BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00059641
         (1407 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus] >gi|...   272   9e-77
gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]                256   6e-72
gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]                     245   4e-68
gb|AIK01824.1| ORF3 [Piper yellow mottle virus]                       233   6e-66
gb|AIK01820.1| ORF3 [Piper yellow mottle virus]                       232   2e-65
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] >gi|5403574...   230   5e-65
gb|AIK01816.1| ORF3 [Piper yellow mottle virus]                       228   2e-64
gb|ANV20902.1| ORF3 protein [Dioscorea bacilliform RT virus]          227   2e-62
gb|ANV20896.1| ORF3 protein [Dioscorea bacilliform RT virus]          227   2e-62
gb|ASA40116.1| ORF3 [Dioscorea bacilliform RT virus 2]                227   3e-62
gb|APB42235.1| ORF3 [Dioscorea bacilliform virus]                     222   7e-62
emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]               218   3e-61
ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] >gi|347...   216   1e-60
gb|ANV20899.1| ORF3 protein [Dioscorea bacilliform RT virus]          220   3e-60
gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus]          215   1e-59
gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus]          215   1e-59
gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus]          214   2e-59
gb|ASA40120.1| ORF3 [Dioscorea bacilliform virus]                     221   2e-59
gb|ATZ69482.1| ORF3 polyprotein [Cacao swollen shoot Ghana M virus]   211   1e-58
gb|ATW01249.1| ORF3 protein [Dioscorea bacilliform RT virus]          207   7e-58

>ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus]
 gb|AKA45804.1| polyprotein [Taro bacilliform CH virus]
          Length = 1803

 Score =  272 bits (695), Expect(2) = 9e-77
 Identities = 138/325 (42%), Positives = 197/325 (60%), Gaps = 5/325 (1%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITED 429
            +C+C+LCG+EGHFARECPN+R+++KRV +FE LD+PEDC+IVSV+EG++ SDAIY+I+E 
Sbjct: 823  RCKCYLCGQEGHFARECPNDRRSIKRVAIFENLDLPEDCDIVSVQEGDNESDAIYNISEG 882

Query: 430  E--GDLNAN---TLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEV 594
            E   DL  +     + E+++  REED+T+WIG  EGYR+M+K ++ QHDC H+WE N   
Sbjct: 883  EEMEDLTKSLNVMSVSEHLYYFREEDQTYWIG-GEGYRSMIKATKTQHDCNHVWEYNG-- 939

Query: 595  PIEQINCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIRFNPHELIHS 774
                  C CCK E+   +RM+C  C  T C +C++YY+ ++VP ++ N I++NP  L+H 
Sbjct: 940  -AGSFKCFCCKEETSVNYRMHCPQCLITTCNLCALYYFGQKVPASRPNPIQYNPLSLMHE 998

Query: 775  QQDYIMFCEAEIKRLKSELEVL*VFKEENQELNKKMAQTVLAAQKSEEAANWKQKYYKLE 954
            QQ YI +CEAEI RLK E+E                          ++   WKQKY   +
Sbjct: 999  QQGYITWCEAEITRLKQEVET-----------------------SKKQVEYWKQKYLSTQ 1035

Query: 955  EEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIFSVEANEEPIMKKGKSILYN 1134
            EEV +                    QE   V  +   QRI S+E NE    KK K++LYN
Sbjct: 1036 EEVFE----KEFDELYKEKGKGVVIQEATNVFRQIETQRILSIEKNELSPPKKTKNMLYN 1091

Query: 1135 LKVDLEISNIPIFIVNAILDTGATT 1209
            L +++ I ++  F V+AILDTGA+T
Sbjct: 1092 LILEINIPDVANFSVHAILDTGAST 1116



 Score = 45.8 bits (107), Expect(2) = 9e-77
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVRNK 250
           R+S+TYKGKPH SH RIE +K+L RNK
Sbjct: 796 RRSRTYKGKPHASHARIERRKHLQRNK 822


>gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]
          Length = 1803

 Score =  256 bits (653), Expect(2) = 6e-72
 Identities = 134/325 (41%), Positives = 195/325 (60%), Gaps = 5/325 (1%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITED 429
            +C+C+LCG+EGHFARECPN+R+++KRV +FE LD+PEDC+IVSV+EG++ SDAIYSI+E 
Sbjct: 823  RCKCYLCGQEGHFARECPNDRRSIKRVVIFENLDLPEDCDIVSVQEGDNESDAIYSISEG 882

Query: 430  E--GDLNAN---TLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEV 594
            E   DL  +     + E+++  REED+T+ IG  EGYR+M+K ++ QHDC H+WE N   
Sbjct: 883  EEMEDLTKSLNVMSVSEHLYYFREEDQTYCIG-GEGYRSMIKATKTQHDCNHVWEYNG-- 939

Query: 595  PIEQINCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIRFNPHELIHS 774
                + C   K E+    RM+C  C  T C +C++YY+ ++VP ++ + I++NP  L+H 
Sbjct: 940  -AGSLKCFYYKEETSVNCRMHCPQCLITTCNLCALYYFGQKVPASRPSPIQYNPLSLMHE 998

Query: 775  QQDYIMFCEAEIKRLKSELEVL*VFKEENQELNKKMAQTVLAAQKSEEAANWKQKYYKLE 954
            QQ YI +CEAEI RLK E+E                          ++   WKQKY   +
Sbjct: 999  QQGYITWCEAEITRLKQEVET-----------------------SKKQTEYWKQKYLSTQ 1035

Query: 955  EEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIFSVEANEEPIMKKGKSILYN 1134
            EEV +                    QE   V+ +   Q+I S+E NE    KK K++LYN
Sbjct: 1036 EEVFE----KEFDELYKEKGKGVVIQEATNVVRQIETQKILSIEKNELSPPKKTKNMLYN 1091

Query: 1135 LKVDLEISNIPIFIVNAILDTGATT 1209
            L +++ I ++  F V+AILDTGA+T
Sbjct: 1092 LILEINIPDVANFSVHAILDTGAST 1116



 Score = 45.8 bits (107), Expect(2) = 6e-72
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVRNK 250
           R+S+TYKGKPH SH RIE +K+L RNK
Sbjct: 796 RRSRTYKGKPHASHARIERRKHLQRNK 822


>gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]
          Length = 1946

 Score =  245 bits (626), Expect(2) = 4e-68
 Identities = 140/334 (41%), Positives = 200/334 (59%), Gaps = 14/334 (4%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITED 429
            KC+CFLCGEEGHFARECPNER+NVKRV MFE ++IPED EI+SV+EG+  SDAIYS++E 
Sbjct: 962  KCKCFLCGEEGHFARECPNERRNVKRVAMFEGVNIPEDYEIMSVQEGDPMSDAIYSLSEG 1021

Query: 430  EGDLNANTLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEVPIEQI 609
            E D     ++ E I  LR+ED T+WIG  + +R  V+V++  HDC H WE++ E+  +  
Sbjct: 1022 E-DGQLGAVIEEVICYLRQEDNTYWIGKDDNWRAQVRVTKEVHDCNHTWEMHPEMIGQTP 1080

Query: 610  NCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIRFNPHELIHSQQDYI 789
             C  CK E+Q+  R +CS C TT CGMC   Y++ ++PV +   +R++P  L+  QQ YI
Sbjct: 1081 RCLTCKRETQQSWRAHCSKCQTTSCGMCGPNYFNIKIPVRRVEPVRYDPKPLLEQQQVYI 1140

Query: 790  MFCEAEIKRLKSELEVL---*VFKEENQELNKKM---AQTVLAAQKSE--------EAAN 927
             + +AEI+RLK EL+ +      + +N + N +    AQ+ +  Q+ E        E   
Sbjct: 1141 KWADAEIERLKGELKAVQEKAALEAQNMQENVQREIEAQSKIHMQEIEAIKLEVDTENEE 1200

Query: 928  WKQKYYKLEEEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIFSVEANEEPIM 1107
             + +  +L+ EV D                      +A+ L E+  ++IFS EA  +P  
Sbjct: 1201 LRFENDRLKLEVHDLKKLLDAIKGKEPLEDEDGEGTSAF-LREEEHEKIFSAEAAVQP-- 1257

Query: 1108 KKGKSILYNLKVDLEISNIPIFIVNAILDTGATT 1209
            ++  + LYNL V+  I NIP F V AILDTGATT
Sbjct: 1258 RRNGNKLYNLNVEFNIPNIPPFRVRAILDTGATT 1291



 Score = 43.5 bits (101), Expect(2) = 4e-68
 Identities = 19/32 (59%), Positives = 22/32 (68%)
 Frame = +2

Query: 170  RKSKTYKGKPHPSHTRIETKKYLVRNKNVDVF 265
            RKS TYKGKPH +H RIE KK+L R +    F
Sbjct: 935  RKSTTYKGKPHQTHVRIEKKKHLQRERKCKCF 966


>gb|AIK01824.1| ORF3 [Piper yellow mottle virus]
          Length = 1925

 Score =  233 bits (595), Expect(2) = 6e-66
 Identities = 125/327 (38%), Positives = 190/327 (58%), Gaps = 8/327 (2%)
 Frame = +1

Query: 253  CRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITEDE 432
            C+C+LCGEEGHFA++C   +++++RV +FE L++PED ++VSV EGE+ SDAIYS++E E
Sbjct: 893  CKCYLCGEEGHFAKDCNRNKRDIRRVAIFEGLELPEDHDVVSVSEGEEDSDAIYSVSEGE 952

Query: 433  GDLNANTLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEVPIE-QI 609
             D +  TL H YI V  EED+T+W+G    ++ M+KVSQ+ HDC+H W  N +VP +  I
Sbjct: 953  -DGSVATLTH-YINVFFEEDRTYWVGKAGSWQPMIKVSQKVHDCQHCWMENTDVPNDGPI 1010

Query: 610  NCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIRFNPHELIHSQQDYI 789
             C CCK  SQK  R++C +C  T CG+CS + +DK + V +E    +NP  L+  QQ YI
Sbjct: 1011 QCLCCKRNSQKNFRIHCPICKVTSCGLCSKFCFDKSIQVKKEYVAPYNPRNLLEEQQKYI 1070

Query: 790  MFCEAEIKRLKSELEVL*VFKEENQEL---NKKMAQTVLAAQKSEE----AANWKQKYYK 948
             +CE E+KRL+  +      + EN  L   N+ + + +   Q++++      +  +++Y 
Sbjct: 1071 EWCELEMKRLRESINQDNELRMENDRLRLENQDLKRQIAKLQENQKMKALLEDLGEEFYM 1130

Query: 949  LEEEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIFSVEANEEPIMKKGKSIL 1128
             EE  +                      +   ++ E+ V     +    E I    KS+L
Sbjct: 1131 EEEANVLVEEWDNEKVTKELDNLEAELNKVGVIIPEEKV----CISKEGEKIKPISKSML 1186

Query: 1129 YNLKVDLEISNIPIFIVNAILDTGATT 1209
               +V LEI ++P F VNAILDTGATT
Sbjct: 1187 IKFQVKLEIPDVPEFTVNAILDTGATT 1213



 Score = 48.1 bits (113), Expect(2) = 6e-66
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVRNKN 253
           R+S TYKGKPH SH RIE +K+L+RNKN
Sbjct: 865 RRSTTYKGKPHSSHVRIEERKHLLRNKN 892


>gb|AIK01820.1| ORF3 [Piper yellow mottle virus]
          Length = 1925

 Score =  232 bits (591), Expect(2) = 2e-65
 Identities = 125/327 (38%), Positives = 189/327 (57%), Gaps = 8/327 (2%)
 Frame = +1

Query: 253  CRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITEDE 432
            C+C+LCGEEGHFA++C   +++++RV +FE L++PED ++VSV EGE+ SDAIYS++E E
Sbjct: 893  CKCYLCGEEGHFAKDCNRNKRDIRRVAIFEGLELPEDHDVVSVSEGEEDSDAIYSVSEGE 952

Query: 433  GDLNANTLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEVPIE-QI 609
             D +  T+ H YI V  EED+T+W+G    ++ M+KV+Q+ HDC+H W  N +VP +  I
Sbjct: 953  -DGSIATVTH-YINVFFEEDRTYWVGKAGSWQPMIKVTQKVHDCQHCWMENTDVPNDGPI 1010

Query: 610  NCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIRFNPHELIHSQQDYI 789
             C CCK  SQK  R++C +C  T CG+CS + +DK + V +E    +NP  L+  QQ YI
Sbjct: 1011 QCLCCKRNSQKNFRIHCPICKVTSCGLCSNFCFDKSIQVKKEYVAPYNPRNLLEEQQRYI 1070

Query: 790  MFCEAEIKRLKSELEVL*VFKEENQEL---NKKMAQTVLAAQKSEE----AANWKQKYYK 948
             +CE E+KRLK  +      + EN  L   N+ + + +   Q+ ++      +  ++YY 
Sbjct: 1071 EWCELEMKRLKESISHDNELRMENDRLQLENQDLKRQIAKLQEKQKMKALMEDLGEEYYS 1130

Query: 949  LEEEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIFSVEANEEPIMKKGKSIL 1128
             EE  +                      +   ++ E+ V     +    E I    KS+L
Sbjct: 1131 EEEVNVLVEEWDNKRVTKELDDLEAELNKVGVIIPEEKV----CISKEGEKIKPISKSML 1186

Query: 1129 YNLKVDLEISNIPIFIVNAILDTGATT 1209
               +V LEI ++P F VNAILDTGATT
Sbjct: 1187 IKFQVKLEIPDVPEFTVNAILDTGATT 1213



 Score = 48.1 bits (113), Expect(2) = 2e-65
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVRNKN 253
           R+S TYKGKPH SH RIE +K+L+RNKN
Sbjct: 865 RRSTTYKGKPHSSHVRIEERKHLLRNKN 892


>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus]
 gb|AGV08293.1| ORF3 [Piper yellow mottle virus]
          Length = 1925

 Score =  230 bits (587), Expect(2) = 5e-65
 Identities = 126/326 (38%), Positives = 183/326 (56%), Gaps = 7/326 (2%)
 Frame = +1

Query: 253  CRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITEDE 432
            C+C+LCGEEGHFA++C   +++++RV +FE L++PED ++VSV EGED SDAIYS++E E
Sbjct: 892  CKCYLCGEEGHFAKDCNRNKRDIRRVAIFEGLELPEDHDVVSVSEGEDDSDAIYSVSEGE 951

Query: 433  GDLNANTLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEVPIE-QI 609
             D +  T+ H YI V  EED+T+W+G    ++ M+KV+Q+ HDC+H W  N +VP +  I
Sbjct: 952  -DGSIATMTH-YINVFFEEDRTYWVGKAGSWQPMIKVTQKVHDCQHCWMENTDVPNDGPI 1009

Query: 610  NCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIRFNPHELIHSQQDYI 789
             C CCK  SQK  R++C +C  T CG+CS + +DK + V +E    +NP  L+  QQ YI
Sbjct: 1010 QCLCCKRNSQKNFRIHCPICKVTSCGLCSTFCFDKSIQVKKEYVAPYNPRNLLEEQQRYI 1069

Query: 790  MFCEAEIKRLKSELEVL*VFKEENQELN------KKMAQTVLAAQKSEEAANWKQKYYKL 951
             +CE E+KRLK  +      + EN  L       K+  + +   QK +       + +  
Sbjct: 1070 EWCELEMKRLKESIIQNDELRMENDRLQLENRDLKRQIEKLQDKQKMKALMEDLGEEFDY 1129

Query: 952  EEEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIFSVEANEEPIMKKGKSILY 1131
            EEEV                           V++    +    +    E I    KS+L 
Sbjct: 1130 EEEVNVLVEDWDNKRVTKELDDLEAELNKVGVIIP---EEKICISKEGEKIKPISKSMLI 1186

Query: 1132 NLKVDLEISNIPIFIVNAILDTGATT 1209
              +V LEI ++P F VNAILDTGATT
Sbjct: 1187 KFQVKLEIPDVPEFTVNAILDTGATT 1212



 Score = 48.1 bits (113), Expect(2) = 5e-65
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVRNKN 253
           R+S TYKGKPH SH RIE +K+L+RNKN
Sbjct: 864 RRSTTYKGKPHSSHVRIEKRKHLLRNKN 891


>gb|AIK01816.1| ORF3 [Piper yellow mottle virus]
          Length = 1925

 Score =  228 bits (582), Expect(2) = 2e-64
 Identities = 125/325 (38%), Positives = 182/325 (56%), Gaps = 7/325 (2%)
 Frame = +1

Query: 253  CRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITEDE 432
            C+C+LCGEEGHFA++C   +++++RV +FE L++PED ++VSV EGED SDAIYS++E E
Sbjct: 892  CKCYLCGEEGHFAKDCNRNKRDIRRVAIFEGLELPEDHDVVSVSEGEDDSDAIYSVSEGE 951

Query: 433  GDLNANTLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEVPIE-QI 609
             D +  T+ H YI V  EED+T+W+G    ++ M+KV+Q+ HDC+H W  N +VP +  I
Sbjct: 952  -DGSIATMTH-YINVFFEEDRTYWVGKAGSWQPMIKVTQKVHDCQHCWMENTDVPNDGPI 1009

Query: 610  NCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIRFNPHELIHSQQDYI 789
             C CCK  SQK  R++C +C  T CG+CS + +DK + V +E    +NP  L+  QQ YI
Sbjct: 1010 QCLCCKRNSQKNFRIHCPICKVTSCGLCSTFCFDKSIQVKKEYVAPYNPRNLLEEQQRYI 1069

Query: 790  MFCEAEIKRLKSELEVL*VFKEENQELN------KKMAQTVLAAQKSEEAANWKQKYYKL 951
             +CE E+KRLK  +      + EN  L       K+  + +   QK +       + +  
Sbjct: 1070 EWCELEMKRLKESIIQNDELRMENDRLQLENRDLKRQIEKLQDKQKMKALMEDLGEEFDY 1129

Query: 952  EEEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIFSVEANEEPIMKKGKSILY 1131
            EEEV                           V++    +    +    E I    KS+L 
Sbjct: 1130 EEEVNVLVEDWDNKRVTKELDDLEAELNKVGVIIP---EEKICISKEGEKIKPISKSMLI 1186

Query: 1132 NLKVDLEISNIPIFIVNAILDTGAT 1206
              +V LEI ++P F VNAILDTGAT
Sbjct: 1187 KFQVKLEIPDVPEFTVNAILDTGAT 1211



 Score = 48.1 bits (113), Expect(2) = 2e-64
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVRNKN 253
           R+S TYKGKPH SH RIE +K+L+RNKN
Sbjct: 864 RRSTTYKGKPHSSHVRIEKRKHLLRNKN 891


>gb|ANV20902.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1893

 Score =  227 bits (579), Expect(2) = 2e-62
 Identities = 133/330 (40%), Positives = 185/330 (56%), Gaps = 11/330 (3%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITED 429
            KC+CFLCGEEGHFAREC ++R+N+KRV +FE +++PEDCEIVSVKEGE  SDAIYSI+E 
Sbjct: 881  KCKCFLCGEEGHFARECSSDRRNIKRVAIFEGIELPEDCEIVSVKEGEAQSDAIYSISEG 940

Query: 430  EGD---LNANTLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEVPI 600
            E D    N N++ H  +F LR ED T+W+G   G+R  VKV+ ++H+C H W    E   
Sbjct: 941  EDDNEVHNLNSITHSSLFYLRAEDNTYWLG-GGGWRFAVKVTPQEHNCAHSWSYYEE--- 996

Query: 601  EQINCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIR--FNPHELIHS 774
            +   C  CK E  KR   +CS C  T CGMCS +Y   ++P  QE  +R  + P +L++ 
Sbjct: 997  QSRTCRFCKREVMKRFNAHCSKCSITTCGMCSNHYLGFQIPCQQEE-VRPVYEPRQLMNE 1055

Query: 775  QQDYIMFCEAEIKRLKSELEVL*VFKEENQELNKKMAQTVLAAQKSEEAANWKQKYYKLE 954
            Q  YI  CE EI RLK E+    +   EN+ ++ K+ + V      +E    + +  +L+
Sbjct: 1056 QMTYIKHCEEEIARLKQEVAAAKIL-SENEIVSMKIREAVETDTLRKENETLRLENERLQ 1114

Query: 955  EEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQR----IFSVEANEEPIM--KKG 1116
             EV D                     +     L+KS++     +   E   E ++     
Sbjct: 1115 LEVADLNKIIKGKQPIIPEDEELEELKQQVQQLKKSLEEKRLGVIICEGKGEQVLATTSS 1174

Query: 1117 KSILYNLKVDLEISNIPIFIVNAILDTGAT 1206
            ++ LYNL V+L I  I  F VNAILDTGAT
Sbjct: 1175 RNGLYNLVVELSIPGILPFSVNAILDTGAT 1204



 Score = 42.4 bits (98), Expect(2) = 2e-62
 Identities = 18/25 (72%), Positives = 20/25 (80%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVR 244
           R+S TYKGKPH +H RIE KKYL R
Sbjct: 849 RRSTTYKGKPHETHVRIEKKKYLER 873


>gb|ANV20896.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1893

 Score =  227 bits (579), Expect(2) = 2e-62
 Identities = 133/330 (40%), Positives = 185/330 (56%), Gaps = 11/330 (3%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITED 429
            KC+CFLCGEEGHFAREC ++R+N+KRV +FE +++PEDCEIVSVKEGE  SDAIYSI+E 
Sbjct: 881  KCKCFLCGEEGHFARECSSDRRNIKRVAIFEGIELPEDCEIVSVKEGEAQSDAIYSISEG 940

Query: 430  EGD---LNANTLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEVPI 600
            E D    N N++ H  +F LR ED T+W+G   G+R  VKV+ ++H+C H W    E   
Sbjct: 941  EDDNEVHNLNSITHSSLFYLRAEDNTYWLG-GGGWRFAVKVTPQEHNCAHSWSYYEE--- 996

Query: 601  EQINCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIR--FNPHELIHS 774
            +   C  CK E  KR   +CS C  T CGMCS +Y   ++P  QE  +R  + P +L++ 
Sbjct: 997  QSRTCRFCKREVMKRFNAHCSKCSITTCGMCSNHYLGFQIPCQQEE-VRPVYEPRQLMNE 1055

Query: 775  QQDYIMFCEAEIKRLKSELEVL*VFKEENQELNKKMAQTVLAAQKSEEAANWKQKYYKLE 954
            Q  YI  CE EI RLK E+    +   EN+ ++ K+ + V      +E    + +  +L+
Sbjct: 1056 QMTYIKHCEEEIARLKQEVAAAKIL-SENEIVSMKIREAVETDTLRKENETLRLENERLQ 1114

Query: 955  EEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQR----IFSVEANEEPIM--KKG 1116
             EV D                     +     L+KS++     +   E   E ++     
Sbjct: 1115 LEVADLNKIIKGKQPIIPEDEELEELKQQVQQLKKSLEEKRLGVIICEGKGEQVLATTSS 1174

Query: 1117 KSILYNLKVDLEISNIPIFIVNAILDTGAT 1206
            ++ LYNL V+L I  I  F VNAILDTGAT
Sbjct: 1175 RNGLYNLVVELSIPGILPFSVNAILDTGAT 1204



 Score = 42.4 bits (98), Expect(2) = 2e-62
 Identities = 18/25 (72%), Positives = 20/25 (80%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVR 244
           R+S TYKGKPH +H RIE KKYL R
Sbjct: 849 RRSTTYKGKPHETHVRIEKKKYLER 873


>gb|ASA40116.1| ORF3 [Dioscorea bacilliform RT virus 2]
          Length = 1892

 Score =  227 bits (578), Expect(2) = 3e-62
 Identities = 134/330 (40%), Positives = 185/330 (56%), Gaps = 11/330 (3%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITED 429
            KC+CFLCGEEGHFAREC ++R+N+KRV +FE L+IPEDCEIVSVKEGE  SDAIYSI+E 
Sbjct: 880  KCKCFLCGEEGHFARECSSDRRNIKRVAIFEGLEIPEDCEIVSVKEGEAQSDAIYSISEG 939

Query: 430  EGD---LNANTLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEVPI 600
            E +    N N++ H  +F LR ED T+W+G   G+R  VKV+ ++H+C H W    E   
Sbjct: 940  EDNNEVHNLNSITHSSLFYLRAEDNTYWLG-GGGWRFAVKVTPQEHNCAHSWSYYEE--- 995

Query: 601  EQINCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIR--FNPHELIHS 774
            +   C  CK E  KR   +CS C  T CGMCS +Y   ++P  QE  +R  + P +L++ 
Sbjct: 996  QSRTCRFCKREVMKRFNAHCSKCSITTCGMCSNHYLGFQIPCQQEE-VRPVYEPRQLMNE 1054

Query: 775  QQDYIMFCEAEIKRLKSELEVL*VFKEENQELNKKMAQTVLAAQKSEEAANWKQKYYKLE 954
            Q  YI  CE EI RLK E+    +   EN+ ++ K+ + V      +E    + +  +L+
Sbjct: 1055 QMTYIKHCEEEIARLKQEVAAAKIL-SENEIVSMKIREAVETDTLRKENETLRLENERLQ 1113

Query: 955  EEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQR----IFSVEANEEPIM--KKG 1116
             EV D                     +     L+KS++     +   E   E ++     
Sbjct: 1114 LEVADLNKIIKGKQPIIPEDEELEELKQQVQQLKKSLEEKRLGVIICEGKGEQVLATTSS 1173

Query: 1117 KSILYNLKVDLEISNIPIFIVNAILDTGAT 1206
            ++ LYNL V+L I  I  F VNAILDTGAT
Sbjct: 1174 RNGLYNLVVELSIPGILPFSVNAILDTGAT 1203



 Score = 42.4 bits (98), Expect(2) = 3e-62
 Identities = 18/25 (72%), Positives = 20/25 (80%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVR 244
           R+S TYKGKPH +H RIE KKYL R
Sbjct: 848 RRSTTYKGKPHETHVRIEKKKYLER 872


>gb|APB42235.1| ORF3 [Dioscorea bacilliform virus]
          Length = 1897

 Score =  222 bits (566), Expect(2) = 7e-62
 Identities = 131/331 (39%), Positives = 185/331 (55%), Gaps = 11/331 (3%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITED 429
            +C+CFLCG EGHFARECPN+++N+KRV +FE L+IPEDCEIVSV EG+D SDAIYS++E 
Sbjct: 919  RCKCFLCGAEGHFARECPNDKRNIKRVAVFEGLEIPEDCEIVSVHEGDDLSDAIYSVSEG 978

Query: 430  EG----DLNANTLLH-EYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEV 594
            E     D   N  ++ E ++ LREED T+++G   G+R  VKVSQ++HDCKH W+     
Sbjct: 979  ENNEEIDQGVNVFINRETLYYLREEDHTYFLG-GGGWRCSVKVSQQEHDCKHRWDYYTNT 1037

Query: 595  PIEQINCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIR-FNPHELIH 771
              +   C  CK E  KR    C  C    CGMCS +Y D  +P  QE   + +NP +L+ 
Sbjct: 1038 ADK---CRFCKREVMKRWNARCQHCNILTCGMCSKHYVDLELPCQQEEIRQVYNPQQLMM 1094

Query: 772  SQQDYIMFCEAEIKRLKSELEVL*VFKEENQELNKKMAQTVLAAQKSEEAANWKQKYYKL 951
             QQ+YI  CE EI+RLK EL              KK+A+ ++ A +  EA + ++   +L
Sbjct: 1095 EQQNYIQSCEMEIQRLKDEL-----------AREKKVAEEMVVAARISEAVSQQESKKQL 1143

Query: 952  EEEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIFSVEANEEPI-----MKKG 1116
            EE  ++                    Q      +E     +   +  ++ +     +K+ 
Sbjct: 1144 EEMKLENDRLTLENEDLKKEIRSLKIQ------IEDMAVNVLICDGKDKHVAATLPLKER 1197

Query: 1117 KSILYNLKVDLEISNIPIFIVNAILDTGATT 1209
            ++ LYNL V+L+I       VNAILDTGATT
Sbjct: 1198 RNGLYNLIVELDIPGSTPLKVNAILDTGATT 1228



 Score = 45.8 bits (107), Expect(2) = 7e-62
 Identities = 20/32 (62%), Positives = 23/32 (71%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVRNKNVDVF 265
           R+S TYKGKPH SH RIE KK+LVR +    F
Sbjct: 892 RRSTTYKGKPHDSHVRIEKKKHLVRERRCKCF 923


>emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]
          Length = 1839

 Score =  218 bits (554), Expect(2) = 3e-61
 Identities = 134/328 (40%), Positives = 194/328 (59%), Gaps = 8/328 (2%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITED 429
            KC+C+LCG+EGHFARECPN+R++VKRV +FE +D+PE  +IVSV+EGE+ SDAIYSI+E+
Sbjct: 785  KCKCYLCGDEGHFARECPNQRRDVKRVAIFEGIDLPEGFDIVSVEEGEEESDAIYSISEN 844

Query: 430  E-GDLNANTLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEV-PIE 603
            E G+L+    +HE +FV+REED+++W+G T  +  MV+VS +Q+ C H WE N E+  + 
Sbjct: 845  EDGELDTEA-VHEKVFVMREEDQSYWLGKTNHWTAMVRVSSQQYHCMHQWEHNKEILVVA 903

Query: 604  QINCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIRFNPHELIHSQQD 783
             INCH CK  +Q R R++C  C  T C MC+  Y +  V    +  + FN H L+  Q  
Sbjct: 904  HINCHFCKQPTQLRSRIHCPTCQLTSCFMCAPIYCNIMVQQQPKPPVPFNSHTLLQQQAA 963

Query: 784  YIMFCEAEIKRLKSELEVL*VFKEENQELNKKMAQTVLAAQKSEEAA--NWKQKYYKLEE 957
            YI + E E +RL   +E    +K+E +EL  ++ + +   ++S E    N  +K   L+ 
Sbjct: 964  YIQWLEKENQRLTEAVE---FYKKEAEEL--RLERDLEQDRRSLEPTLLNKGKKVQILDP 1018

Query: 958  EVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIFSVEANEEPIMK--KGKSILY 1131
            E  D                    Q TAY L E ++ R+      ++ + K  K  ++LY
Sbjct: 1019 ESPD------------------EDQYTAY-LEEDTISRVIGHTVEQQEVRKPVKKGNMLY 1059

Query: 1132 NLKVDLEISNI--PIFIVNAILDTGATT 1209
            NL V L I  +  PI  V AILDTGATT
Sbjct: 1060 NLDVVLHIPEVGRPI-KVKAILDTGATT 1086



 Score = 48.5 bits (114), Expect(2) = 3e-61
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVRNK 250
           RKS+TYKGKPH SH R+E +K+L+RNK
Sbjct: 758 RKSRTYKGKPHASHARVEKRKHLIRNK 784


>ref|NP_041734.1| polyprotein [Cacao swollen shoot virus]
 gb|AAA03171.1| polyprotein [Cacao swollen shoot virus]
          Length = 1834

 Score =  216 bits (549), Expect(2) = 1e-60
 Identities = 127/324 (39%), Positives = 184/324 (56%), Gaps = 4/324 (1%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITED 429
            KC+C+LCG+EGHFARECPN+R++VKRV +FE +D+PE  +IVSV+EGE+ SDAIYSI+E+
Sbjct: 785  KCKCYLCGDEGHFARECPNQRRDVKRVAIFEGIDLPEGFDIVSVEEGEEESDAIYSISEN 844

Query: 430  EGDLNANTLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEV-PIEQ 606
            E       ++HE +F++REED+++W+G T  +  MV+VS +Q+ C H WE N E+  +  
Sbjct: 845  EDGELDTEVVHEKVFMMREEDQSYWLGKTNHWTAMVRVSSQQYHCMHQWEHNKEILVVAH 904

Query: 607  INCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIRFNPHELIHSQQDY 786
            INCH CK  +Q R R++C  C  T C MC+  Y +  V    +  + FN H L+  Q  Y
Sbjct: 905  INCHFCKQPTQLRSRIHCPTCQLTSCFMCAPIYCNMIVQQQPKPPVPFNTHTLLQQQAAY 964

Query: 787  IMFCEAEIKRLKSELEVL*VFKEENQELNKKMAQTVLAAQKSEEAANWKQKYYKLEEEVM 966
            I + E E +RL   +E    +K+E +EL  +               + +Q    LE  ++
Sbjct: 965  IQWLEKENQRLTEAVEF---YKKEAEELRLER--------------DLEQDRRSLEPTLL 1007

Query: 967  DFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIFSVEANEEPIMKKGK--SILYNLK 1140
            D                    Q TAY L E ++ R+      ++ + K  K  ++LYNL 
Sbjct: 1008 D-------KGKKVQILDPDEDQHTAY-LEEDTISRVIGHTVEQQEVRKPVKKGNMLYNLD 1059

Query: 1141 VDLEISNIPIFI-VNAILDTGATT 1209
            V L I  +   I V AILDTGATT
Sbjct: 1060 VVLHIPEVGRPIKVKAILDTGATT 1083



 Score = 48.5 bits (114), Expect(2) = 1e-60
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVRNK 250
           RKS+TYKGKPH SH R+E +K+L+RNK
Sbjct: 758 RKSRTYKGKPHASHARVEKRKHLIRNK 784


>gb|ANV20899.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1892

 Score =  220 bits (561), Expect(2) = 3e-60
 Identities = 132/330 (40%), Positives = 183/330 (55%), Gaps = 11/330 (3%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITED 429
            KC+CFLCGEEGHFAREC ++R+N+KRV +FE L+IPEDCEIVSVKEGE  SDAIY I+E 
Sbjct: 883  KCKCFLCGEEGHFARECSSDRRNIKRVAIFEGLEIPEDCEIVSVKEGEAQSDAIYPISEG 942

Query: 430  EGD---LNANTLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEVPI 600
            E +    N N++ H  +F LR ED T+W+G   G+R  VKV+ ++H+C H W    E   
Sbjct: 943  EDNNEVHNLNSITHSSLFYLRAEDNTYWLG-GGGWRFAVKVTPQEHNCAHSWSYYEE--- 998

Query: 601  EQINCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIR--FNPHELIHS 774
            +   C  CK E  KR   +CS C  T CGMCS +Y   ++P  QE  +R  + P +L++ 
Sbjct: 999  QSRTCRFCKREVMKRFNAHCSKCSITTCGMCSNHYLWFQIPCQQEE-VRPVYEPRQLMNE 1057

Query: 775  QQDYIMFCEAEIKRLKSELEVL*VFKEENQELNKKMAQTVLAAQKSEEAANWKQKYYKLE 954
            Q   I  CE EI RLK E+    +   EN+ ++ K+ + V      +E    + +  +L+
Sbjct: 1058 QMTCIKHCEEEIARLKQEVAAAKIL-SENEIVSMKIREAVETDTLRKENETLRLENERLQ 1116

Query: 955  EEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQR----IFSVEANEEPIM--KKG 1116
             EV D                     +     L+KS++     +   E   E ++     
Sbjct: 1117 LEVADLNKIIKGKQPIIPEDEELEELKQQVQQLKKSLEEKRLGVIICEGKGEQVLATTSS 1176

Query: 1117 KSILYNLKVDLEISNIPIFIVNAILDTGAT 1206
            ++ LYNL V+L I  I  F VNAILDTGAT
Sbjct: 1177 RNGLYNLVVELSIPGILPFSVNAILDTGAT 1206



 Score = 42.4 bits (98), Expect(2) = 3e-60
 Identities = 18/25 (72%), Positives = 20/25 (80%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVR 244
           R+S TYKGKPH +H RIE KKYL R
Sbjct: 851 RRSTTYKGKPHETHVRIEKKKYLER 875


>gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1921

 Score =  215 bits (547), Expect(2) = 1e-59
 Identities = 119/326 (36%), Positives = 186/326 (57%), Gaps = 6/326 (1%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITE- 426
            +C+CFLCG EGHFARECPN+++N+KRV +FE L++P+DCEIVSV+EG++ SDAIYS++E 
Sbjct: 926  RCKCFLCGNEGHFARECPNDKRNIKRVAVFEGLEVPDDCEIVSVQEGDNQSDAIYSVSEG 985

Query: 427  ---DEGDLNANTLLH-EYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEV 594
               D+     N  +  E ++ LR+ED  +++G   G+R  V+V+Q++HDC+H WE  +  
Sbjct: 986  EVADDVQQGVNVFIQKETLYYLRQEDNAYFLG-GGGWRCAVRVTQQEHDCRHQWEYYSPT 1044

Query: 595  PIEQINCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIR-FNPHELIH 771
                 NC  CK E  +R    CS C    CGMCS +Y    +P  +E   + +NP +L+ 
Sbjct: 1045 ---VANCRFCKREVMQRWNAKCSKCSILTCGMCSEHYLGLNIPCQREEIRQVYNPRQLMM 1101

Query: 772  SQQDYIMFCEAEIKRLKSELEVL*VFKEENQELNKKMAQTVLAAQKSEEAANWKQKYYKL 951
             QQ YI  CE EI+RLK E++ +           KK+A+  + A K  EA   K+   ++
Sbjct: 1102 EQQSYIQSCELEIQRLKEEIQNV-----------KKVAEEQVVAAKINEAVAVKEMQEQI 1150

Query: 952  EEEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIFSVEANEEPIMKKGKSILY 1131
            +E  ++                    ++   ++ E   ++  +  +     +K+ ++ LY
Sbjct: 1151 QELKLENDRLTLENHDLKELLKNKEPEQLEVLICEGKERQYIAAAS-----LKERRNGLY 1205

Query: 1132 NLKVDLEISNIPIFIVNAILDTGATT 1209
            NL V+++I      +VNAILDTGATT
Sbjct: 1206 NLMVEIDIPGSLPIMVNAILDTGATT 1231



 Score = 45.8 bits (107), Expect(2) = 1e-59
 Identities = 20/32 (62%), Positives = 23/32 (71%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVRNKNVDVF 265
           R+S TYKGKPH SH RIE KK+L+R K    F
Sbjct: 899 RRSTTYKGKPHDSHVRIEKKKHLMREKRCKCF 930


>gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1919

 Score =  215 bits (547), Expect(2) = 1e-59
 Identities = 119/326 (36%), Positives = 186/326 (57%), Gaps = 6/326 (1%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITE- 426
            +C+CFLCG EGHFARECPN+++N+KRV +FE L++P+DCEIVSV+EG++ SDAIYS++E 
Sbjct: 924  RCKCFLCGNEGHFARECPNDKRNIKRVAVFEGLEVPDDCEIVSVQEGDNQSDAIYSVSEG 983

Query: 427  ---DEGDLNANTLLH-EYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEV 594
               D+     N  +  E ++ LR+ED  +++G   G+R  V+V+Q++HDC+H WE  +  
Sbjct: 984  EVADDVQQGVNVFIQKETLYYLRQEDNAYFLG-GGGWRCAVRVTQQEHDCRHQWEYYSPT 1042

Query: 595  PIEQINCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIR-FNPHELIH 771
                 NC  CK E  +R    CS C    CGMCS +Y    +P  +E   + +NP +L+ 
Sbjct: 1043 ---VANCRFCKREVMQRWNAKCSKCSILTCGMCSEHYLGLNIPCQREEIRQVYNPRQLMM 1099

Query: 772  SQQDYIMFCEAEIKRLKSELEVL*VFKEENQELNKKMAQTVLAAQKSEEAANWKQKYYKL 951
             QQ YI  CE EI+RLK E++ +           KK+A+  + A K  EA   K+   ++
Sbjct: 1100 EQQSYIQSCELEIQRLKEEIQNV-----------KKVAEEQVVAAKINEAVAVKEMQEQI 1148

Query: 952  EEEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIFSVEANEEPIMKKGKSILY 1131
            +E  ++                    ++   ++ E   ++  +  +     +K+ ++ LY
Sbjct: 1149 QELKLENDRLTLENHDLKELLKNKEPEQLEVLICEGKERQYIAAAS-----LKERRNGLY 1203

Query: 1132 NLKVDLEISNIPIFIVNAILDTGATT 1209
            NL V+++I      +VNAILDTGATT
Sbjct: 1204 NLMVEIDIPGSLPIMVNAILDTGATT 1229



 Score = 45.8 bits (107), Expect(2) = 1e-59
 Identities = 20/32 (62%), Positives = 23/32 (71%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVRNKNVDVF 265
           R+S TYKGKPH SH RIE KK+L+R K    F
Sbjct: 897 RRSTTYKGKPHDSHVRIEKKKHLMREKRCKCF 928


>gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1921

 Score =  214 bits (545), Expect(2) = 2e-59
 Identities = 119/326 (36%), Positives = 186/326 (57%), Gaps = 6/326 (1%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITE- 426
            +C+CFLCG EGHFARECPN+++N+KRV +FE L++P+DCEIVSV+EG++ SDAIYS++E 
Sbjct: 926  RCKCFLCGNEGHFARECPNDKRNIKRVAVFEGLEVPDDCEIVSVQEGDNQSDAIYSVSEG 985

Query: 427  ---DEGDLNANTLLH-EYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEV 594
               D+     N  +  E ++ LR+ED  +++G   G+R  V+V+Q++HDC+H WE  +  
Sbjct: 986  EVADDVQQGVNVFIQKETLYYLRQEDNAYFLG-GGGWRCAVRVTQQEHDCRHQWEYYSPT 1044

Query: 595  PIEQINCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIR-FNPHELIH 771
                 NC  CK E  +R    CS C    CGMCS +Y    +P  +E   + +NP +L+ 
Sbjct: 1045 ---VANCRFCKREVMQRWNAKCSKCSILTCGMCSEHYLGLNIPCQREEIRQVYNPRQLMM 1101

Query: 772  SQQDYIMFCEAEIKRLKSELEVL*VFKEENQELNKKMAQTVLAAQKSEEAANWKQKYYKL 951
             QQ YI  CE EI+RLK E++ +           KK+A+  + A K  EA   K+   ++
Sbjct: 1102 EQQSYIQSCELEIQRLKEEIQNV-----------KKVAEEQVVAAKINEAVAVKEMQEQI 1150

Query: 952  EEEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIFSVEANEEPIMKKGKSILY 1131
            +E  ++                    ++   ++ E   ++  +  +     +K+ ++ LY
Sbjct: 1151 QELKLENDRLTLENHDLKELLKNKEPEQLEVLICEGKERQYIAAAS-----LKERRNGLY 1205

Query: 1132 NLKVDLEISNIPIFIVNAILDTGATT 1209
            NL V+++I      +VNAILDTGATT
Sbjct: 1206 NLIVEIDIPGSLPIMVNAILDTGATT 1231



 Score = 45.8 bits (107), Expect(2) = 2e-59
 Identities = 20/32 (62%), Positives = 23/32 (71%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVRNKNVDVF 265
           R+S TYKGKPH SH RIE KK+L+R K    F
Sbjct: 899 RRSTTYKGKPHDSHVRIEKKKHLMREKRCKCF 930


>gb|ASA40120.1| ORF3 [Dioscorea bacilliform virus]
          Length = 2005

 Score =  221 bits (564), Expect = 2e-59
 Identities = 135/344 (39%), Positives = 187/344 (54%), Gaps = 24/344 (6%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITED 429
            KC+CFLCGEEGH++RECPN++KNVKRV M E +D+P+D EI+SV+EG+  SDAIYS++E 
Sbjct: 1021 KCKCFLCGEEGHYSRECPNDKKNVKRVAMIEGMDLPDDYEIMSVQEGDPMSDAIYSLSEG 1080

Query: 430  EGDLNANTLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEVPIEQI 609
            E    A     E IF LRE D T+WIG  + +R  VKVS+  HDC H WEL+  +  +  
Sbjct: 1081 ECSKVAE---EEAIFYLRE-DGTYWIGKDDNWRVQVKVSKTVHDCPHSWELHPPMLGQVP 1136

Query: 610  NCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIRFNPHELIHSQQDYI 789
             C CCK ++Q+  R  CS C T  CGMC   Y++  VPV +     F+   ++  QQ YI
Sbjct: 1137 RCLCCKRDTQENWRAYCSRCQTVTCGMCGPNYFNLTVPVKKATPAFFDHKPMLEQQQLYI 1196

Query: 790  MFCEAEIKRLKSELEVL*VFKE-----------------------ENQELNKKMAQTVLA 900
             + E+EI RLK ELE+L    E                       EN+EL  ++A   L 
Sbjct: 1197 KWAESEIARLKGELEILKTTSEAKLKASEEEASRQKDAMRLEVDTENEELRHRVALLELK 1256

Query: 901  AQKSE-EAANWKQKYYKLEEEVMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIF 1077
                E E  + K +  +LE ++                      +ET   L+E+  ++I 
Sbjct: 1257 NDALELENHDHKVRIGELELQI---EGHELAEKMAAEEEEANAAEETVAYLIEEENEKIC 1313

Query: 1078 SVEANEEPIMKKGKSILYNLKVDLEISNIPIFIVNAILDTGATT 1209
            S E    P  ++G + LYNL  ++ I  +P F + AILDTGATT
Sbjct: 1314 SAETAIRP--RRGGNKLYNLTAEIIIPGVPPFKLRAILDTGATT 1355


>gb|ATZ69482.1| ORF3 polyprotein [Cacao swollen shoot Ghana M virus]
          Length = 1831

 Score =  211 bits (536), Expect(2) = 1e-58
 Identities = 128/326 (39%), Positives = 191/326 (58%), Gaps = 6/326 (1%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITED 429
            KC+C+LCG+EGHFARECPN +++VKRV +FE +D+PE  +I+SV+EGE  SDAIYSI+E+
Sbjct: 771  KCKCYLCGDEGHFARECPNSKRDVKRVAIFEGIDLPEGYDIISVEEGEAESDAIYSISEN 830

Query: 430  EGD-LNANTLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEV-PIE 603
            E + L    +  E +F+ REED+T+W+G    +  MVKVS +Q++C H WE N E+  + 
Sbjct: 831  EDEVLPEEGVKTEKVFMFREEDQTYWLGRKNHWTAMVKVSSQQYNCLHQWEHNQEITQVA 890

Query: 604  QINCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIRFNPHELIHSQQD 783
             + C+ CK ++  R R++CS C  T C MC+  Y +  V  A +  I +NP+ L+  QQ 
Sbjct: 891  YLKCYFCKQQTHIRSRIHCSTCTLTACFMCAPVYCNTTVQQAPKQAIPYNPNTLLQQQQG 950

Query: 784  YIMFCEAEIKRLKSELEVL*VFKEENQELNKKMAQTVLAAQKSEEAANWKQKYYKLEEEV 963
            YI + EAE KRL   +E   ++K E  EL  KM + +  +++  E    K+ + K  +  
Sbjct: 951  YIQWLEAENKRLAETVE---LYKHEIAEL--KMEKELELSRRELERETPKKPHGKGIQIK 1005

Query: 964  MDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIFSVEANEEPIMK--KGKSILYNL 1137
             D                    +++AY L E ++ R+      E+ + K  K  ++LYN+
Sbjct: 1006 ED-------------------DEQSAY-LEEDTIVRVIGHGTEEQQVSKPVKKGNMLYNM 1045

Query: 1138 KVDLEISNI--PIFIVNAILDTGATT 1209
             V L I  +  PI  V AILDTGATT
Sbjct: 1046 DVVLMIPEVGRPI-KVKAILDTGATT 1070



 Score = 46.2 bits (108), Expect(2) = 1e-58
 Identities = 17/27 (62%), Positives = 24/27 (88%)
 Frame = +2

Query: 170 RKSKTYKGKPHPSHTRIETKKYLVRNK 250
           R+SKTY+GKPH +H R+E +K+L+RNK
Sbjct: 744 RRSKTYRGKPHETHARVEKRKHLIRNK 770


>gb|ATW01249.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1904

 Score =  207 bits (527), Expect(2) = 7e-58
 Identities = 117/322 (36%), Positives = 179/322 (55%), Gaps = 3/322 (0%)
 Frame = +1

Query: 250  KCRCFLCGEEGHFARECPNERKNVKRVTMFEQLDIPEDCEIVSVKEGEDPSDAIYSITED 429
            KC+CFLCG EGHFARECP++++NVKR+ +FE ++IP+DC+IVSV+EG++ SD+I+S++E 
Sbjct: 936  KCKCFLCGAEGHFARECPSDKRNVKRIAIFEGMEIPDDCDIVSVQEGDEMSDSIFSVSEG 995

Query: 430  EGD---LNANTLLHEYIFVLREEDKTWWIGPTEGYRNMVKVSQRQHDCKHIWELNNEVPI 600
            EG     + N +L  ++  LR+ED  +++G   G+R  V+V+Q++HDC+H WE      +
Sbjct: 996  EGGEGLQSLNPILQHHLLYLRQEDGKYFLG-GGGWRAAVQVTQQEHDCRHQWEY---YLL 1051

Query: 601  EQINCHCCK*ESQKRHRMNCSLCCTTVCGMCSMYYYDKRVPVAQENTIRFNPHELIHSQQ 780
               +C  C+ E  KR    C  C    CG CS +Y    +P  +E    +NPH L++ QQ
Sbjct: 1052 NTGSCRFCRKEITKRWHAKCMHCSIVTCGFCSQHYVQLEIPCQKEEVQIYNPHRLLYEQQ 1111

Query: 781  DYIMFCEAEIKRLKSELEVL*VFKEENQELNKKMAQTVLAAQKSEEAANWKQKYYKLEEE 960
            +YI FCE E+++LK+  +      E+ + L   +   V   +  +E A  K +  +LE E
Sbjct: 1112 EYIKFCEVEMEKLKNAAKAAEKIAED-KILAASIRNAVEIEELRKELATVKLEKDRLELE 1170

Query: 961  VMDFXXXXXXXXXXXXXXXXXXXQETAYVLLEKSVQRIFSVEANEEPIMKKGKSILYNLK 1140
              D                     E   VL+    +++ +         K+ ++ LYNL 
Sbjct: 1171 NKDL-------------KRILEESEQVNVLICDGREKLVTASL----ASKEKRNGLYNLT 1213

Query: 1141 VDLEISNIPIFIVNAILDTGAT 1206
            V LEI       VNAILDTGAT
Sbjct: 1214 VQLEIPGSAPISVNAILDTGAT 1235



 Score = 47.4 bits (111), Expect(2) = 7e-58
 Identities = 21/32 (65%), Positives = 24/32 (75%)
 Frame = +2

Query: 170  RKSKTYKGKPHPSHTRIETKKYLVRNKNVDVF 265
            RKS TYKGKPH SH RIE +K+LVR+K    F
Sbjct: 909  RKSTTYKGKPHDSHVRIERRKHLVRSKKCKCF 940