BLASTX nr result
ID: Cheilocostus21_contig00059977
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00059977
(649 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP35061.1| Retrovirus-related Pol polyprotein from transposo... 278 5e-92
ref|XP_020578757.1| uncharacterized protein LOC110023608 [Phalae... 283 2e-91
ref|XP_020240016.1| uncharacterized protein LOC109818890 [Cajanu... 278 5e-90
ref|XP_014632941.1| PREDICTED: uncharacterized mitochondrial pro... 275 1e-89
ref|XP_017186550.1| PREDICTED: uncharacterized mitochondrial pro... 275 2e-89
ref|XP_022565251.1| uncharacterized protein LOC111209564 [Brassi... 278 3e-89
ref|XP_020577796.1| uncharacterized protein LOC110022962 [Phalae... 273 5e-88
ref|XP_014624210.1| PREDICTED: uncharacterized mitochondrial pro... 271 3e-87
ref|XP_014629708.1| PREDICTED: uncharacterized mitochondrial pro... 271 4e-87
ref|XP_014617075.1| PREDICTED: uncharacterized mitochondrial pro... 265 6e-86
ref|XP_019261202.1| PREDICTED: uncharacterized protein LOC109239... 263 4e-85
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 283 1e-84
gb|OIS96996.1| retrovirus-related pol polyprotein from transposo... 264 3e-84
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 281 6e-84
gb|OIT08748.1| retrovirus-related pol polyprotein from transposo... 259 9e-84
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 280 1e-83
gb|OIT19970.1| retrovirus-related pol polyprotein from transposo... 262 2e-83
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 279 2e-83
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 279 2e-83
gb|OIT02422.1| retrovirus-related pol polyprotein from transposo... 258 4e-83
>gb|KYP35061.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
gb|KYP41722.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 240
Score = 278 bits (712), Expect = 5e-92
Identities = 135/215 (62%), Positives = 164/215 (76%)
Frame = -3
Query: 647 KVDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFG 468
KVDPT+Y+ L+G+LRYLT TRPDILY VG++S +ME+PT THLK A RILRYIKGT FG
Sbjct: 15 KVDPTLYKSLVGSLRYLTCTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYIKGTTSFG 74
Query: 467 LFYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEY 288
L+Y+ S+ +KL+GYSDS+W GD+DD K T G++F GDT FTW SKKQ IVTLSTCEAEY
Sbjct: 75 LYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEY 134
Query: 287 VVATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFI 108
V AT+ VC AIWLRNLLK + + Q E TK++VDN IAL KNP+F+DRSKHI TR+H+I
Sbjct: 135 VAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKHIHTRYHYI 194
Query: 107 RECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
RECI+ D +A I TKPLK E F +
Sbjct: 195 RECISNKDVQMEYVKTHDQVADIFTKPLKKEVFMK 229
>ref|XP_020578757.1| uncharacterized protein LOC110023608 [Phalaenopsis equestris]
Length = 406
Score = 283 bits (724), Expect = 2e-91
Identities = 134/215 (62%), Positives = 164/215 (76%)
Frame = -3
Query: 647 KVDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFG 468
++DP ++ L+G+LRYLT TRPDILY VGL+S +ME+PT+THLK A RI+RYIKGTIDFG
Sbjct: 107 RIDPIFFKSLVGSLRYLTCTRPDILYAVGLVSRYMETPTVTHLKTAKRIMRYIKGTIDFG 166
Query: 467 LFYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEY 288
LFY+ S+ FKL+GYSDS+W GD+DD K T G++F GDT FTW SKKQ IVTLSTCEAEY
Sbjct: 167 LFYSSSNNFKLVGYSDSDWAGDMDDIKSTTGFVFFIGDTAFTWMSKKQPIVTLSTCEAEY 226
Query: 287 VVATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFI 108
V AT+ VC AIWLRNLLK + + Q+E K+ +DN IAL KNP+F+DRSKHID R+H+I
Sbjct: 227 VAATSCVCHAIWLRNLLKEISLPQEEAIKICIDNKSAIALAKNPVFHDRSKHIDMRYHYI 286
Query: 107 RECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
RECI D +A I TKPLK EDF +
Sbjct: 287 RECIERREIQVQYVKSQDQVADIFTKPLKIEDFIK 321
>ref|XP_020240016.1| uncharacterized protein LOC109818890 [Cajanus cajan]
Length = 386
Score = 278 bits (712), Expect = 5e-90
Identities = 135/215 (62%), Positives = 164/215 (76%)
Frame = -3
Query: 647 KVDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFG 468
KVDPT+Y+ L+G+LRYLT TRPDILY VG++S +ME+PT THLK A RILRYIKGT FG
Sbjct: 161 KVDPTLYKSLVGSLRYLTCTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYIKGTTSFG 220
Query: 467 LFYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEY 288
L+Y+ S+ +KL+GYSDS+W GD+DD K T G++F GDT FTW SKKQ IVTLSTCEAEY
Sbjct: 221 LYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEY 280
Query: 287 VVATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFI 108
V AT+ VC AIWLRNLLK + + Q E TK++VDN IAL KNP+F+DRSKHI TR+H+I
Sbjct: 281 VAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKHIHTRYHYI 340
Query: 107 RECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
RECI+ D +A I TKPLK E F +
Sbjct: 341 RECISNKDVQMEYVKTHDQVADIFTKPLKKEVFMK 375
>ref|XP_014632941.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Glycine max]
Length = 300
Score = 275 bits (702), Expect = 1e-89
Identities = 135/215 (62%), Positives = 161/215 (74%)
Frame = -3
Query: 647 KVDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFG 468
KVDPT+++ L+G+LRYLTNTRPDILY VG++ FME+PT THLKAA ILRY KGTIDFG
Sbjct: 69 KVDPTVFKSLVGSLRYLTNTRPDILYAVGVVCRFMEAPTSTHLKAAKIILRYWKGTIDFG 128
Query: 467 LFYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEY 288
LFY PS+ FKL+G+ DS++ GD+DD K T ++F GD FTWSSKKQAIV LSTCEAEY
Sbjct: 129 LFYFPSNNFKLVGFCDSDFAGDVDDRKSTTRFMFFMGDYVFTWSSKKQAIVKLSTCEAEY 188
Query: 287 VVATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFI 108
V AT+ C AIWLR LK +H+ Q E TK++VDN L KNP+F++RSKHIDTR+HFI
Sbjct: 189 VAATSCTCHAIWLRRSLKELHLVQKESTKIYVDNRSGQELAKNPVFHERSKHIDTRYHFI 248
Query: 107 RECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
RECI D +A I TKPLKFEDF R
Sbjct: 249 RECIAKKEVELIHVKTQDQVADIFTKPLKFEDFQR 283
>ref|XP_017186550.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Malus domestica]
Length = 334
Score = 275 bits (704), Expect = 2e-89
Identities = 136/214 (63%), Positives = 162/214 (75%)
Frame = -3
Query: 644 VDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFGL 465
VDPT ++ L+G+LRYLT TRPDILY VGL+S +ME+P THLK A RILRY+KGTI+FGL
Sbjct: 58 VDPTFFKSLVGSLRYLTCTRPDILYVVGLVSRYMENPITTHLKTAKRILRYLKGTINFGL 117
Query: 464 FYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEYV 285
FY+ SS +KL+GYSDS+W GD DD K T G++F GDT FTW SKKQ IVTLSTCEAEYV
Sbjct: 118 FYSSSSNYKLVGYSDSDWAGDSDDRKSTTGFVFFNGDTAFTWMSKKQPIVTLSTCEAEYV 177
Query: 284 VATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFIR 105
ATA VC IWLRNLL +++ Q+E T+++VDN IAL KNP+F+DRSKHIDTR+H+IR
Sbjct: 178 AATACVCHVIWLRNLLTELNMPQEEPTEIYVDNKSAIALAKNPVFHDRSKHIDTRYHYIR 237
Query: 104 ECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
ECI D IA I TKPLK E F R
Sbjct: 238 ECIARKDVQVEYVKSQDQIADIFTKPLKQEVFIR 271
>ref|XP_022565251.1| uncharacterized protein LOC111209564 [Brassica napus]
Length = 431
Score = 278 bits (711), Expect = 3e-89
Identities = 132/214 (61%), Positives = 166/214 (77%)
Frame = -3
Query: 644 VDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFGL 465
VDPT+++ L+G+LRYLT TRPDIL+ VG++S +ME PT TH KAA RILRYIKGTI+FGL
Sbjct: 200 VDPTLFKSLVGSLRYLTCTRPDILHAVGVVSRYMEHPTTTHFKAAKRILRYIKGTINFGL 259
Query: 464 FYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEYV 285
+Y+ S +KL+GYSDS+W GD+DD K T G++F G+ FTW SKKQ IVTLSTCEAEYV
Sbjct: 260 YYSISDDYKLVGYSDSDWGGDVDDRKSTSGFVFFIGEIAFTWMSKKQPIVTLSTCEAEYV 319
Query: 284 VATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFIR 105
AT+ VC AIWLRNLLK ++++Q+E TK+FV+N IAL KNP+F+DRSKHIDTR+H+IR
Sbjct: 320 AATSCVCHAIWLRNLLKELNLTQEEPTKIFVNNRSAIALAKNPVFHDRSKHIDTRYHYIR 379
Query: 104 ECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
EC+ D +A I TKPLK EDF +
Sbjct: 380 ECVTKMDVQLEYVKTNDQVADIFTKPLKREDFIK 413
>ref|XP_020577796.1| uncharacterized protein LOC110022962 [Phalaenopsis equestris]
Length = 388
Score = 273 bits (699), Expect = 5e-88
Identities = 132/215 (61%), Positives = 162/215 (75%)
Frame = -3
Query: 647 KVDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFG 468
++DP ++ L+G+LRYLT TRPDILY VGL+S +ME+PT+THLK A RI+RYIKGTIDFG
Sbjct: 156 RIDPIFFKSLVGSLRYLTCTRPDILYVVGLVSRYMETPTVTHLKTAKRIMRYIKGTIDFG 215
Query: 467 LFYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEY 288
LFY+ S+ FKL+GYSDS+W GD+DD K T G++F GDT FTW SKKQ IVTLSTCEAEY
Sbjct: 216 LFYSSSNNFKLVGYSDSDWAGDMDDRKSTTGFVFFIGDTAFTWMSKKQPIVTLSTCEAEY 275
Query: 287 VVATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFI 108
V AT+ VC AIWLRNLLK + + Q+E K+ +DN IAL KNP+F+DRSKHID +H+I
Sbjct: 276 VAATSCVCHAIWLRNLLKEISLPQEEAIKICIDNKSAIALAKNPVFHDRSKHIDMCYHYI 335
Query: 107 RECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
RE I D +A I TKPLK EDF +
Sbjct: 336 RERIERREVQVQYVKSQDQVADIFTKPLKSEDFIK 370
>ref|XP_014624210.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Glycine max]
Length = 380
Score = 271 bits (693), Expect = 3e-87
Identities = 131/215 (60%), Positives = 161/215 (74%)
Frame = -3
Query: 647 KVDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFG 468
KVD T+++ L+G+LRYLTNTRPDILY VG++ F E+PT HLK A RILRY+KGTIDFG
Sbjct: 149 KVDSTVFKSLMGSLRYLTNTRPDILYAVGVVCRFTETPTSPHLKVAKRILRYLKGTIDFG 208
Query: 467 LFYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEY 288
LFY+PS+ +KL+G+ DS++ GD+DD K TI ++ GD FTWSSKKQ IVTLSTCEAEY
Sbjct: 209 LFYSPSNNYKLVGFCDSDFAGDVDDRKSTIEFVIFMGDCVFTWSSKKQGIVTLSTCEAEY 268
Query: 287 VVATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFI 108
VVAT+ C AIWLR LL+ + + Q E TK++VDN L KNP+F++RSKHIDTR+HFI
Sbjct: 269 VVATSCTCHAIWLRRLLEELQLLQKESTKIYVDNRSAQELAKNPVFHERSKHIDTRYHFI 328
Query: 107 RECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
RECI D +A I TKPLKFEDF R
Sbjct: 329 RECITKKEVELTHVKTQDQVADIFTKPLKFEDFRR 363
>ref|XP_014629708.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Glycine max]
Length = 387
Score = 271 bits (693), Expect = 4e-87
Identities = 130/215 (60%), Positives = 161/215 (74%)
Frame = -3
Query: 647 KVDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFG 468
KVD T+++ L+G+ RYLTNTRPDILY VG++ F E+PT +LKAA RILRY+KGTIDFG
Sbjct: 156 KVDSTVFKSLVGSFRYLTNTRPDILYAVGVVCRFTEAPTSPYLKAAKRILRYLKGTIDFG 215
Query: 467 LFYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEY 288
LFY+PS+ +KL+G+ DS++ GD+DD K T G++F GD FTWSSKKQ IVTLSTCEAEY
Sbjct: 216 LFYSPSNNYKLVGFCDSDFAGDVDDRKSTTGFVFFMGDCVFTWSSKKQGIVTLSTCEAEY 275
Query: 287 VVATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFI 108
VVAT+ C AIWLR LL+ + + Q E TK++VDN L KNP+F++R KHIDTR+HFI
Sbjct: 276 VVATSCTCHAIWLRRLLEELQLLQKESTKIYVDNRSAQELAKNPVFHERCKHIDTRYHFI 335
Query: 107 RECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
RECI D +A I TKPLKFEDF R
Sbjct: 336 RECITKKEVELTHVETQDQVADIFTKPLKFEDFRR 370
>ref|XP_014617075.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Glycine max]
Length = 302
Score = 265 bits (678), Expect = 6e-86
Identities = 125/214 (58%), Positives = 159/214 (74%)
Frame = -3
Query: 644 VDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFGL 465
VDPT+Y+ L+G+LRYLT TRPDILY +G++S +ME+PT+TH KAA RILRYIKGT +FGL
Sbjct: 78 VDPTLYKSLVGSLRYLTYTRPDILYALGVVSRYMEAPTITHFKAAKRILRYIKGTTNFGL 137
Query: 464 FYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEYV 285
Y S + ++GYSDS+W GD+DD K T G++F GDT FTW SKKQ IVTLSTCEA YV
Sbjct: 138 HYYSSDNYNIVGYSDSDWSGDLDDRKSTTGFVFFMGDTAFTWMSKKQPIVTLSTCEAVYV 197
Query: 284 VATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFIR 105
AT+ VC AIW+ NLLK + + Q++ ++ VD+ L +AL KNP+F++RSKHIDTR+HFIR
Sbjct: 198 AATSCVCHAIWIMNLLKELKMPQEKPMEICVDDKLALALAKNPVFHERSKHIDTRYHFIR 257
Query: 104 ECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
ECI D +A I TKPLK E F +
Sbjct: 258 ECIEKKEVKLKYVMSQDQVADIFTKPLKLETFVK 291
>ref|XP_019261202.1| PREDICTED: uncharacterized protein LOC109239138 [Nicotiana
attenuata]
Length = 295
Score = 263 bits (672), Expect = 4e-85
Identities = 127/215 (59%), Positives = 160/215 (74%)
Frame = -3
Query: 647 KVDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFG 468
KVDPT ++ L+G+LRYLT TRPDIL+ VG++S FME+PT THLK RILRY+KGTIDFG
Sbjct: 69 KVDPTFFKSLVGSLRYLTCTRPDILFAVGVVSRFMEAPTSTHLKVTRRILRYLKGTIDFG 128
Query: 467 LFYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEY 288
LFY+ S+ F L+G+ DS++ GDIDD K T G++F GD+ +WSSKKQ+IVTL TCEAEY
Sbjct: 129 LFYSSSNDFNLMGFCDSDYAGDIDDRKSTTGFVFFLGDSVISWSSKKQSIVTLLTCEAEY 188
Query: 287 VVATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFI 108
+ AT+ C AIWLR LLK +++ Q E T++ +DN AL KNP+++DRSKHIDTR+HFI
Sbjct: 189 IAATSCTCHAIWLRRLLKELNLPQIEATEICIDNKSAQALAKNPVYHDRSKHIDTRYHFI 248
Query: 107 RECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
RE I D +A I TKPLKFEDF R
Sbjct: 249 RESIAKKEVELKYVKSHDQVADIFTKPLKFEDFQR 283
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 283 bits (723), Expect = 1e-84
Identities = 135/214 (63%), Positives = 165/214 (77%)
Frame = -3
Query: 644 VDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFGL 465
VDPT ++ L+G+LRYLT TRPDILY VG++S +ME PT TH KAA RILRYIKGT++FGL
Sbjct: 1089 VDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGL 1148
Query: 464 FYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEYV 285
Y+ +S +KL+GYSDS+W GD+DD K T G++F GDT FTW SKKQ IVTLSTCEAEYV
Sbjct: 1149 HYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYV 1208
Query: 284 VATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFIR 105
AT+ VC AIWLRNLLK + + Q+E TK+FVDN IAL KNP+F+DRSKHIDTR+H+IR
Sbjct: 1209 AATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIR 1268
Query: 104 ECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
EC++ D +A I TKPLK EDF +
Sbjct: 1269 ECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIK 1302
>gb|OIS96996.1| retrovirus-related pol polyprotein from transposon tnt 1-94
[Nicotiana attenuata]
Length = 402
Score = 264 bits (675), Expect = 3e-84
Identities = 127/214 (59%), Positives = 159/214 (74%)
Frame = -3
Query: 644 VDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFGL 465
V+PT ++ L+G+LRYLT TRPDILYGVGL+S FME+PT +HLK A RILRYIK T+D+G+
Sbjct: 178 VNPTFFKSLVGSLRYLTCTRPDILYGVGLVSRFMEAPTTSHLKVAKRILRYIKDTLDYGI 237
Query: 464 FYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEYV 285
Y+ S K +GY DS+W GDIDD K T G++F G++ FTW+SKKQ IVTLSTCEAEYV
Sbjct: 238 LYSSSKDSKFVGYCDSDWAGDIDDRKSTTGFVFFLGNSAFTWNSKKQPIVTLSTCEAEYV 297
Query: 284 VATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFIR 105
A + VC AIWLR+LL+ +H Q + TK+FVDN I L KNP+F++RSKHIDTR+HFIR
Sbjct: 298 AACSCVCHAIWLRSLLEELHQPQKDATKIFVDNKSAIELAKNPVFHERSKHIDTRYHFIR 357
Query: 104 ECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
+CI+ D IA I TKPLK E F +
Sbjct: 358 DCISNKVVELEHVKSQDQIADIFTKPLKIEVFQK 391
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 281 bits (718), Expect = 6e-84
Identities = 134/214 (62%), Positives = 164/214 (76%)
Frame = -3
Query: 644 VDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFGL 465
VDPT ++ L+G+LRYLT TRPDILY VG++S +ME PT TH KAA RILRYIKGT++FGL
Sbjct: 1121 VDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGL 1180
Query: 464 FYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEYV 285
Y+ +S +KL+GYSDS+W GD+DD K T G++F GDT FTW SKKQ IV LSTCEAEYV
Sbjct: 1181 HYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYV 1240
Query: 284 VATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFIR 105
AT+ VC AIWLRNLLK + + Q+E TK+FVDN IAL KNP+F+DRSKHIDTR+H+IR
Sbjct: 1241 AATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIR 1300
Query: 104 ECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
EC++ D +A I TKPLK EDF +
Sbjct: 1301 ECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIK 1334
>gb|OIT08748.1| retrovirus-related pol polyprotein from transposon tnt 1-94
[Nicotiana attenuata]
Length = 296
Score = 259 bits (663), Expect = 9e-84
Identities = 125/215 (58%), Positives = 159/215 (73%)
Frame = -3
Query: 647 KVDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFG 468
KVDPT ++ L+G+LRYLT TRP+IL+ VG++S FME+PT THLK RILRY+KGTIDFG
Sbjct: 69 KVDPTFFKSLVGSLRYLTCTRPNILFAVGVVSRFMEAPTSTHLKVTRRILRYLKGTIDFG 128
Query: 467 LFYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEY 288
LFY+ S+ F L+G+ DS++ GDIDD K T G++F GD+ WSSK Q+IVTLSTCEAEY
Sbjct: 129 LFYSSSNDFNLMGFCDSDYAGDIDDRKSTTGFVFFLGDSVIPWSSKTQSIVTLSTCEAEY 188
Query: 287 VVATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFI 108
+ AT+ C AIWLR LLK +++ Q E T++ +DN AL KNP+++D+SKHIDTR+HFI
Sbjct: 189 IAATSCTCHAIWLRRLLKELNLPQIEATEICIDNKSAQALAKNPVYHDQSKHIDTRYHFI 248
Query: 107 RECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
ECI D +A I TKPLKFEDF R
Sbjct: 249 IECIAKKEIELKYVKSHDQVADIFTKPLKFEDFQR 283
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 280 bits (715), Expect = 1e-83
Identities = 134/214 (62%), Positives = 164/214 (76%)
Frame = -3
Query: 644 VDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFGL 465
VDPT ++ L+G+LRYLT TRPDILY VG++S +ME PT TH KAA RILRYIKGT++FGL
Sbjct: 1060 VDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGL 1119
Query: 464 FYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEYV 285
Y+ +S +KL+GYSDS+W D+DD K T G++F GDT FTW SKKQ IVTLSTCEAEYV
Sbjct: 1120 HYSTTSDYKLVGYSDSDWGRDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYV 1179
Query: 284 VATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFIR 105
AT+ VC AIWLRNLLK + + Q+E TK+FVDN IAL KNP+F+DRSKHIDTR+H+IR
Sbjct: 1180 AATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIR 1239
Query: 104 ECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
EC++ D +A I TKPLK EDF +
Sbjct: 1240 ECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIK 1273
>gb|OIT19970.1| retrovirus-related pol polyprotein from transposon tnt 1-94,
partial [Nicotiana attenuata]
Length = 401
Score = 262 bits (670), Expect = 2e-83
Identities = 127/215 (59%), Positives = 160/215 (74%)
Frame = -3
Query: 647 KVDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFG 468
KVDPT ++ L+G+LRYLT TRPDIL+ VG++S F+E+PT HLK RILRY+KGTIDFG
Sbjct: 177 KVDPTFFKSLVGSLRYLTCTRPDILFAVGVVSRFVEAPTSNHLKVTRRILRYLKGTIDFG 236
Query: 467 LFYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEY 288
LFY+ S+ F LIG+ DS++ GDIDD K T G++F GD+ +WSSKKQ+IVTLSTCEAEY
Sbjct: 237 LFYSSSNDFNLIGFCDSDYAGDIDDRKSTTGFVFFLGDSVISWSSKKQSIVTLSTCEAEY 296
Query: 287 VVATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFI 108
+ AT+ C AIWLR LLK +++ Q E T++ +DN AL KNP+++DRSKHIDTR+HFI
Sbjct: 297 IAATSCTCHAIWLRRLLKELNLPQIEATEICIDNKSAQALTKNPVYHDRSKHIDTRYHFI 356
Query: 107 RECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
RE I D +A I TKPLKFEDF R
Sbjct: 357 RESIAKKEVELKYVKSRDQVADIFTKPLKFEDFQR 391
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 279 bits (714), Expect = 2e-83
Identities = 133/214 (62%), Positives = 164/214 (76%)
Frame = -3
Query: 644 VDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFGL 465
VDPT ++ L+G+LRYLT TRPDILY VG++S +ME PT TH KAA RILRYIKGT++FGL
Sbjct: 1121 VDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGL 1180
Query: 464 FYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEYV 285
Y+ +S +KL+GYSDS+W GD+DD K T G++F GDT FTW SKKQ IVTLSTCEAEYV
Sbjct: 1181 HYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYV 1240
Query: 284 VATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFIR 105
AT+ VC AIWLRNLLK + + Q+E TK+FVDN IAL KNP+F+DRSKHIDTR+H+IR
Sbjct: 1241 AATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIR 1300
Query: 104 ECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
EC++ D +A TKPLK E+F +
Sbjct: 1301 ECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIK 1334
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 279 bits (714), Expect = 2e-83
Identities = 133/214 (62%), Positives = 164/214 (76%)
Frame = -3
Query: 644 VDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFGL 465
VDPT ++ L+G+LRYLT TRPDILY VG++S +ME PT TH KAA RILRYIKGT++FGL
Sbjct: 1121 VDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGL 1180
Query: 464 FYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEYV 285
Y+ +S +KL+GYSDS+W GD+DD K T G++F GDT FTW SKKQ IVTLSTCEAEYV
Sbjct: 1181 HYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYV 1240
Query: 284 VATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFIR 105
AT+ VC AIWLRNLLK + + Q+E TK+FVDN IAL KNP+F+DRSKHIDTR+H+IR
Sbjct: 1241 AATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIR 1300
Query: 104 ECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
EC++ D +A TKPLK E+F +
Sbjct: 1301 ECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIK 1334
>gb|OIT02422.1| retrovirus-related pol polyprotein from transposon tnt 1-94
[Nicotiana attenuata]
Length = 296
Score = 258 bits (659), Expect = 4e-83
Identities = 125/215 (58%), Positives = 159/215 (73%)
Frame = -3
Query: 647 KVDPTMYQRLIGNLRYLTNTRPDILYGVGLLSCFMESPTLTHLKAA*RILRYIKGTIDFG 468
KV+PT ++ L+G+LRYLT TRPDIL+ VG++S FME+PT TH K RILRY+KGTIDFG
Sbjct: 69 KVNPTFFKSLVGSLRYLTCTRPDILFAVGVVSRFMEAPTSTHQKVTRRILRYLKGTIDFG 128
Query: 467 LFYAPSSKFKLIGYSDSNWEGDIDD*KGTIGYLFSFGDTTFTWSSKKQAIVTLSTCEAEY 288
LFY+ SS F L+G+ DS++ GDIDD K T G++F GD+ +WSSKKQ+IVTLSTCEAEY
Sbjct: 129 LFYSSSSDFSLMGFCDSDYAGDIDDRKSTTGFVFFLGDSVISWSSKKQSIVTLSTCEAEY 188
Query: 287 VVATAYVCDAIWLRNLLKMMHISQDEVTKVFVDNTLVIALGKNPIFYDRSKHIDTRFHFI 108
+ AT+ C AIWLR LLK +++ Q E T++ +DN AL KNP+++DRSKHID+R+HFI
Sbjct: 189 ITATSCTCHAIWLRGLLKELNLPQIEATEICIDNKSAQALAKNPVYHDRSKHIDSRYHFI 248
Query: 107 RECINXXXXXXXXXXX*D*IAAILTKPLKFEDFAR 3
RECI D A I TK LKF+DF R
Sbjct: 249 RECIAKKEVELKYMKSHDQAADIFTKLLKFDDFQR 283