSVSEGEVADDVQQGVN 994

Query: 387  ACMQEEFIYMLGEVDGGY 334
              +Q+E +Y L + D  Y
Sbjct: 995  VFIQKETLYYLRQEDNAY 1012



 Score = 37.7 bits (86), Expect(2) = 3e-20
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHL+R K+CKC+LCG EG
Sbjct: 917 KHLMREKRCKCFLCGNEG 934


>gb|APB42235.1| ORF3 [Dioscorea bacilliform virus]
          Length = 1897

 Score = 86.3 bits (212), Expect(2) = 3e-19
 Identities = 39/78 (50%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGE-DKEITRTLK 388
            HFARECP++KRN+KR+ +FE L++P+D E++SVH+G++ SD I+SVSEGE ++EI + + 
Sbjct: 930  HFARECPNDKRNIKRVAVFEGLEIPEDCEIVSVHEGDDLSDAIYSVSEGENNEEIDQGVN 989

Query: 387  ACMQEEFIYMLGEVDGGY 334
              +  E +Y L E D  Y
Sbjct: 990  VFINRETLYYLREEDHTY 1007



 Score = 37.0 bits (84), Expect(2) = 3e-19
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHL+R ++CKC+LCG EG
Sbjct: 912 KHLVRERRCKCFLCGAEG 929


>ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus]
 gb|ABI47983.1| ORF3 protein [Dioscorea bacilliform SN virus]
          Length = 1887

 Score = 82.8 bits (203), Expect(2) = 4e-19
 Identities = 48/120 (40%), Positives = 69/120 (57%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGEDKEITRTLKA 385
            HFARECP++KRNVKRI IFE +++P+D E++SV +G+  SD IFSVSEGE  E+ ++L  
Sbjct: 935  HFARECPNDKRNVKRIAIFEGMEIPEDCEIVSVQEGDELSDSIFSVSEGE--EVLQSLNP 992

Query: 384  CMQEEFIYMLGEVDGGYRPQSLF*PEGKDPWSRMPSNSVQPMRSILLQGGGSRSAISVSP 205
             +Q+  +Y + E DG +                             L GGG R+A+ V+P
Sbjct: 993  FIQQNLLY-IREEDGKH----------------------------FLGGGGWRAAVQVTP 1023



 Score = 40.0 bits (92), Expect(2) = 4e-19
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHLIR+KKCKC+LCG EG
Sbjct: 917 KHLIRSKKCKCFLCGAEG 934


>gb|ABI47986.1| ORF3 protein [Dioscorea bacilliform virus]
          Length = 1295

 Score = 82.8 bits (203), Expect(2) = 4e-19
 Identities = 48/120 (40%), Positives = 69/120 (57%)
 Frame = -1

Query: 564  HFARECPSEKRNVKRIVIFE*LDVPDDFEVLSVHDGENQSDVIFSVSEGEDKEITRTLKA 385
            HFARECP++KRNVKRI IFE +++P+D E++SV +G+  SD IFSVSEGE  E+ ++L  
Sbjct: 935  HFARECPNDKRNVKRIAIFEGMEIPEDCEIVSVQEGDELSDSIFSVSEGE--EVLQSLNP 992

Query: 384  CMQEEFIYMLGEVDGGYRPQSLF*PEGKDPWSRMPSNSVQPMRSILLQGGGSRSAISVSP 205
             +Q+  +Y + E DG +                             L GGG R+A+ V+P
Sbjct: 993  FIQQNLLY-IREEDGKH----------------------------FLGGGGWRAAVQVTP 1023



 Score = 40.0 bits (92), Expect(2) = 4e-19
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -2

Query: 617 KHLIRNKKCKCYLCGQEG 564
           KHLIR+KKCKC+LCG EG
Sbjct: 917 KHLIRSKKCKCFLCGAEG 934