BLASTX nr result
ID: Cheilocostus21_contig00059640
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00059640
(440 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AND76973.1| polyprotein, partial [Fig badnavirus 1] 99 2e-21
gb|AND76971.1| polyprotein, partial [Fig badnavirus 1] >gi|10269... 99 2e-21
gb|ANK58548.1| polyprotein [Fig badnavirus 1] 99 5e-21
gb|ANK58539.1| polyprotein [Fig badnavirus 1] 99 5e-21
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962... 99 5e-21
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration... 97 2e-20
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor... 97 2e-20
gb|ANK58545.1| polyprotein [Fig badnavirus 1] 96 3e-20
gb|ANK58542.1| polyprotein [Fig badnavirus 1] 96 3e-20
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1] 96 3e-20
gb|AND76972.1| polyprotein, partial [Fig badnavirus 1] 94 1e-19
gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus] 94 3e-19
gb|ASM61218.1| reverse transcriptase, partial [Cacao swollen sho... 87 4e-19
gb|ASM61219.1| reverse transcriptase, partial [Cacao swollen sho... 87 4e-19
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]... 93 4e-19
emb|CAA64701.1| polyprotein, partial [Dioscorea bacilliform virus] 91 5e-19
emb|CAA64274.1| unnamed protein product, partial [Dioscorea baci... 91 5e-19
gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus] 93 5e-19
gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus] 93 5e-19
gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus] 93 5e-19
>gb|AND76973.1| polyprotein, partial [Fig badnavirus 1]
Length = 397
Score = 98.6 bits (244), Expect = 2e-21
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTIL+KV SKI+SKFDLKSGFHQVAMH DSIEWT WVPDGL+EWLV
Sbjct: 73 LPGINTILKKVGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLV 124
>gb|AND76971.1| polyprotein, partial [Fig badnavirus 1]
gb|AND76974.1| polyprotein, partial [Fig badnavirus 1]
Length = 397
Score = 98.6 bits (244), Expect = 2e-21
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTIL+KV SKI+SKFDLKSGFHQVAMH DSIEWT WVPDGL+EWLV
Sbjct: 73 LPGINTILKKVGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLV 124
>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 98.6 bits (244), Expect = 5e-21
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTIL+KV SKI+SKFDLKSGFHQVAMH DSIEWT WVPDGL+EWLV
Sbjct: 1352 LPGINTILKKVGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLV 1403
>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 98.6 bits (244), Expect = 5e-21
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTIL+KV SKI+SKFDLKSGFHQVAMH DSIEWT WVPDGL+EWLV
Sbjct: 1352 LPGINTILKKVGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLV 1403
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
gb|AEF56561.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 98.6 bits (244), Expect = 5e-21
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTIL+KV SKI+SKFDLKSGFHQVAMH DSIEWT WVPDGL+EWLV
Sbjct: 1352 LPGINTILKKVGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLV 1403
>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1789
Score = 97.1 bits (240), Expect = 2e-20
Identities = 41/52 (78%), Positives = 47/52 (90%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTIL+++ SKI+SKFDLKSGFHQVAMH DSIEWT WVPDGL+EWLV
Sbjct: 1368 LPGINTILKRIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLV 1419
>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1830
Score = 97.1 bits (240), Expect = 2e-20
Identities = 41/52 (78%), Positives = 47/52 (90%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTIL+++ SKI+SKFDLKSGFHQVAMH DSIEWT WVPDGL+EWLV
Sbjct: 1331 LPGINTILKRIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLV 1382
>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 96.3 bits (238), Expect = 3e-20
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTIL+KV S I+SKFDLKSGFHQVAMH DSIEWT WVPDGL+EWLV
Sbjct: 1352 LPGINTILKKVGNSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLV 1403
>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 96.3 bits (238), Expect = 3e-20
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTIL+KV S I+SKFDLKSGFHQVAMH DSIEWT WVPDGL+EWLV
Sbjct: 1352 LPGINTILKKVGNSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLV 1403
>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
Length = 1846
Score = 96.3 bits (238), Expect = 3e-20
Identities = 41/52 (78%), Positives = 47/52 (90%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGI+TI++KV S+IYSKFDLKSGFHQVAMH DSIEWT WVPDGL+EWLV
Sbjct: 1348 LPGISTIMKKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLV 1399
>gb|AND76972.1| polyprotein, partial [Fig badnavirus 1]
Length = 397
Score = 93.6 bits (231), Expect = 1e-19
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTIL+KV SKI+SKFDLKSGFHQVAMH DSIEWT WVPDGL+E LV
Sbjct: 73 LPGINTILKKVGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEGLV 124
>gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]
Length = 1946
Score = 93.6 bits (231), Expect = 3e-19
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTI+++V SKIYSKFDLKSGFHQVAM DSIEWT WVP+GLFEWLV
Sbjct: 1548 LPGINTIIQRVGQSKIYSKFDLKSGFHQVAMDPDSIEWTAFWVPEGLFEWLV 1599
>gb|ASM61218.1| reverse transcriptase, partial [Cacao swollen shoot virus]
gb|ASM61220.1| reverse transcriptase, partial [Cacao swollen shoot virus]
gb|ASM61221.1| reverse transcriptase, partial [Cacao swollen shoot virus]
gb|ASM61222.1| reverse transcriptase, partial [Cacao swollen shoot virus]
gb|ASM61223.1| reverse transcriptase, partial [Cacao swollen shoot virus]
Length = 140
Score = 87.4 bits (215), Expect = 4e-19
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGI TIL++VS KI+SKFDLKSGFHQVAM K+SI WT WVP GL+EWLV
Sbjct: 10 LPGIQTILKRVSNKKIFSKFDLKSGFHQVAMAKESIPWTAFWVPQGLYEWLV 61
>gb|ASM61219.1| reverse transcriptase, partial [Cacao swollen shoot virus]
Length = 140
Score = 87.4 bits (215), Expect = 4e-19
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGI TIL++VS KI+SKFDLKSGFHQVAM K+SI WT WVP GL+EWLV
Sbjct: 10 LPGIQTILKRVSNKKIFSKFDLKSGFHQVAMAKESIPWTAFWVPQGLYEWLV 61
>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
gb|AHI90954.1| polyprotein [Hibiscus bacilliform virus GD1]
Length = 1892
Score = 93.2 bits (230), Expect = 4e-19
Identities = 39/52 (75%), Positives = 47/52 (90%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTI+++V +KIYSKFDLKSGFHQVAMH +SI+WT WVPDGL+EWLV
Sbjct: 1410 LPGINTIMKRVGHAKIYSKFDLKSGFHQVAMHPESIKWTAFWVPDGLYEWLV 1461
>emb|CAA64701.1| polyprotein, partial [Dioscorea bacilliform virus]
Length = 338
Score = 91.3 bits (225), Expect = 5e-19
Identities = 41/52 (78%), Positives = 45/52 (86%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTIL+KV SKIYSKFDLKSGFHQVAMH DSI+WT VP GL+EWLV
Sbjct: 211 LPGINTILKKVGNSKIYSKFDLKSGFHQVAMHPDSIQWTAFCVPGGLYEWLV 262
>emb|CAA64274.1| unnamed protein product, partial [Dioscorea bacilliform virus]
Length = 338
Score = 91.3 bits (225), Expect = 5e-19
Identities = 41/52 (78%), Positives = 45/52 (86%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTIL+KV SKIYSKFDLKSGFHQVAMH DSI+WT VP GL+EWLV
Sbjct: 211 LPGINTILKKVGNSKIYSKFDLKSGFHQVAMHPDSIQWTAFCVPGGLYEWLV 262
>gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus]
Length = 1919
Score = 92.8 bits (229), Expect = 5e-19
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTIL++V S+IYSKFDLKSGFHQVAM + SIEWT WVPDGLFEWLV
Sbjct: 1488 LPGINTILKRVGQSEIYSKFDLKSGFHQVAMDEGSIEWTAFWVPDGLFEWLV 1539
>gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus]
Length = 1921
Score = 92.8 bits (229), Expect = 5e-19
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTIL++V S+IYSKFDLKSGFHQVAM + SIEWT WVPDGLFEWLV
Sbjct: 1490 LPGINTILKRVGQSEIYSKFDLKSGFHQVAMDEGSIEWTAFWVPDGLFEWLV 1541
>gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus]
Length = 1921
Score = 92.8 bits (229), Expect = 5e-19
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = -1
Query: 371 IPGINTILRKVSTSKIYSKFDLKSGFHQVAMHKDSIEWTVLWVPDGLFEWLV 216
+PGINTIL++V S+IYSKFDLKSGFHQVAM + SIEWT WVPDGLFEWLV
Sbjct: 1490 LPGINTILKRVGQSEIYSKFDLKSGFHQVAMDEGSIEWTAFWVPDGLFEWLV 1541