BLASTX nr result

ID: Cheilocostus21_contig00060668 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00060668
         (601 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZM86127.1| hypothetical protein DCAR_026451 [Daucus carota s...    62   3e-08
ref|XP_017220611.1| PREDICTED: L10-interacting MYB domain-contai...    62   7e-08
gb|ABB83643.1| PIF-like orf1 [Daucus carota]                           60   5e-07

>gb|KZM86127.1| hypothetical protein DCAR_026451 [Daucus carota subsp. sativus]
          Length = 210

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 34/102 (33%), Positives = 56/102 (54%)
 Frame = -3

Query: 461 NSNKSGKRKIRS*SVSKLRDDIHLLNHSIKQRTLIEKQIIESSRCSVREAIRELQFIPEV 282
           N+   GK++  S   SKLR DI  L  ++++R+ I +       C+++E + +L  IP+V
Sbjct: 107 NTKDKGKKQRMS-GASKLRSDISKLVETVEKRSGISEV-----GCTIKEVMDDLHAIPDV 160

Query: 281 V*DVLFFNFVTKLLEQKTKRAIWAKLNTLESKLSWLNYHYEE 156
             +   + F   + EQK KR +W  L T E+K+ WL Y  E+
Sbjct: 161 PKNTELYYFAVTMFEQKAKRELWKHLETTEAKVGWLKYQKEQ 202


>ref|XP_017220611.1| PREDICTED: L10-interacting MYB domain-containing protein-like
           [Daucus carota subsp. sativus]
          Length = 329

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 34/102 (33%), Positives = 56/102 (54%)
 Frame = -3

Query: 461 NSNKSGKRKIRS*SVSKLRDDIHLLNHSIKQRTLIEKQIIESSRCSVREAIRELQFIPEV 282
           N+   GK++  S   SKLR DI  L  ++++R+ I +       C+++E + +L  IP+V
Sbjct: 226 NTKDKGKKQRMS-GASKLRSDISKLVETVEKRSGISEV-----GCTIKEVMDDLHAIPDV 279

Query: 281 V*DVLFFNFVTKLLEQKTKRAIWAKLNTLESKLSWLNYHYEE 156
             +   + F   + EQK KR +W  L T E+K+ WL Y  E+
Sbjct: 280 PKNTELYYFAVTMFEQKAKRELWKHLETTEAKVGWLKYQKEQ 321


>gb|ABB83643.1| PIF-like orf1 [Daucus carota]
          Length = 353

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 34/104 (32%), Positives = 57/104 (54%)
 Frame = -3

Query: 467 ATNSNKSGKRKIRS*SVSKLRDDIHLLNHSIKQRTLIEKQIIESSRCSVREAIRELQFIP 288
           +TN+   GK++  S   SKLR DI  L  ++++R+ I +        +++E + +L  IP
Sbjct: 248 STNAKDKGKKQRMS-GASKLRSDISKLVETVEKRSGISEV-----GYTIKEIMDDLHAIP 301

Query: 287 EVV*DVLFFNFVTKLLEQKTKRAIWAKLNTLESKLSWLNYHYEE 156
           +V  +   + F   + EQK KR +W  L T E+K+ WL Y  E+
Sbjct: 302 DVPKNTELYYFAVTMFEQKAKRELWKHLETTEAKVGWLKYQKEQ 345


Top