BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00060747
         (480 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMO59210.1| Integrase, catalytic core [Corchorus capsularis]        65   3e-09
gb|OMO51796.1| Reverse transcriptase, RNA-dependent DNA polymera...    64   9e-09
gb|OMO94644.1| Integrase, catalytic core [Corchorus capsularis]        64   1e-08
gb|OMO99089.1| Integrase, catalytic core [Corchorus capsularis]        61   7e-08
gb|PNX69237.1| hypothetical protein L195_g056606, partial [Trifo...    55   4e-06
gb|PKI56506.1| hypothetical protein CRG98_023144 [Punica granatum]     56   5e-06
gb|PKI64687.1| hypothetical protein CRG98_014903 [Punica granatum]     55   5e-06
gb|PKI68495.1| hypothetical protein CRG98_011133 [Punica granatum]     55   1e-05

>gb|OMO59210.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 855

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 31/61 (50%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
 Frame = +2

Query: 299 YIKRYYRIIKQE*KEGKTKKDSEENSVITIIFG-QEIVSLIRGHSDCNHISVPSIE*MVD 475
           ++KR  +++KQE K+GK+KK+SEE S +T++   +E VSLI GH DCNH++ PS E +VD
Sbjct: 89  HLKRNCKLLKQERKDGKSKKNSEEESNVTVVVSDEETVSLICGHGDCNHVTDPSNEWIVD 148

Query: 476 S 478
           +
Sbjct: 149 T 149


>gb|OMO51796.1| Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
           capsularis]
          Length = 1500

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 31/110 (28%)
 Frame = +3

Query: 39  LSDY*DLLNQLTTMEINLNDKVTVLFLLGSLTNNWDTLVVIVINSAP-K*V*VQ------ 197
           LSDY ++LN L TM+I+L ++V VLFLLGS+  +WDTLVV V NSAP K V ++      
Sbjct: 402 LSDYQEMLNLLLTMKIDLGEEVNVLFLLGSMPESWDTLVVTVTNSAPDKKVTMKMAKDAL 461

Query: 198 ------------------------RAQSRSQDYRSHNKLKNKSKYKEPMK 275
                                   R++ + Q +R  +K KN+SK ++ +K
Sbjct: 462 LNEEARRTNRESGSNQALVTQNRGRSREKGQGFRGRSKSKNRSKSRDSVK 511


>gb|OMO94644.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1393

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 31/59 (52%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
 Frame = +2

Query: 305  KRYYRIIKQE*KEGKTKKDSEENSVITIIFG-QEIVSLIRGHSDCNHISVPSIE*MVDS 478
            +R  +++KQE K+GK+KK+SEE S +T++   +E VSLI GH DCNH+  PSIE +VD+
Sbjct: 899  QRNCKLLKQERKDGKSKKNSEEESNVTVVVSDEETVSLICGHGDCNHVVDPSIEWIVDT 957


>gb|OMO99089.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 572

 Score = 61.2 bits (147), Expect = 7e-08
 Identities = 30/55 (54%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
 Frame = +2

Query: 317 RIIKQE*KEGKTKKDSEENSVITIIFG-QEIVSLIRGHSDCNHISVPSIE*MVDS 478
           +++K E K GKTKK+SEE S +T++   +E VSLI GH DCNH++ PSIE +VD+
Sbjct: 15  KLLKLERKYGKTKKNSEEESNVTVVVSDEEAVSLICGHGDCNHVADPSIEWIVDT 69


>gb|PNX69237.1| hypothetical protein L195_g056606, partial [Trifolium pratense]
          Length = 208

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = +3

Query: 39  LSDY*DLLNQLTTMEINLNDKVTVLFLLGSLTNNWDTLVVIVINSAPK 182
           LSD+  L+NQLT M++ L D++  L LL SL +NWDTLVV + NSAP+
Sbjct: 68  LSDFQRLINQLTNMKMVLEDELQALLLLSSLPDNWDTLVVSLSNSAPQ 115


>gb|PKI56506.1| hypothetical protein CRG98_023144 [Punica granatum]
          Length = 530

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 25/47 (53%), Positives = 37/47 (78%)
 Frame = +3

Query: 39  LSDY*DLLNQLTTMEINLNDKVTVLFLLGSLTNNWDTLVVIVINSAP 179
           +S++ D++NQLT +EI L D++    LLG+L +NWDTLVV++ NSAP
Sbjct: 5   MSNFQDIVNQLTNLEIILPDELQACLLLGTLPDNWDTLVVVLSNSAP 51


>gb|PKI64687.1| hypothetical protein CRG98_014903 [Punica granatum]
          Length = 209

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%)
 Frame = +3

Query: 39  LSDY*DLLNQLTTMEINLNDKVTVLFLLGSLTNNWDTLVVIVINSAP 179
           +S++ D++NQLT +EI L D++    LLG+L +NWDTLVV + NSAP
Sbjct: 121 MSNFQDIINQLTNLEIILPDELQACLLLGTLPDNWDTLVVALSNSAP 167


>gb|PKI68495.1| hypothetical protein CRG98_011133 [Punica granatum]
          Length = 312

 Score = 54.7 bits (130), Expect = 1e-05
 Identities = 25/47 (53%), Positives = 36/47 (76%)
 Frame = +3

Query: 39  LSDY*DLLNQLTTMEINLNDKVTVLFLLGSLTNNWDTLVVIVINSAP 179
           +S++ D++NQLT +EI L D++    LLG+L +NWDTLVV + NSAP
Sbjct: 5   ISNFQDIINQLTNLEIILPDELQACLLLGTLPDNWDTLVVALSNSAP 51