BLASTX nr result

ID: Cheilocostus21_contig00060888 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00060888
         (537 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010263714.1| PREDICTED: uncharacterized protein LOC104601...    48   7e-07
gb|OIT33011.1| abc transporter c family member 2 [Nicotiana atte...    49   6e-06

>ref|XP_010263714.1| PREDICTED: uncharacterized protein LOC104601908 [Nelumbo nucifera]
          Length = 287

 Score = 47.8 bits (112), Expect(2) = 7e-07
 Identities = 24/60 (40%), Positives = 35/60 (58%)
 Frame = +2

Query: 335 TISYIYCQHAEVKCYFV*GVVISKQILTPFTKSYD*LIDIFTKSFPLTRFHIIYDKLSMY 514
           T+ +   +H EV C FV   V+S +I+TP+ K  D L+D+FTK     R   I +KL +Y
Sbjct: 222 TVYHERTKHIEVDCNFVREKVVSGEIITPYVKFEDQLVDLFTKGLWCARMKYICNKLELY 281



 Score = 33.1 bits (74), Expect(2) = 7e-07
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = +3

Query: 129 DHISILVFYLMLVGTLLFSLQEKKLNIVARSNCEAD 236
           D  S   +Y  L G L+   + KKLN+VARSN EA+
Sbjct: 180 DRKSATAYYTFLAGNLII-WKSKKLNVVARSNAEAE 214


>gb|OIT33011.1| abc transporter c family member 2 [Nicotiana attenuata]
          Length = 2326

 Score = 48.9 bits (115), Expect(2) = 6e-06
 Identities = 27/58 (46%), Positives = 34/58 (58%)
 Frame = +2

Query: 356 QHAEVKCYFV*GVVISKQILTPFTKSYD*LIDIFTKSFPLTRFHIIYDKLSMYLYSSL 529
           +H E+ C+FV   ++S  I T F KS D L DIFTKS    R   I +KL  YLY +L
Sbjct: 803 KHIEIDCHFVREKLLSGDIATKFVKSNDQLADIFTKSLIGPRISYICNKLDAYLYVNL 860



 Score = 28.5 bits (62), Expect(2) = 6e-06
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 9/47 (19%)
 Frame = +3

Query: 153 YLMLVGTLLFSLQEKKLNIVARSNCEADIE---------LWLKTIEK 266
           Y +LV   L S + KK N+VARS+ EA+           +W+K + K
Sbjct: 724 YCVLVEGNLVSWKSKKQNVVARSSAEAEYRAMAMATCELIWIKQLLK 770


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