BLASTX nr result

ID: Cheilocostus21_contig00059119 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00059119
         (409 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009413003.1| PREDICTED: transcriptional regulator ATRX-li...    52   2e-07
ref|XP_009413010.1| PREDICTED: transcriptional regulator ATRX-li...    52   2e-07

>ref|XP_009413003.1| PREDICTED: transcriptional regulator ATRX-like isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 594

 Score = 52.0 bits (123), Expect(2) = 2e-07
 Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
 Frame = +1

Query: 259 GHHVDILRVAPPSEPTRKSRRVSKRHI-SDEEEDYEIHFLEKQRTSKIGTD 408
           G   D L + P S PTRKS+RV KR +  D+EED EI +LEK ++SK+  D
Sbjct: 269 GKQTDKLHMLPSSAPTRKSKRVPKRRMFDDDEEDEEIRYLEKLKSSKVSAD 319



 Score = 30.4 bits (67), Expect(2) = 2e-07
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
 Frame = +3

Query: 159 ERVNGSQGDKINETTRSSFAHGIK------VKEICC*GKWTSCRH 275
           ER NGSQGD+  + + SSF HG++      V E    GK T   H
Sbjct: 232 ERGNGSQGDQGKQLSGSSFIHGMEEASTATVAEASLVGKQTDKLH 276


>ref|XP_009413010.1| PREDICTED: transcriptional regulator ATRX-like isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 592

 Score = 52.0 bits (123), Expect(2) = 2e-07
 Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
 Frame = +1

Query: 259 GHHVDILRVAPPSEPTRKSRRVSKRHI-SDEEEDYEIHFLEKQRTSKIGTD 408
           G   D L + P S PTRKS+RV KR +  D+EED EI +LEK ++SK+  D
Sbjct: 267 GKQTDKLHMLPSSAPTRKSKRVPKRRMFDDDEEDEEIRYLEKLKSSKVSAD 317



 Score = 30.4 bits (67), Expect(2) = 2e-07
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
 Frame = +3

Query: 159 ERVNGSQGDKINETTRSSFAHGIK------VKEICC*GKWTSCRH 275
           ER NGSQGD+  + + SSF HG++      V E    GK T   H
Sbjct: 230 ERGNGSQGDQGKQLSGSSFIHGMEEASTATVAEASLVGKQTDKLH 274


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