BLASTX nr result
ID: Cheilocostus21_contig00060704
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00060704
(483 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP32069.1| Retrovirus-related Pol polyprotein from transposo... 54 1e-06
gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposo... 55 2e-06
gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposo... 55 2e-06
gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposo... 55 2e-06
gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposo... 55 2e-06
gb|PKU61775.1| Retrovirus-related Pol polyprotein from transposo... 52 3e-06
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 54 4e-06
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 54 4e-06
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 54 4e-06
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 54 4e-06
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 54 5e-06
emb|CAA69272.1| lectin receptor kinase, partial [Arabidopsis tha... 54 5e-06
gb|PKU78070.1| Retrovirus-related Pol polyprotein from transposo... 53 9e-06
>gb|KYP32069.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 954
Score = 53.9 bits (128), Expect(2) = 1e-06
Identities = 31/64 (48%), Positives = 37/64 (57%)
Frame = -3
Query: 193 DDFITKTWSYLLKEKLETL*VFKRFKG*VRN*CGILFKALRSDH*GESILQVF*FFLQEN 14
DDF KTW Y LKEK E FK+FK V G+L KALRSD GE + F + ++N
Sbjct: 487 DDFSRKTWVYFLKEKSEVFENFKKFKDNVEKENGLLIKALRSDRGGEFTSKEFQKYCEDN 546
Query: 13 DI*R 2
I R
Sbjct: 547 GIRR 550
Score = 25.8 bits (55), Expect(2) = 1e-06
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 297 LFHIDICGLVFPSSYGDYCFFYF 229
L H D+CG + P S G +F F
Sbjct: 462 LIHTDVCGPIKPRSLGKSNYFLF 484
>gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1342
Score = 55.1 bits (131), Expect(2) = 2e-06
Identities = 31/64 (48%), Positives = 37/64 (57%)
Frame = -3
Query: 193 DDFITKTWSYLLKEKLETL*VFKRFKG*VRN*CGILFKALRSDH*GESILQVF*FFLQEN 14
DDF KTW Y LKEK E FK+FK V G+L KALRSD GE + F + ++N
Sbjct: 552 DDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDN 611
Query: 13 DI*R 2
I R
Sbjct: 612 GIRR 615
Score = 23.9 bits (50), Expect(2) = 2e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 297 LFHIDICGLVFPSSYGDYCFF 235
L H D+CG + P S G +F
Sbjct: 527 LIHTDVCGPIKPRSLGKSNYF 547
>gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1342
Score = 55.1 bits (131), Expect(2) = 2e-06
Identities = 31/64 (48%), Positives = 37/64 (57%)
Frame = -3
Query: 193 DDFITKTWSYLLKEKLETL*VFKRFKG*VRN*CGILFKALRSDH*GESILQVF*FFLQEN 14
DDF KTW Y LKEK E FK+FK V G+L KALRSD GE + F + ++N
Sbjct: 552 DDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDN 611
Query: 13 DI*R 2
I R
Sbjct: 612 GIRR 615
Score = 23.9 bits (50), Expect(2) = 2e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 297 LFHIDICGLVFPSSYGDYCFF 235
L H D+CG + P S G +F
Sbjct: 527 LIHTDVCGPIKPRSLGKSNYF 547
>gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1331
Score = 55.1 bits (131), Expect(2) = 2e-06
Identities = 31/64 (48%), Positives = 37/64 (57%)
Frame = -3
Query: 193 DDFITKTWSYLLKEKLETL*VFKRFKG*VRN*CGILFKALRSDH*GESILQVF*FFLQEN 14
DDF KTW Y LKEK E FK+FK V G+L KALRSD GE + F + ++N
Sbjct: 541 DDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDN 600
Query: 13 DI*R 2
I R
Sbjct: 601 GIRR 604
Score = 23.9 bits (50), Expect(2) = 2e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 297 LFHIDICGLVFPSSYGDYCFF 235
L H D+CG + P S G +F
Sbjct: 516 LIHTDVCGPIKPRSLGKSNYF 536
>gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1033
Score = 55.1 bits (131), Expect(2) = 2e-06
Identities = 31/64 (48%), Positives = 37/64 (57%)
Frame = -3
Query: 193 DDFITKTWSYLLKEKLETL*VFKRFKG*VRN*CGILFKALRSDH*GESILQVF*FFLQEN 14
DDF KTW Y LKEK E FK+FK V G+L KALRSD GE + F + ++N
Sbjct: 486 DDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDN 545
Query: 13 DI*R 2
I R
Sbjct: 546 GIRR 549
Score = 23.9 bits (50), Expect(2) = 2e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 297 LFHIDICGLVFPSSYGDYCFF 235
L H D+CG + P S G +F
Sbjct: 461 LIHTDVCGPIKPRSLGKSNYF 481
>gb|PKU61775.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 267
Score = 52.0 bits (123), Expect(2) = 3e-06
Identities = 27/51 (52%), Positives = 30/51 (58%)
Frame = -3
Query: 205 VRHFDDFITKTWSYLLKEKLETL*VFKRFKG*VRN*CGILFKALRSDH*GE 53
+ DD+ KTW Y LKEK ET VFK+FK V G KALRSD GE
Sbjct: 206 ITFIDDYSRKTWVYFLKEKSETFNVFKKFKAMVEKTTGKFIKALRSDRGGE 256
Score = 26.6 bits (57), Expect(2) = 3e-06
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 297 LFHIDICGLVFPSSYGDYCFF 235
L H DICG + P S+ D +F
Sbjct: 185 LVHTDICGPITPESFSDKRYF 205
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 53.9 bits (128), Expect(2) = 4e-06
Identities = 28/64 (43%), Positives = 37/64 (57%)
Frame = -3
Query: 193 DDFITKTWSYLLKEKLETL*VFKRFKG*VRN*CGILFKALRSDH*GESILQVF*FFLQEN 14
DDF KTW Y LKEK E +FK+FK V G++ K +RSD GE + F + ++N
Sbjct: 554 DDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDN 613
Query: 13 DI*R 2
I R
Sbjct: 614 GIRR 617
Score = 24.3 bits (51), Expect(2) = 4e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 297 LFHIDICGLVFPSSYGDYCFF 235
L H D+CG + P S G +F
Sbjct: 529 LIHTDVCGPIKPKSLGKSNYF 549
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 53.9 bits (128), Expect(2) = 4e-06
Identities = 28/64 (43%), Positives = 37/64 (57%)
Frame = -3
Query: 193 DDFITKTWSYLLKEKLETL*VFKRFKG*VRN*CGILFKALRSDH*GESILQVF*FFLQEN 14
DDF KTW Y LKEK E +FK+FK V G++ K +RSD GE + F + ++N
Sbjct: 554 DDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDN 613
Query: 13 DI*R 2
I R
Sbjct: 614 GIRR 617
Score = 24.3 bits (51), Expect(2) = 4e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 297 LFHIDICGLVFPSSYGDYCFF 235
L H D+CG + P S G +F
Sbjct: 529 LIHTDVCGPIKPKSLGKSNYF 549
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 53.9 bits (128), Expect(2) = 4e-06
Identities = 28/64 (43%), Positives = 37/64 (57%)
Frame = -3
Query: 193 DDFITKTWSYLLKEKLETL*VFKRFKG*VRN*CGILFKALRSDH*GESILQVF*FFLQEN 14
DDF KTW Y LKEK E +FK+FK V G++ K +RSD GE + F + ++N
Sbjct: 554 DDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDN 613
Query: 13 DI*R 2
I R
Sbjct: 614 GIRR 617
Score = 24.3 bits (51), Expect(2) = 4e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 297 LFHIDICGLVFPSSYGDYCFF 235
L H D+CG + P S G +F
Sbjct: 529 LIHTDVCGPIKPKSLGKSNYF 549
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 53.9 bits (128), Expect(2) = 4e-06
Identities = 28/64 (43%), Positives = 37/64 (57%)
Frame = -3
Query: 193 DDFITKTWSYLLKEKLETL*VFKRFKG*VRN*CGILFKALRSDH*GESILQVF*FFLQEN 14
DDF KTW Y LKEK E +FK+FK V G++ K +RSD GE + F + ++N
Sbjct: 554 DDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDN 613
Query: 13 DI*R 2
I R
Sbjct: 614 GIRR 617
Score = 24.3 bits (51), Expect(2) = 4e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 297 LFHIDICGLVFPSSYGDYCFF 235
L H D+CG + P S G +F
Sbjct: 529 LIHTDVCGPIKPKSLGKSNYF 549
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1272
Score = 53.5 bits (127), Expect(2) = 5e-06
Identities = 28/64 (43%), Positives = 37/64 (57%)
Frame = -3
Query: 193 DDFITKTWSYLLKEKLETL*VFKRFKG*VRN*CGILFKALRSDH*GESILQVF*FFLQEN 14
DDF KTW Y LKEK E +FK+FK V G++ K +RSD GE + F + ++N
Sbjct: 554 DDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDN 613
Query: 13 DI*R 2
I R
Sbjct: 614 GIRR 617
Score = 24.3 bits (51), Expect(2) = 5e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 297 LFHIDICGLVFPSSYGDYCFF 235
L H D+CG + P S G +F
Sbjct: 529 LIHTDVCGPIKPKSLGKSNYF 549
>emb|CAA69272.1| lectin receptor kinase, partial [Arabidopsis thaliana]
Length = 623
Score = 53.5 bits (127), Expect(2) = 5e-06
Identities = 28/64 (43%), Positives = 37/64 (57%)
Frame = -3
Query: 193 DDFITKTWSYLLKEKLETL*VFKRFKG*VRN*CGILFKALRSDH*GESILQVF*FFLQEN 14
DDF KTW Y LKEK E +FK+FK V G++ K +RSD GE + F + ++N
Sbjct: 51 DDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDN 110
Query: 13 DI*R 2
I R
Sbjct: 111 GIRR 114
Score = 24.3 bits (51), Expect(2) = 5e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 297 LFHIDICGLVFPSSYGDYCFF 235
L H D+CG + P S G +F
Sbjct: 26 LIHTDVCGPIKPKSLGKSNYF 46
>gb|PKU78070.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 477
Score = 53.1 bits (126), Expect(2) = 9e-06
Identities = 29/64 (45%), Positives = 36/64 (56%)
Frame = -3
Query: 193 DDFITKTWSYLLKEKLETL*VFKRFKG*VRN*CGILFKALRSDH*GESILQVF*FFLQEN 14
DDF KTW Y LK+K E +FK+FK V G+ KA+RSD GE + F F + N
Sbjct: 351 DDFSRKTWVYFLKQKSEVFGIFKKFKAAVEKESGLKIKAMRSDRGGEFTSKEFQEFCEAN 410
Query: 13 DI*R 2
I R
Sbjct: 411 GIRR 414
Score = 23.9 bits (50), Expect(2) = 9e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 297 LFHIDICGLVFPSSYGDYCFF 235
L H D+CG + P S G +F
Sbjct: 326 LIHTDVCGPIKPCSLGKSNYF 346