BLASTX nr result
ID: Cheilocostus21_contig00060410
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00060410
(1314 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL68641.1|AF458765_1 polyprotein [Oryza sativa Japonica Group] 62 7e-16
emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa Japonica Group] 62 9e-16
gb|ABA94354.1| retrotransposon protein, putative, unclassified [... 62 4e-14
emb|CAN74064.1| hypothetical protein VITISV_028146 [Vitis vinifera] 53 4e-13
gb|AAO20078.1| putative polyprotein [Oryza sativa Japonica Group] 59 1e-12
dbj|GAV87838.1| RVT_2 domain-containing protein, partial [Cephal... 52 1e-12
gb|OMO85296.1| Integrase, catalytic core [Corchorus capsularis] 58 1e-12
emb|CAN81362.1| hypothetical protein VITISV_013815 [Vitis vinifera] 53 2e-12
emb|CAN67120.1| hypothetical protein VITISV_017484 [Vitis vinifera] 53 2e-12
emb|CAN63081.1| hypothetical protein VITISV_016842 [Vitis vinifera] 52 3e-12
emb|CAN63637.1| hypothetical protein VITISV_038689 [Vitis vinifera] 52 3e-12
gb|PNY13477.1| retrovirus-related Pol polyprotein from transposo... 55 3e-12
gb|KYP52900.1| Retrovirus-related Pol polyprotein from transposo... 57 4e-12
gb|OMO90284.1| Integrase, catalytic core [Corchorus capsularis] 56 5e-12
emb|CAN70756.1| hypothetical protein VITISV_014702 [Vitis vinifera] 51 5e-12
emb|CAN67925.1| hypothetical protein VITISV_021168 [Vitis vinifera] 50 8e-12
dbj|GAU27876.1| hypothetical protein TSUD_159700 [Trifolium subt... 53 8e-12
emb|CAN81139.1| hypothetical protein VITISV_018760 [Vitis vinifera] 50 1e-11
emb|CAN78616.1| hypothetical protein VITISV_003658 [Vitis vinifera] 50 1e-11
emb|CAN66416.1| hypothetical protein VITISV_044133 [Vitis vinifera] 51 1e-11
>gb|AAL68641.1|AF458765_1 polyprotein [Oryza sativa Japonica Group]
Length = 1472
Score = 62.0 bits (149), Expect(2) = 7e-16
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = -3
Query: 838 IYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSS 659
I +Y SY SL TY AF SL+ IPK+ EA + D ++A+ +
Sbjct: 937 IANYVSYTSLSS------TYRAFVASLNSAIIPKDWKEAKQDPRWHQAMLDELEALEKNK 990
Query: 658 TWDLVTYLSCT*PIVYEWVYTIKNNPHGYIEKYN---MSPKIKSNL*VDYFETFS 503
TWDLV+Y + + +WVY +K NP G +E+Y ++ +DY ETF+
Sbjct: 991 TWDLVSYPNGKKVVNCKWVYAVKQNPDGKVERYKARLVAKGYSQTYGIDYDETFA 1045
Score = 52.0 bits (123), Expect(2) = 7e-16
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Frame = -2
Query: 482 QMDVKNTFLYGILIEEVYKV----ESSI*T*NKINRLK*IL-------RAWFQKFSQVAT 336
Q+DVKN FL+G L EEVY +++ T K+ RLK L RAWF +F +
Sbjct: 1069 QLDVKNAFLHGDLQEEVYMEIPPGFATLQTKGKVLRLKKSLYGLKQSPRAWFDRFRRAMC 1128
Query: 335 RSGL*CSKTDHLLFVHQSANGIIVRCHLCR*HSFIENDSKGILKVRKHLKRKFYIK 168
G DH +F H S + I + ND I +++++L ++F +K
Sbjct: 1129 AMGYKQCNGDHTVFYHHSGDHITILAVYVDDMIITGNDCSEITRLKQNLSKEFEVK 1184
>emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa Japonica Group]
Length = 1262
Score = 61.6 bits (148), Expect(2) = 9e-16
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = -3
Query: 838 IYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSS 659
I +Y SY SL TY AF SL+ IPK+ EA + D ++A+ +
Sbjct: 727 IANYVSYTSLSS------TYKAFVASLNSAIIPKDWKEAKQDPRWHQAMLDELEALEKNK 780
Query: 658 TWDLVTYLSCT*PIVYEWVYTIKNNPHGYIEKYN---MSPKIKSNL*VDYFETFS 503
TWDLV+Y + + +WVY +K NP G +E+Y ++ +DY ETF+
Sbjct: 781 TWDLVSYPNGKKVVNCKWVYAVKQNPDGKVERYKARLVAKGYSQTYGIDYDETFA 835
Score = 52.0 bits (123), Expect(2) = 9e-16
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Frame = -2
Query: 482 QMDVKNTFLYGILIEEVYKV----ESSI*T*NKINRLK*IL-------RAWFQKFSQVAT 336
Q+DVKN FL+G L EEVY +++ T K+ RLK L RAWF +F +
Sbjct: 859 QLDVKNAFLHGDLQEEVYMEIPPGFATLQTKGKVLRLKKSLYGLKQSPRAWFDRFRRAMC 918
Query: 335 RSGL*CSKTDHLLFVHQSANGIIVRCHLCR*HSFIENDSKGILKVRKHLKRKFYIK 168
G DH +F H S + I + ND I +++++L ++F +K
Sbjct: 919 AMGYKQCNGDHTVFYHHSGDHITILAVYVDDMIITGNDCSEITRLKQNLSKEFEVK 974
>gb|ABA94354.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 882
Score = 62.4 bits (150), Expect(2) = 4e-14
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = -3
Query: 838 IYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSS 659
I +Y SY SL TY AF SL + IPK+ EA + D ++A+ +
Sbjct: 516 ISNYVSYDSLSS------TYKAFVASLDSVQIPKDWREAKQDPRWHQAMLDELEALEKNK 569
Query: 658 TWDLVTYLSCT*PIVYEWVYTIKNNPHGYIEKYN---MSPKIKSNL*VDYFETFS 503
TWDLV + + Y+WVYT+K NP G +E+Y ++ +DY ETF+
Sbjct: 570 TWDLVPFPKGKKIVNYKWVYTVKQNPDGKVERYKARLVAKGYSQTYGIDYDETFA 624
Score = 45.4 bits (106), Expect(2) = 4e-14
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Frame = -2
Query: 482 QMDVKNTFLYGILIEEVYKVE----SSI*T*NKINRLK*IL-------RAWFQKFSQVAT 336
Q+DVKN FL+G L EEVY ++ T K+ RLK L RAWF +F +
Sbjct: 648 QLDVKNAFLHGDLQEEVYMDVPPGFATSQTKGKVLRLKKSLYGLKQSPRAWFDRFRRAMC 707
Query: 335 RSGL*CSKTDHLLFVHQSANGIIVRCHLCR*HSFIENDSKGILKVRKHLKRKFYIK 168
DH +F H + I + ND I +++++L ++F +K
Sbjct: 708 AMDYKQCNGDHTVFYHHCGDHITILAVYVDDMIITGNDCLEITRLKRNLSKEFEVK 763
>emb|CAN74064.1| hypothetical protein VITISV_028146 [Vitis vinifera]
Length = 1203
Score = 53.1 bits (126), Expect(2) = 4e-13
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Frame = -2
Query: 485 FQMDVKNTFLYGILIEEVY---------KVESSI*T*NKINR----LK*ILRAWFQKFSQ 345
+Q+D+KN FLYG L EEVY + ES + +++R LK RAWF +FS
Sbjct: 797 YQLDIKNAFLYGDLAEEVYMEQPPSFVAQGESGLVC--RLHRSLYGLKHFSRAWFDRFSS 854
Query: 344 VATRSGL*CSKTDHLLFVHQSANGIIVRCHLCR*HSFIE-NDSKGILKVRKHLKRKFYIK 168
V G+ S TDH +F H ++ G + + I +D I K+++HL F K
Sbjct: 855 VVQEFGMLRSTTDHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDDIQKLKQHLFTHFQTK 914
Score = 51.6 bits (122), Expect(2) = 4e-13
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Frame = -3
Query: 829 YSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSSTWD 650
YS SL Y AF ++S + +PK+ EA+ D MDA+ ++ TWD
Sbjct: 663 YSEKYSLYSYHRLSSPYSAFVSAISSVSLPKSTHEALSHPGWRQAMVDEMDALHSNGTWD 722
Query: 649 LVTYLSCT*PIVYEWVYTIKNNPHGYIEKYNMSPKIKSNL*V---DYFETFS 503
LV S + WVY +K P G +++ K V DY +TFS
Sbjct: 723 LVVLPSGKSTVGCRWVYAVKVGPDGQVDRLKARLVAKGYTQVYGSDYGDTFS 774
>gb|AAO20078.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1299
Score = 58.9 bits (141), Expect(2) = 1e-12
Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Frame = -3
Query: 838 IYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSS 659
I +Y SY SL TY AF SL + IPK+ EA + D ++A+ +
Sbjct: 764 ISNYVSYDSLSS------TYKAFIASLDSVQIPKDWREAKQDPRWHQAMLDELEALEKNK 817
Query: 658 TWDLVTYLSCT*PIVYEWVYTIKNNPHGYIEKYN---MSPKIKSNL*VDYFETFS 503
TWDLV + + +WVYT+K NP G +E+Y ++ +DY ETF+
Sbjct: 818 TWDLVPFPKGKKIVNCKWVYTVKQNPDGKVERYKARLVAKGYSQTYGIDYDETFA 872
Score = 44.3 bits (103), Expect(2) = 1e-12
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Frame = -2
Query: 482 QMDVKNTFLYGILIEEVYKVE----SSI*T*NKINRLK*IL-------RAWFQKFSQVAT 336
Q+DVKN FL+ L EEVY ++ T K+ RLK L RAWF +F +
Sbjct: 896 QLDVKNAFLHRDLQEEVYMDVPPGFATSQTKGKVLRLKKSLYGLKQSPRAWFDRFRRAMC 955
Query: 335 RSGL*CSKTDHLLFVHQSANGIIVRCHLCR*HSFIENDSKGILKVRKHLKRKFYIK 168
DH +F H S + I + ND I +++++L ++F +K
Sbjct: 956 AMDYKQCNGDHTVFYHHSGDHITILAVYVDDMIITGNDCLEITRLKRNLSKEFEVK 1011
>dbj|GAV87838.1| RVT_2 domain-containing protein, partial [Cephalotus follicularis]
Length = 555
Score = 52.4 bits (124), Expect(2) = 1e-12
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = -2
Query: 485 FQMDVKNTFLYGILIEEVYKVESSI*T-----*NKINRLK*ILRAWFQKFSQVATRSGL* 321
FQ+D+KN FLYG L EE Y + T I LK RAWF+KFS G
Sbjct: 157 FQLDIKNAFLYGDLSEEGYVAQRENETRVCRLQKAIYGLKQSPRAWFEKFSATVLSCGFS 216
Query: 320 CSKTDHLLFVHQSANGIIVRCHLCR*HSFIENDSKGILKVRKHLKRKFYIK 168
+DH +FV + ++V +D GI++V+ +L++ F K
Sbjct: 217 QCYSDHSVFVRRHNGKLVVLVVYVDDIIVSGDDVTGIIEVKSYLQQHFQTK 267
Score = 50.8 bits (120), Expect(2) = 1e-12
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Frame = -3
Query: 841 MIYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITS 662
+IY +Y+S+ L + HA LSLS +PK E + + +DA+++
Sbjct: 22 LIYSIDNYVSISHLP---SSVHALALSLSTTSLPKTYVEGLHIPGWKEAMDVEIDALLSR 78
Query: 661 STWDLVTYLSCT*PIVYEWVYTIKNNPHGYIEKYNMSPKIKS---NL*VDYFETFS 503
+TW LV + WVYTIK +P +E+ K VDYFETFS
Sbjct: 79 NTWSLVDLPPGKDLVQCRWVYTIKYHPDESVERLKARLVAKGCTRTYGVDYFETFS 134
>gb|OMO85296.1| Integrase, catalytic core [Corchorus capsularis]
Length = 541
Score = 58.2 bits (139), Expect(2) = 1e-12
Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Frame = -2
Query: 482 QMDVKNTFLYGILIEEVYKVES---SI*T*NKINRLK*IL-------RAWFQKFSQVATR 333
QMDVKN FL G L EEVY S T N++ +L+ L RAWF+KFS
Sbjct: 324 QMDVKNAFLNGDLHEEVYMKPPPGLSCQT-NQVCKLRRALYGLKQAPRAWFEKFSSTMLD 382
Query: 332 SGL*CSKTDHLLFVHQSANGIIVRCHLCR*HSFIENDSKGILKVRKHLKRKFYIK 168
SG S D LF+ QS+ GI++ +D GI ++ HL R F +K
Sbjct: 383 SGFVQSAHDSTLFIRQSSRGIVLLLLYVDDMVITGDDDLGIKDIKNHLSRTFEMK 437
Score = 44.7 bits (104), Expect(2) = 1e-12
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = -3
Query: 787 ITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSSTWDLVTYLSCT*PIVYE 608
+ +H F ++ ++ PK+ EA L + + ++A+ + TWDLV + +
Sbjct: 203 LDFHCFLSTILSVYEPKSYHEACLDPLWQAAMKEELNALEKTHTWDLVELPVGKSVVDCK 262
Query: 607 WVYTIKNNPHGYIEKYN---MSPKIKSNL*VDYFETFS 503
WVY +K G +E+Y ++ +DY ETF+
Sbjct: 263 WVYKVKTKSDGSVERYKARLVAKGFTQEYGIDYEETFA 300
>emb|CAN81362.1| hypothetical protein VITISV_013815 [Vitis vinifera]
Length = 1535
Score = 52.8 bits (125), Expect(2) = 2e-12
Identities = 30/92 (32%), Positives = 46/92 (50%)
Frame = -3
Query: 838 IYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSS 659
IY++ SY L +Y AF +LS + PK+ EA+ D M A+ ++
Sbjct: 1239 IYNFLSYHRLSS------SYSAFVXTLSSVSFPKSTSEALSHPGWRQAMVDEMVALHSNG 1292
Query: 658 TWDLVTYLSCT*PIVYEWVYTIKNNPHGYIEK 563
TWDLV+ C + WVYT+K P G +++
Sbjct: 1293 TWDLVSLPPCKPTVGCRWVYTVKVGPDGQVDR 1324
Score = 49.3 bits (116), Expect(2) = 2e-12
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 12/118 (10%)
Frame = -2
Query: 485 FQMDVKNTFLYGILIEEVY---------KVESSI--*T*NKINRLK*ILRAWFQKFSQVA 339
+Q+D+KN FL+G L+EEVY + ES + + LK RAWF +F+ V
Sbjct: 1350 YQLDIKNAFLHGELLEEVYMEQPPSFVVQGESGLVCKLRXSLYGLKQSPRAWFGRFNSVV 1409
Query: 338 TRSGL*CSKTDHLLFVHQSANGIIVRCHLCR*HSFIE-NDSKGILKVRKHLKRKFYIK 168
G+ S+ +H +F H +++ + + I +D +GI ++++HL F K
Sbjct: 1410 QEFGMLXSEABHSVFYHHNSSSQCIYLVVYVDDIVITGSDQEGIQRLKQHLFNHFQTK 1467
>emb|CAN67120.1| hypothetical protein VITISV_017484 [Vitis vinifera]
Length = 1179
Score = 53.1 bits (126), Expect(2) = 2e-12
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = -3
Query: 838 IYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSS 659
IY++ SY L +Y AF +LS I++PK+ EA+ D M A+ ++
Sbjct: 676 IYNFLSYHRLFS------SYSAFVSTLSSIYLPKSTSEALSHPGWRQAMVDEMAALHSNG 729
Query: 658 TWDLVTYLSCT*PIVYEWVYTIKNNPHGYIE--KYNMSPKIKSNL-*VDYFETFS 503
TWDLV+ + WVYT+K P G ++ K + K+ + + DY +TFS
Sbjct: 730 TWDLVSLPLGKFTVGCRWVYTVKVGPDGQVDRLKARLVAKVYTQIYGCDYSDTFS 784
Score = 48.9 bits (115), Expect(2) = 2e-12
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 14/120 (11%)
Frame = -2
Query: 485 FQMDVKNTFLYGILIEEVY---------KVESSI*T*NKINR----LK*ILRAWFQKFSQ 345
+Q+D+KN FL+G +EE+Y + ES + K+ R LK RAWF FS
Sbjct: 807 YQLDIKNAFLHGEFLEELYMEQPPGFVAQGESGLVC--KLRRSLYGLKQSPRAWFGHFSS 864
Query: 344 VATRSGL*CSKTDHLLFVHQSANGIIVRCHLCR*HSFIE-NDSKGILKVRKHLKRKFYIK 168
V G+ S+ DH +F H +++ + + I+ +D +GI ++++HL F K
Sbjct: 865 VVQEFGMLRSEADHSVFYHHNSSSQCIYLVVYVDDIVIKGSDQEGIQRLKQHLFNHFQTK 924
>emb|CAN63081.1| hypothetical protein VITISV_016842 [Vitis vinifera]
Length = 1179
Score = 51.6 bits (122), Expect(2) = 3e-12
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Frame = -2
Query: 485 FQMDVKNTFLYGILIEE-----VYKVESSI*T*NKINRLK*ILRAWFQKFSQVATRSGL* 321
+Q+D+KN FL+G L EE V ++ S+ LK RAWF +FS V G+
Sbjct: 871 YQLDIKNVFLHGDLAEEGESGLVCRLRRSL------YGLKQSPRAWFSRFSSVVQEFGMF 924
Query: 320 CSKTDHLLFVHQSANGIIVRCHLCR*HSFIE-NDSKGILKVRKHLKRKFYIK 168
S DH +F H +++G + + I +D GI K+++HL F K
Sbjct: 925 RSTADHSVFYHHNSSGQCIYLVVYVDDIIITGSDQNGIQKLKQHLFTHFQTK 976
Score = 50.1 bits (118), Expect(2) = 3e-12
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = -3
Query: 838 IYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSS 659
IY++ SY L Y F ++SF+ +PK+ E + D M + ++
Sbjct: 740 IYNFLSYHQLSS------PYSTFVSAISFVSLPKSTPEVLSHPSWRQAMVDEMVVLHSNG 793
Query: 658 TWDLVTYLSCT*PIVYEWVYTIKNNPHGYIEKYNMSPKIKSNL*V---DYFETFS 503
TWDLV S + WVYT+K +P G +++ K V DY +TFS
Sbjct: 794 TWDLVVLPSGKSTVGCRWVYTVKVSPDGQVDRLKARLVAKGYTQVYGSDYGDTFS 848
>emb|CAN63637.1| hypothetical protein VITISV_038689 [Vitis vinifera]
Length = 601
Score = 51.6 bits (122), Expect(2) = 3e-12
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Frame = -2
Query: 485 FQMDVKNTFLYGILIEEVYKVESSI*T*NKINRLK*ILRAWFQKFSQVATRSGL*CSKTD 306
+Q+D+KN FL+G L+EEVY + + LK RAWF +FS G+ S+ D
Sbjct: 276 YQLDIKNVFLHGELLEEVYMEQPPGFLHRSLYGLKQSPRAWFGRFSSAVQEFGMLRSEAD 335
Query: 305 H-LLFVHQSANGIIVRCHLCR*HSFIENDSKGILKVRKHLKRKFYIK 168
H +++ + I++ ++D +GI ++++HL F K
Sbjct: 336 HSCIYLVVYVDDIVI----------TDSDQEGIQRLKQHLFNHFQTK 372
Score = 50.1 bits (118), Expect(2) = 3e-12
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Frame = -3
Query: 838 IYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSS 659
IY++ SY L +Y AF +LS + +PK+ E + L D M A+ ++
Sbjct: 145 IYNFLSYHRLSS------SYSAFVSTLSSVSLPKSTSETLSHLGWRQAMVDEMAALHSNG 198
Query: 658 TWDLVTYLSCT*PIVYEWVYTIKNNPHGYIEKYNMSPKIKSNL*V---DYFETFS 503
WDLV+ I WVYT+K P G +++ K + DY +TFS
Sbjct: 199 KWDLVSLPPGKSTIGCRWVYTVKVGPDGQVDRLKARLVAKGYTQIYGCDYDDTFS 253
>gb|PNY13477.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1100
Score = 55.1 bits (131), Expect(3) = 3e-12
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Frame = -3
Query: 862 P*LSKKVMIYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDH 683
P L KV Y S+Y+S L +Y +F LS I IP N+ EA+ +
Sbjct: 551 PDLQSKVK-YPISNYVSSHKLS---RSYASFVSQLSSISIPSNVQEALADPRWTEAMVEE 606
Query: 682 MDAIITSSTWDLVTYLSCT*PIVYEWVYTIKNNPHGYIEKYN---MSPKIKSNL*VDYFE 512
M A+ ++TWD+VT S + WV+TIK+ G +E+Y ++ + VDY E
Sbjct: 607 MAALEKNNTWDVVTLPSGKKTVGCRWVFTIKHKADGSVERYKARLVAKGYTQSYGVDYQE 666
Query: 511 TFS 503
TF+
Sbjct: 667 TFA 669
Score = 41.6 bits (96), Expect(3) = 3e-12
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Frame = -2
Query: 482 QMDVKNTFLYGILIEEVYK-----VESSI*T*N--KINRLK*IL-------RAWFQKFSQ 345
Q DVKN FL+G ++EE+Y + S+ N K+ +LK L RAWF +F++
Sbjct: 693 QFDVKNAFLHGEILEEIYMDSPPGMTDSMIDSNGMKVCKLKKALYGLKQSPRAWFGRFTK 752
Query: 344 VATRSGL*CSKTDHLLFVHQSANGIIVRCHLCR*HSFIENDSKGILKVRKHLKRKFYIK 168
G S DH LF+ + I ND I ++++L +F +K
Sbjct: 753 SMKAFGYRASNYDHTLFLKKGEGKITALIIYVDDMIVTGNDQDEISSLQRYLASEFEMK 811
Score = 24.3 bits (51), Expect(3) = 3e-12
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 1019 CPHQTSVVPPPEST 978
C H+T++ P PEST
Sbjct: 517 CLHETTITPNPEST 530
>gb|KYP52900.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 737
Score = 57.0 bits (136), Expect(2) = 4e-12
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Frame = -3
Query: 838 IYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSS 659
+Y ++YLS F T+ AF SL+ P ++ EA+ + M+A+ +S
Sbjct: 197 LYPLANYLSFRN---FSPTHKAFLTSLNTTTTPTSLSEALSDKKWKQAMDVEMEALEKNS 253
Query: 658 TWDLVTYLSCT*PIVYEWVYTIKNNPHGYIEKYN---MSPKIKSNL*VDYFETFS 503
TWDLV + P+ +WVYTIK G IE+Y ++ VDY ETF+
Sbjct: 254 TWDLVALPNGKKPVGCKWVYTIKYKADGSIERYKARLVAKGFTQTYGVDYMETFA 308
Score = 44.3 bits (103), Expect(2) = 4e-12
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 12/118 (10%)
Frame = -2
Query: 482 QMDVKNTFLYGILIEEVYKV-------ESSI*T*NKINR----LK*ILRAWFQKFSQVAT 336
Q DVKN FL+G + EE+Y +++ T K+ + LK RAWF +F++V
Sbjct: 332 QFDVKNAFLHGEIEEEIYMELPPGYGEKTAANTVCKLKKALYGLKQSPRAWFGRFTKVMI 391
Query: 335 RSGL*CSKTDHLLFV-HQSANGIIVRCHLCR*HSFIENDSKGILKVRKHLKRKFYIKS 165
G S+ DH LF+ H + G+ V +D + + +HL ++F IK+
Sbjct: 392 SLGFKQSQGDHTLFIKHSKSRGVTVLLVYVDDIIVTGDDEEEQRLLGQHLAKEFEIKT 449
>gb|OMO90284.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1323
Score = 56.2 bits (134), Expect(2) = 5e-12
Identities = 43/115 (37%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Frame = -2
Query: 482 QMDVKNTFLYGILIEEVYKVES---SI*T*NKINRLK*IL-------RAWFQKFSQVATR 333
QMDVKN FL G L EEVY S T N++ +L+ L RAWF+KFS
Sbjct: 950 QMDVKNVFLNGDLHEEVYMKPPPGLSCQT-NQVCKLRRALYGLKQAPRAWFEKFSSTMLD 1008
Query: 332 SGL*CSKTDHLLFVHQSANGIIVRCHLCR*HSFIENDSKGILKVRKHLKRKFYIK 168
SG S D LF+ QS+ GI++ +D G ++ HL R F +K
Sbjct: 1009 SGFVQSAHDSTLFIRQSSRGIVLLLLYVDDMVITGDDDLGTKDIKNHLSRTFEMK 1063
Score = 44.7 bits (104), Expect(2) = 5e-12
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = -3
Query: 787 ITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSSTWDLVTYLSCT*PIVYE 608
+ +H F ++ ++ PK+ EA L + + ++A+ + TWDLV + +
Sbjct: 829 LDFHCFLSTILSVYEPKSYHEACLDPLWQAAMKEELNALEKTHTWDLVELPVGKSVVDCK 888
Query: 607 WVYTIKNNPHGYIEKYN---MSPKIKSNL*VDYFETFS 503
WVY +K G +E+Y ++ +DY ETF+
Sbjct: 889 WVYKVKTKSDGSVERYKARLVAKGFTQEYGIDYEETFA 926
>emb|CAN70756.1| hypothetical protein VITISV_014702 [Vitis vinifera]
Length = 1212
Score = 51.2 bits (121), Expect(2) = 5e-12
Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 12/118 (10%)
Frame = -2
Query: 485 FQMDVKNTFLYGILIEEVY---------KVESSI*T*--NKINRLK*ILRAWFQKFSQVA 339
+Q+D+KN FL+G L EEVY + ES + + LK RAWF +FS V
Sbjct: 839 YQLDIKNVFLHGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRAWFSRFSSVV 898
Query: 338 TRSGL*CSKTDHLLFVHQSANG-IIVRCHLCR*HSFIENDSKGILKVRKHLKRKFYIK 168
G+ S DH +F H ++ G I I +D GI K+++HL F K
Sbjct: 899 QEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIVIIGSDQDGIXKLKQHLFTHFQTK 956
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = -3
Query: 838 IYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSS 659
IY++ SY L Y AF ++S + +PK+ EA+ D M A+ ++
Sbjct: 708 IYNFLSYHRLSS------PYSAFVSAISSVSLPKSTHEALSHPGWRQAMVDEMTALHSNG 761
Query: 658 TWDLVTYLSCT*PIVYEWVYTIKNNPHGYIEKYNMSPKIKSNL*V---DYFETFS 503
TWDLV S I WVY +K P G +++ K V DY +TFS
Sbjct: 762 TWDLVVLPSGKSTIGCRWVYAVKVGPDGQVDRLKARLVAKGYTQVYGSDYGDTFS 816
>emb|CAN67925.1| hypothetical protein VITISV_021168 [Vitis vinifera]
Length = 1354
Score = 50.4 bits (119), Expect(2) = 8e-12
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Frame = -2
Query: 485 FQMDVKNTFLYGILIEEVY---------KVESSI*T*--NKINRLK*ILRAWFQKFSQVA 339
+Q+D+KN FL+G L EEVY + ES + + LK RAWF +FS V
Sbjct: 928 YQLDIKNAFLHGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRAWFSRFSSVV 987
Query: 338 TRSGL*CSKTDHLLFVHQSANGIIVRCHLCR*HSFIE-NDSKGILKVRKHLKRKFYIK 168
G+ S DH +F H ++ G + + I +D GI K+++HL F K
Sbjct: 988 QEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTK 1045
Score = 49.7 bits (117), Expect(2) = 8e-12
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = -3
Query: 838 IYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSS 659
IY++ SY L Y AF ++S + +PK+ EA+ D M A+ ++
Sbjct: 797 IYNFLSYHRLSS------PYSAFISAISSVSLPKSTQEALSHPGWRQAMVDEMTALHSNG 850
Query: 658 TWDLVTYLSCT*PIVYEWVYTIKNNPHGYIEKYNMSPKIKSNL*V---DYFETFS 503
TWDLV S + WVY +K P G +++ K V DY +TFS
Sbjct: 851 TWDLVVLPSGKSTVGCRWVYAVKVGPDGQVDRLKARLVAKGYTQVYGSDYGDTFS 905
>dbj|GAU27876.1| hypothetical protein TSUD_159700 [Trifolium subterraneum]
Length = 1257
Score = 53.1 bits (126), Expect(2) = 8e-12
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 16/121 (13%)
Frame = -2
Query: 482 QMDVKNTFLYGILIEEVY---------KVESSI*T*NKINRLK*IL-------RAWFQKF 351
Q+D+KN FL+G L EEVY + ESS N + RL L RAWF +F
Sbjct: 797 QLDIKNAFLHGDLEEEVYMEQPPGFVAQGESS----NMVCRLHRSLYGLKQSPRAWFGRF 852
Query: 350 SQVATRSGL*CSKTDHLLFVHQSANGIIVRCHLCR*HSFIENDSKGILKVRKHLKRKFYI 171
S + + G+ S+ DH +F S G I +D +GIL+++++L +F
Sbjct: 853 STIVQQFGMIRSEADHSVFYRHSVQGCIYLIVYVDDIVITGSDQQGILQLKQYLSNQFQT 912
Query: 170 K 168
K
Sbjct: 913 K 913
Score = 47.0 bits (110), Expect(2) = 8e-12
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Frame = -3
Query: 820 YLSLCGLQ*FIITYHAFCLS-LSFIFIPKNIDEAILKLH*NSITNDHMDAIITSSTWDLV 644
Y+ LC + + H CLS LS + IPK+ EA+ D M A+ +S TW+LV
Sbjct: 666 YIDLCYSR--LSPLHYTCLSSLSSVSIPKSPGEALSHPDWRQAMIDEMCALQSSGTWELV 723
Query: 643 TYLSCT*PIVYEWVYTIKNNPHGYIEKYNMSPKIKSNL*V---DYFETFS 503
+ WVYT+K P G I+++ K + DY +TFS
Sbjct: 724 PLPPGKSLVGCRWVYTVKVGPDGKIDRFKARLVAKGYTQIFGLDYSDTFS 773
>emb|CAN81139.1| hypothetical protein VITISV_018760 [Vitis vinifera]
Length = 1403
Score = 50.4 bits (119), Expect(2) = 1e-11
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Frame = -2
Query: 485 FQMDVKNTFLYGILIEEVY---------KVESSI*T*--NKINRLK*ILRAWFQKFSQVA 339
+Q+D+KN FL+G L EEVY + ES + + LK RAWF +FS V
Sbjct: 1058 YQLDIKNVFLHGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRAWFSRFSSVV 1117
Query: 338 TRSGL*CSKTDHLLFVHQSANGIIVRCHLCR*HSFIE-NDSKGILKVRKHLKRKFYIK 168
G+ S DH +F H ++ G + + I +D GI K+++HL F K
Sbjct: 1118 QEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTK 1175
Score = 49.3 bits (116), Expect(2) = 1e-11
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = -3
Query: 838 IYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSS 659
IY++ SY L Y AF ++S + +PK+ EA+ D M A+ ++
Sbjct: 927 IYNFLSYHRLSS------PYSAFVSAISSVSLPKSTHEALSHPGWRQAMVDEMTALHSNG 980
Query: 658 TWDLVTYLSCT*PIVYEWVYTIKNNPHGYIEKYNMSPKIKSNL*V---DYFETFS 503
TWDLV S + WVY +K P G +++ K V DY +TFS
Sbjct: 981 TWDLVVLPSGKSTVGCRWVYAVKVGPDGQVDRLKARLVAKGYTQVYGSDYGDTFS 1035
>emb|CAN78616.1| hypothetical protein VITISV_003658 [Vitis vinifera]
Length = 2172
Score = 50.4 bits (119), Expect(2) = 1e-11
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Frame = -2
Query: 485 FQMDVKNTFLYGILIEEVY---------KVESSI*T*--NKINRLK*ILRAWFQKFSQVA 339
+Q+D+KN FL+G L EEVY + ES + + LK RAWF +FS V
Sbjct: 1604 YQLDIKNAFLHGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRAWFSRFSSVV 1663
Query: 338 TRSGL*CSKTDHLLFVHQSANGIIVRCHLCR*HSFIE-NDSKGILKVRKHLKRKFYIK 168
G+ S DH +F H ++ G + + I +D GI K+++HL F K
Sbjct: 1664 QEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTK 1721
Score = 48.9 bits (115), Expect(2) = 1e-11
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = -3
Query: 838 IYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSS 659
IY++ SY L Y AF ++S + +PK+ EA+ D M A+ ++
Sbjct: 1473 IYNFLSYHRLSS------PYSAFVSAISSVSLPKSTHEALSHPGWRQAMVDEMAALHSNG 1526
Query: 658 TWDLVTYLSCT*PIVYEWVYTIKNNPHGYIEKYNMSPKIKSNL*V---DYFETFS 503
TWDLV S + WVY +K P G +++ K V DY +TFS
Sbjct: 1527 TWDLVVLPSGKSTVGCRWVYAVKVGPDGQVDRLKARLVAKGYTQVYGSDYGDTFS 1581
>emb|CAN66416.1| hypothetical protein VITISV_044133 [Vitis vinifera]
Length = 1549
Score = 51.2 bits (121), Expect(2) = 1e-11
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Frame = -3
Query: 838 IYHYSSYLSLCGLQ*FIITYHAFCLSLSFIFIPKNIDEAILKLH*NSITNDHMDAIITSS 659
IY++ SY L +Y AF +LS +F+PK+I E + D M A+ +
Sbjct: 1227 IYNFLSYHRLSS------SYSAFVSTLSSVFLPKSISEILSHPGWRQTMVDEMVALHFNG 1280
Query: 658 TWDLVTYLSCT*PIVYEWVYTIKNNPHGYIEKYNMSPKIKSNL*V---DYFETFS 503
TWDLV+ + WVYT+K P G + + K + DY +TFS
Sbjct: 1281 TWDLVSLPLGKSTVGCRWVYTVKVGPDGQVNRLKARLVAKGYTQIYGCDYGDTFS 1335
Score = 48.1 bits (113), Expect(2) = 1e-11
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Frame = -2
Query: 479 MDVKNTFLYGILIEEVY---------KVESSI*T*NKINR----LK*ILRAWFQKFSQVA 339
+D+KN FLY L+EEVY + ES + K+ R LK RAWF FS V
Sbjct: 1343 LDIKNAFLYAELLEEVYMEQPPGFVAQGESGLVC--KLRRSLYGLKQSPRAWFGHFSSVV 1400
Query: 338 TRSGL*CSKTDHLLFVHQSANGIIVRCHLCR*HSFI-ENDSKGILKVRKHLKRKFYIK 168
G+ S+ DH +F H +++ + + I +D +GI ++++HL F K
Sbjct: 1401 QEFGMLWSEADHSVFYHHNSSSQCIYLVVYVDDIVITSSDQEGIQRLKQHLFNHFQTK 1458