BLASTX nr result
ID: Cheilocostus21_contig00059529
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00059529
(626 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABN15089.1| polyprotein, partial [Citrus yellow mosaic virus] 152 2e-42
gb|ABN15091.1| polyprotein, partial [Citrus yellow mosaic virus] 149 2e-42
gb|ABQ45369.1| polyprotein, partial [Citrus yellow mosaic virus] 150 2e-42
gb|ABN15090.1| polyprotein, partial [Citrus yellow mosaic virus] 151 2e-42
gb|ABQ45368.1| polyprotein, partial [Citrus yellow mosaic virus] 150 3e-42
gb|ASM61328.1| pepsin-like aspartate protease, partial [Cacao sw... 150 1e-41
gb|ASM61329.1| pepsin-like aspartate protease, partial [Cacao sw... 150 7e-41
gb|PKU61844.1| RNA-directed DNA polymerase [Dendrobium catenatum] 152 7e-40
ref|NP_569153.1| unknown [Citrus yellow mosaic virus] >gi|164169... 154 1e-39
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] >gi|5403574... 154 2e-39
gb|AIK01820.1| ORF3 [Piper yellow mottle virus] 153 3e-39
gb|AER00538.1| ORF III [Citrus yellow mosaic virus] 153 3e-39
gb|ACH86211.1| unknown [Citrus yellow mosaic virus] 153 3e-39
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 153 4e-39
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus] 152 5e-39
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus] 152 5e-39
gb|AND74069.1| coat protein, partial [Cacao swollen shoot virus] 144 6e-39
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1] 152 7e-39
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 152 7e-39
gb|AAW30012.1| polyprotein, partial [Citrus yellow mosaic virus] 146 8e-39
>gb|ABN15089.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 226
Score = 152 bits (383), Expect = 2e-42
Identities = 76/140 (54%), Positives = 98/140 (70%), Gaps = 9/140 (6%)
Frame = -3
Query: 396 QTIIVISRASVHVTKSHQFK*N-FNLSL--------VFTLHAILDTGATTCCIDSNSVPQ 244
+T +I+ VTK+ K +N+ + FT+ AILDTGATTCCIDS SVP+
Sbjct: 11 RTTRIIAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVPK 70
Query: 243 DGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTFRIPFTYSFPMTLGDDIQMILGCN 64
D LE NS ++ FSGINS+Q QK+K G+M I + FRIP+ YSF M +GD IQ+ILGCN
Sbjct: 71 DALEENSFVVNFSGINSKQQVKQKIKAGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCN 130
Query: 63 FIKSMHGGVRIEGTTVTFYK 4
FI+SM+GGVR+EG T+TFYK
Sbjct: 131 FIRSMYGGVRLEGNTITFYK 150
>gb|ABN15091.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 161
Score = 149 bits (377), Expect = 2e-42
Identities = 68/103 (66%), Positives = 84/103 (81%)
Frame = -3
Query: 312 FTLHAILDTGATTCCIDSNSVPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTF 133
FT+ AILDTGATTCCIDS SVP+D LE NS ++ FSGINS+Q QK+K G+M I + F
Sbjct: 15 FTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKAGKMFISEHYF 74
Query: 132 RIPFTYSFPMTLGDDIQMILGCNFIKSMHGGVRIEGTTVTFYK 4
RIP+ YSF M +GD IQ+I+GCNFI+SM+GGVR+EG T+TFYK
Sbjct: 75 RIPYCYSFEMQIGDGIQLIVGCNFIRSMYGGVRLEGNTITFYK 117
>gb|ABQ45369.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 196
Score = 150 bits (380), Expect = 2e-42
Identities = 69/103 (66%), Positives = 84/103 (81%)
Frame = -3
Query: 312 FTLHAILDTGATTCCIDSNSVPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTF 133
FT+ AILDTGATTCCIDS SVP+D LE NS ++ FSGINS+Q QK+K G+M I + F
Sbjct: 18 FTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKAGKMFINEHYF 77
Query: 132 RIPFTYSFPMTLGDDIQMILGCNFIKSMHGGVRIEGTTVTFYK 4
RIP+ YSF M +GD IQ+ILGCNFI+SM+GGVR+EG T+TFYK
Sbjct: 78 RIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYK 120
>gb|ABN15090.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 226
Score = 151 bits (382), Expect = 2e-42
Identities = 75/140 (53%), Positives = 98/140 (70%), Gaps = 9/140 (6%)
Frame = -3
Query: 396 QTIIVISRASVHVTKSHQFK*N-FNLSL--------VFTLHAILDTGATTCCIDSNSVPQ 244
+T +++ VTK+ K +N+ + FT+ AILDTGATTCCIDS SVP+
Sbjct: 11 RTTRIVAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVPK 70
Query: 243 DGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTFRIPFTYSFPMTLGDDIQMILGCN 64
D LE NS ++ FSGINS+Q QK+K G+M I + FRIP+ YSF M +GD IQ+ILGCN
Sbjct: 71 DALEENSFVVNFSGINSKQQVRQKIKAGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCN 130
Query: 63 FIKSMHGGVRIEGTTVTFYK 4
FI+SM+GGVR+EG T+TFYK
Sbjct: 131 FIRSMYGGVRLEGNTITFYK 150
>gb|ABQ45368.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 207
Score = 150 bits (380), Expect = 3e-42
Identities = 69/103 (66%), Positives = 84/103 (81%)
Frame = -3
Query: 312 FTLHAILDTGATTCCIDSNSVPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTF 133
FT+ AILDTGATTCCIDS SVP+D LE NS ++ FSGINS+Q QK+K G+M I + F
Sbjct: 28 FTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKAGKMFINEHYF 87
Query: 132 RIPFTYSFPMTLGDDIQMILGCNFIKSMHGGVRIEGTTVTFYK 4
RIP+ YSF M +GD IQ+ILGCNFI+SM+GGVR+EG T+TFYK
Sbjct: 88 RIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYK 130
>gb|ASM61328.1| pepsin-like aspartate protease, partial [Cacao swollen shoot virus]
Length = 257
Score = 150 bits (380), Expect = 1e-41
Identities = 73/132 (55%), Positives = 97/132 (73%), Gaps = 11/132 (8%)
Frame = -3
Query: 363 HVTKSHQFK*N--FNLSLVFTL---------HAILDTGATTCCIDSNSVPQDGLESNSSI 217
H TK+ + N +NL ++ ++ AILDTGATTCC+D NSVP++ +E N+ +
Sbjct: 46 HTTKAVTNRGNMLYNLDVILSIPDVKFPIKVKAILDTGATTCCVDINSVPKEAIEQNTFL 105
Query: 216 IQFSGINSQQTATQKLKNGRMHIGSNTFRIPFTYSFPMTLGDDIQMILGCNFIKSMHGGV 37
+QF GINSQQ +KLK GRM I + FRIP+ Y+FP+TLGD IQMILGCNFI++M+GG+
Sbjct: 106 VQFRGINSQQNVDKKLKYGRMTISDHNFRIPYCYAFPLTLGDGIQMILGCNFIRNMYGGL 165
Query: 36 RIEGTTVTFYKN 1
RIEG T+TFYKN
Sbjct: 166 RIEGHTITFYKN 177
>gb|ASM61329.1| pepsin-like aspartate protease, partial [Cacao swollen shoot virus]
Length = 329
Score = 150 bits (380), Expect = 7e-41
Identities = 73/132 (55%), Positives = 97/132 (73%), Gaps = 11/132 (8%)
Frame = -3
Query: 363 HVTKSHQFK*N--FNLSLVFTL---------HAILDTGATTCCIDSNSVPQDGLESNSSI 217
H TK+ + N +NL ++ ++ AILDTGATTCC+D NSVP++ +E N+ +
Sbjct: 87 HTTKAVTNRGNMLYNLDVILSIPDVKFPIKVKAILDTGATTCCVDINSVPKEAIEQNTFL 146
Query: 216 IQFSGINSQQTATQKLKNGRMHIGSNTFRIPFTYSFPMTLGDDIQMILGCNFIKSMHGGV 37
+QF GINSQQ +KLK GRM I + FRIP+ Y+FP+TLGD IQMILGCNFI++M+GG+
Sbjct: 147 VQFRGINSQQNVDKKLKYGRMTISDHNFRIPYCYAFPLTLGDGIQMILGCNFIRNMYGGL 206
Query: 36 RIEGTTVTFYKN 1
RIEG T+TFYKN
Sbjct: 207 RIEGHTITFYKN 218
>gb|PKU61844.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 531
Score = 152 bits (384), Expect = 7e-40
Identities = 68/104 (65%), Positives = 84/104 (80%)
Frame = -3
Query: 312 FTLHAILDTGATTCCIDSNSVPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTF 133
F + AILDTGATTCCID + +PQD LE N ++ F G+NS+ TA +KLK GRM IG F
Sbjct: 79 FKVLAILDTGATTCCIDQSVIPQDALEPNPFLVHFKGVNSETTADKKLKGGRMVIGDQQF 138
Query: 132 RIPFTYSFPMTLGDDIQMILGCNFIKSMHGGVRIEGTTVTFYKN 1
RIP+TY+FPM +G+DIQM++GCNFI++MHGGVRIEG VTFYKN
Sbjct: 139 RIPYTYAFPMKIGEDIQMLIGCNFIRAMHGGVRIEGDEVTFYKN 182
>ref|NP_569153.1| unknown [Citrus yellow mosaic virus]
gb|AAL18495.1|AF347695_3 unknown [Citrus yellow mosaic virus]
Length = 1983
Score = 154 bits (390), Expect = 1e-39
Identities = 78/143 (54%), Positives = 99/143 (69%), Gaps = 9/143 (6%)
Frame = -3
Query: 405 NKLQTIIVISRASVHVTKSHQFK*N-FNLSL--------VFTLHAILDTGATTCCIDSNS 253
N +T +I+ VTK+ K +N+ + FT+ AILDTGATTCCIDS S
Sbjct: 1163 NPEETTRIIAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRS 1222
Query: 252 VPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTFRIPFTYSFPMTLGDDIQMIL 73
VP+D LE NS ++ FSGINS+Q QKLK G+M I + FRIP+ YSF M +GD IQ+IL
Sbjct: 1223 VPKDALEENSFVVNFSGINSKQQVKQKLKTGKMFINEHYFRIPYCYSFEMQIGDGIQLIL 1282
Query: 72 GCNFIKSMHGGVRIEGTTVTFYK 4
GCNFI+SM+GGVR+EG T+TFYK
Sbjct: 1283 GCNFIRSMYGGVRLEGNTITFYK 1305
>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus]
gb|AGV08293.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 154 bits (388), Expect = 2e-39
Identities = 69/103 (66%), Positives = 85/103 (82%)
Frame = -3
Query: 312 FTLHAILDTGATTCCIDSNSVPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTF 133
FT++AILDTGATTCCID +PQ+ LE+N ++ F GINS+ TA +KLK GRM IG F
Sbjct: 1200 FTVNAILDTGATTCCIDERVIPQEALEANPYLVHFRGINSKTTANKKLKYGRMIIGDQQF 1259
Query: 132 RIPFTYSFPMTLGDDIQMILGCNFIKSMHGGVRIEGTTVTFYK 4
++P+TY+FPMT+ DDIQMILGCNFI++MHGGVRIEG VTFYK
Sbjct: 1260 KVPYTYAFPMTISDDIQMILGCNFIRAMHGGVRIEGNEVTFYK 1302
>gb|AIK01820.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 153 bits (387), Expect = 3e-39
Identities = 68/103 (66%), Positives = 85/103 (82%)
Frame = -3
Query: 312 FTLHAILDTGATTCCIDSNSVPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTF 133
FT++AILDTGATTCC+D +PQ+ LE+N ++ F GINS+ TA +KLK GRM IG F
Sbjct: 1201 FTVNAILDTGATTCCVDERVIPQEALEANPYLVHFRGINSKTTANKKLKYGRMIIGDQQF 1260
Query: 132 RIPFTYSFPMTLGDDIQMILGCNFIKSMHGGVRIEGTTVTFYK 4
++P+TY+FPMT+ DDIQMILGCNFI++MHGGVRIEG VTFYK
Sbjct: 1261 KVPYTYAFPMTISDDIQMILGCNFIRAMHGGVRIEGNEVTFYK 1303
>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
Length = 1982
Score = 153 bits (387), Expect = 3e-39
Identities = 78/143 (54%), Positives = 99/143 (69%), Gaps = 9/143 (6%)
Frame = -3
Query: 405 NKLQTIIVISRASVHVTKSHQFK*N-FNLSL--------VFTLHAILDTGATTCCIDSNS 253
N +T +I+ VTK+ K +N+ + FT+ AILDTGATTCCIDS S
Sbjct: 1162 NPEETTRIIAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRS 1221
Query: 252 VPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTFRIPFTYSFPMTLGDDIQMIL 73
VP+D LE NS ++ FSGINS+Q QKLK G+M I + FRIP+ YSF M +GD IQ+IL
Sbjct: 1222 VPKDALEENSFVVNFSGINSKQQVKQKLKAGKMFINEHYFRIPYCYSFVMQIGDGIQLIL 1281
Query: 72 GCNFIKSMHGGVRIEGTTVTFYK 4
GCNFI+SM+GGVR+EG T+TFYK
Sbjct: 1282 GCNFIRSMYGGVRLEGNTITFYK 1304
>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
Length = 1490
Score = 153 bits (386), Expect = 3e-39
Identities = 77/143 (53%), Positives = 99/143 (69%), Gaps = 9/143 (6%)
Frame = -3
Query: 405 NKLQTIIVISRASVHVTKSHQFK*N-FNLSL--------VFTLHAILDTGATTCCIDSNS 253
N +T +I+ VTK+ K +N+ + FT+ AILDTGATTCCIDS S
Sbjct: 671 NPEETTRIIAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRS 730
Query: 252 VPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTFRIPFTYSFPMTLGDDIQMIL 73
VP+D LE NS ++ FSGINS+Q QK+K G+M I + FRIP+ YSF M +GD IQ+IL
Sbjct: 731 VPKDALEENSFVVNFSGINSKQQVKQKIKAGKMFINEHYFRIPYCYSFEMQIGDGIQLIL 790
Query: 72 GCNFIKSMHGGVRIEGTTVTFYK 4
GCNFI+SM+GGVR+EG T+TFYK
Sbjct: 791 GCNFIRSMYGGVRLEGNTITFYK 813
>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
Length = 1967
Score = 153 bits (386), Expect = 4e-39
Identities = 77/143 (53%), Positives = 99/143 (69%), Gaps = 9/143 (6%)
Frame = -3
Query: 405 NKLQTIIVISRASVHVTKSHQFK*N-FNLSL--------VFTLHAILDTGATTCCIDSNS 253
N +T +++ VTK+ K +N+ + FT+ AILDTGATTCCIDS S
Sbjct: 1147 NPEETTRIVAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRS 1206
Query: 252 VPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTFRIPFTYSFPMTLGDDIQMIL 73
VP+D LE NS ++ FSGINS+Q QK+K G+M I + FRIP+ YSF M +GD IQ+IL
Sbjct: 1207 VPKDALEENSFVVNFSGINSKQQVKQKIKAGKMFINEHYFRIPYCYSFEMQIGDGIQLIL 1266
Query: 72 GCNFIKSMHGGVRIEGTTVTFYK 4
GCNFI+SM+GGVR+EG TVTFYK
Sbjct: 1267 GCNFIRSMYGGVRLEGNTVTFYK 1289
>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
Length = 1976
Score = 152 bits (385), Expect = 5e-39
Identities = 76/143 (53%), Positives = 99/143 (69%), Gaps = 9/143 (6%)
Frame = -3
Query: 405 NKLQTIIVISRASVHVTKSHQFK*N-FNLSL--------VFTLHAILDTGATTCCIDSNS 253
N +T +++ VTK+ K +N+ + FT+ AILDTGATTCCIDS S
Sbjct: 1155 NPEETTRIVAHGDTQVTKTRPVKNMLYNMDVRIEIPGIPAFTVKAILDTGATTCCIDSRS 1214
Query: 252 VPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTFRIPFTYSFPMTLGDDIQMIL 73
VP+D LE NS ++ FSGINS+Q QK+K G+M I + FRIP+ YSF M +GD IQ+IL
Sbjct: 1215 VPKDALEENSFVVNFSGINSKQQVKQKIKPGKMFISEHYFRIPYCYSFEMQIGDGIQLIL 1274
Query: 72 GCNFIKSMHGGVRIEGTTVTFYK 4
GCNFI+SM+GGVR+EG T+TFYK
Sbjct: 1275 GCNFIRSMYGGVRLEGNTITFYK 1297
>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
Length = 1979
Score = 152 bits (385), Expect = 5e-39
Identities = 76/143 (53%), Positives = 99/143 (69%), Gaps = 9/143 (6%)
Frame = -3
Query: 405 NKLQTIIVISRASVHVTKSHQFK*N-FNLSL--------VFTLHAILDTGATTCCIDSNS 253
N +T +++ VTK+ K +N+ + FT+ AILDTGATTCCIDS S
Sbjct: 1157 NPEETTRIVAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRS 1216
Query: 252 VPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTFRIPFTYSFPMTLGDDIQMIL 73
VP+D LE NS ++ FSGINS+Q QK+K G+M I + FRIP+ YSF M +GD IQ+IL
Sbjct: 1217 VPKDALEENSFVVNFSGINSKQQVKQKIKPGKMFISEHYFRIPYCYSFEMQIGDGIQLIL 1276
Query: 72 GCNFIKSMHGGVRIEGTTVTFYK 4
GCNFI+SM+GGVR+EG T+TFYK
Sbjct: 1277 GCNFIRSMYGGVRLEGNTITFYK 1299
>gb|AND74069.1| coat protein, partial [Cacao swollen shoot virus]
Length = 262
Score = 144 bits (362), Expect = 6e-39
Identities = 65/100 (65%), Positives = 83/100 (83%)
Frame = -3
Query: 300 AILDTGATTCCIDSNSVPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTFRIPF 121
AILDTGATTCCI+ NSVPQ +E N+ ++QF GINS Q+ +KLK GRM I ++ FRIP+
Sbjct: 146 AILDTGATTCCININSVPQTAIEQNTFLVQFRGINSTQSVDKKLKYGRMTISNHQFRIPY 205
Query: 120 TYSFPMTLGDDIQMILGCNFIKSMHGGVRIEGTTVTFYKN 1
Y+FP++LGD I+MILGCNFI+ M+GG+RIEG T+TFYKN
Sbjct: 206 CYAFPLSLGDGIEMILGCNFIRGMYGGLRIEGHTITFYKN 245
>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
Length = 1846
Score = 152 bits (384), Expect = 7e-39
Identities = 67/104 (64%), Positives = 86/104 (82%)
Frame = -3
Query: 312 FTLHAILDTGATTCCIDSNSVPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTF 133
F++ AILDTGATTCCID S+P++ LE N+ +++FSG+NS TA +KLK GRM IG N F
Sbjct: 1078 FSVKAILDTGATTCCIDQESIPKEALEENTYLVRFSGVNSTMTANKKLKGGRMFIGENMF 1137
Query: 132 RIPFTYSFPMTLGDDIQMILGCNFIKSMHGGVRIEGTTVTFYKN 1
RIP+TYSFP+ + D +QMI+GCNFI++M+GGVRIEG VTFYKN
Sbjct: 1138 RIPYTYSFPIKMEDGVQMIVGCNFIRAMYGGVRIEGNVVTFYKN 1181
>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
Length = 1968
Score = 152 bits (384), Expect = 7e-39
Identities = 76/143 (53%), Positives = 99/143 (69%), Gaps = 9/143 (6%)
Frame = -3
Query: 405 NKLQTIIVISRASVHVTKSHQFK*N-FNLSL--------VFTLHAILDTGATTCCIDSNS 253
N +T +++ VTK+ + +N+ + FT+ AILDTGATTCCIDS S
Sbjct: 1148 NPEETTRIVAHGDTQVTKTRPVRNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRS 1207
Query: 252 VPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTFRIPFTYSFPMTLGDDIQMIL 73
VP+D LE NS ++ FSGINS+Q QKLK G+M I + FRIP+ YSF M +GD IQ+IL
Sbjct: 1208 VPKDALEENSFVVNFSGINSKQQVKQKLKAGKMFINEHYFRIPYCYSFEMQIGDGIQLIL 1267
Query: 72 GCNFIKSMHGGVRIEGTTVTFYK 4
GCNFI+SM+GGVR+EG T+TFYK
Sbjct: 1268 GCNFIRSMYGGVRLEGNTITFYK 1290
>gb|AAW30012.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 357
Score = 146 bits (368), Expect = 8e-39
Identities = 68/98 (69%), Positives = 80/98 (81%)
Frame = -3
Query: 297 ILDTGATTCCIDSNSVPQDGLESNSSIIQFSGINSQQTATQKLKNGRMHIGSNTFRIPFT 118
ILDTGATTCCIDS SVP+D LE NS ++ FSGINS+Q QKLK G+M I + FRIP+
Sbjct: 1 ILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKLKAGKMFINEHYFRIPYC 60
Query: 117 YSFPMTLGDDIQMILGCNFIKSMHGGVRIEGTTVTFYK 4
YSF M +GD IQ+ILGCNFI+SM+GGVR+EG TVTFYK
Sbjct: 61 YSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTVTFYK 98