BLASTX nr result

ID: Cheilocostus21_contig00060685 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00060685
         (801 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015168562.1| PREDICTED: uncharacterized protein LOC102604...    59   5e-07

>ref|XP_015168562.1| PREDICTED: uncharacterized protein LOC102604101 [Solanum tuberosum]
          Length = 1051

 Score = 59.3 bits (142), Expect(2) = 5e-07
 Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
 Frame = +1

Query: 103  PSPRYFKSY*GASVFAFLVQHWRSYL*GQYFPVRANQYSVN--IKNNNSFTPQCLWISKP 276
            P P Y K   G       ++ WRSYL GQ+F VR + YS+   ++      PQ  W++K 
Sbjct: 847  PLPAYEKELIG---LVKAIRQWRSYLWGQHFIVRTDHYSLKFLLEQKALTPPQQHWLAKI 903

Query: 277  LCCYFTIKY*VSHTINI*SRFSHRDQTNIMHMVVIMTQLSLVNSIEDEIQKDVQ*QELI 453
            L   F+++Y       +    S RD    M + + M QLSL + I +E Q     Q+LI
Sbjct: 904  LGYSFSVEYKAGRLNTVADALSRRDNDEAMLLAISMPQLSLFDDIRNEQQNSPDVQQLI 962



 Score = 23.5 bits (49), Expect(2) = 5e-07
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +2

Query: 500  DNLLLHKAQIFLSTHSPLKQAMIVTKNN 583
            + LLL+K + FL+++SP  Q ++   +N
Sbjct: 978  NGLLLYKHRTFLASNSPSIQTVMTALHN 1005


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