BLASTX nr result
ID: Cheilocostus21_contig00058750
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00058750
(1053 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [M... 76 5e-38
gb|OTF86030.1| putative ribonuclease H-like domain-containing pr... 81 7e-37
gb|PRQ37607.1| putative RNA-directed DNA polymerase [Rosa chinen... 82 7e-37
gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar] 77 9e-37
emb|CAN63534.1| hypothetical protein VITISV_001206 [Vitis vinifera] 77 9e-37
emb|CAN71748.1| hypothetical protein VITISV_019194 [Vitis vinifera] 77 2e-36
emb|CAN71132.1| hypothetical protein VITISV_007235 [Vitis vinifera] 75 3e-36
gb|PRQ60115.1| putative RNA-directed DNA polymerase [Rosa chinen... 87 3e-36
gb|PRQ53465.1| putative RNA-directed DNA polymerase [Rosa chinen... 86 3e-36
gb|PRQ35290.1| putative RNA-directed DNA polymerase [Rosa chinen... 82 3e-36
gb|PRQ52323.1| putative RNA-directed DNA polymerase [Rosa chinen... 86 3e-36
gb|PRQ60568.1| putative RNA-directed DNA polymerase [Rosa chinen... 87 4e-36
gb|PRQ42187.1| putative RNA-directed DNA polymerase [Rosa chinen... 87 4e-36
gb|KOM38790.1| hypothetical protein LR48_Vigan03g217200 [Vigna a... 75 8e-36
gb|EXC35359.1| Retrovirus-related Pol polyprotein from transposo... 77 8e-36
gb|KOM52479.1| hypothetical protein LR48_Vigan09g113800 [Vigna a... 76 8e-36
gb|AAT38747.2| Polyprotein, putative [Solanum demissum] 72 1e-35
emb|CAN65144.1| hypothetical protein VITISV_026080 [Vitis vinifera] 77 1e-35
gb|KYP63559.1| Retrovirus-related Pol polyprotein from transposo... 70 2e-35
gb|PNX96430.1| retrovirus-related Pol polyprotein from transposo... 75 2e-35
>emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [Malus domestica]
Length = 1390
Score = 75.9 bits (185), Expect(4) = 5e-38
Identities = 41/84 (48%), Positives = 51/84 (60%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
MD+E AL TWE+ G + V CR V+ VKY DG+I YK L+AKG+ Y V
Sbjct: 897 MDEEMLALQKNNTWEVTSLPEGKKTVGCRWVFTVKYQADGSIDRYKARLVAKGYTQTYGV 956
Query: 697 DYLNTFSPVAELNSFGVLFYLATN 626
DY TFSPVA++N+ VL LA N
Sbjct: 957 DYQETFSPVAKMNTVRVLISLAAN 980
Score = 71.2 bits (173), Expect(4) = 5e-38
Identities = 35/88 (39%), Positives = 54/88 (61%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H F+ + + L IYVD++ TG I +++S+ +F +K +G L+YF G+E+
Sbjct: 1056 HTLFVKRRQEKVTALIIYVDDMIITGDDFDEISKLQSNLAAEFEMKSLGDLKYFLGVEVA 1115
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
+ G+FLS RKY LDLL+ET + G KP
Sbjct: 1116 RSLKGIFLSQRKYVLDLLKETGMLGCKP 1143
Score = 50.1 bits (118), Expect(4) = 5e-38
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = -2
Query: 644 ILFSY*SNLEHVLE--GNKNTFLHGNLTRNVYIKQPLRNVTHEVKQI*KHDKAIYKLKQS 471
+L S +N++ L+ KN FLHGNL VY+ P + + K++Y LKQS
Sbjct: 973 VLISLAANMDWPLKQFDVKNAFLHGNLEEEVYMDFPPGYSVGRNTGVCRLRKSLYGLKQS 1032
Query: 470 TKAWIDKFSYVVAQFGLILYATKHTI 393
+AW D+F+ V+ + G + HT+
Sbjct: 1033 PRAWFDRFTQVMKRIGYYQSHSDHTL 1058
Score = 31.2 bits (69), Expect(4) = 5e-38
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TPI + LC D ++ D +Y +LV I L TR DI+Y
Sbjct: 1146 TPIVEKHHLCLDPNQESIDKGRYQRLVGRLIYLAHTRPDIAY 1187
>gb|OTF86030.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1532
Score = 80.9 bits (198), Expect(4) = 7e-37
Identities = 40/85 (47%), Positives = 55/85 (64%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
M++E +AL TWE L G + V CR V+ +KY DGTI+ YK L+AKG+ Y +
Sbjct: 1034 MEEEMKALTKNNTWEKCALLVGKKTVGCRWVFTIKYKPDGTIERYKARLVAKGYTQTYGI 1093
Query: 697 DYLNTFSPVAELNSFGVLFYLATNQ 623
DY TFSPVA++N+ VLF +A N+
Sbjct: 1094 DYSETFSPVAKINTIRVLFSVAANK 1118
Score = 71.6 bits (174), Expect(4) = 7e-37
Identities = 36/88 (40%), Positives = 55/88 (62%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H F+ Q ++I L IYVD++ TG + I ++K + +F +KD+G+L+YF GIE++
Sbjct: 1194 HTLFLKQRNNLITCLIIYVDDMIITGNDKEEITKLKKNLFTEFEMKDLGRLKYFLGIEVL 1253
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
G+F+ +KY LDLL ET L KP
Sbjct: 1254 RSKQGIFMCQKKYVLDLLAETGLIDCKP 1281
Score = 46.6 bits (109), Expect(4) = 7e-37
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = -2
Query: 596 KNTFLHGNLTRNVYIKQPLR-NVTHEVKQI*KHDKAIYKLKQSTKAWIDKFSYVVAQFGL 420
KN FLHG L VY++ P V +++ + K++Y LKQS +AW +F+ + +G
Sbjct: 1128 KNAFLHGELKEEVYMEAPHGFTVNFGEREVCRLKKSLYGLKQSPRAWFGRFTLAMKNYGF 1187
Query: 419 ILYATKHTI 393
+ HT+
Sbjct: 1188 KQSNSDHTL 1196
Score = 25.4 bits (54), Expect(4) = 7e-37
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TP+ + KL ++ ++ D +Y ++V I L TR DI+Y
Sbjct: 1284 TPMIANQKLYIEETAEPADRERYQRIVGKLIYLSHTRPDIAY 1325
>gb|PRQ37607.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1149
Score = 81.6 bits (200), Expect(4) = 7e-37
Identities = 42/85 (49%), Positives = 55/85 (64%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
M++E EAL TWELVP G + V CR V+ VK N DGTI YK L+AKG+ Y +
Sbjct: 667 MNEELEALQKNATWELVPMPVGKKTVGCRWVFTVKLNADGTINRYKARLVAKGYTQRYGI 726
Query: 697 DYLNTFSPVAELNSFGVLFYLATNQ 623
DY TF+PVA++N+ +L LA N+
Sbjct: 727 DYEETFAPVAKINTVRILISLAANK 751
Score = 66.6 bits (161), Expect(4) = 7e-37
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H FI + I L +YVD++ TG K + E++ + +F +KD+G+L+YF GIE+
Sbjct: 828 HTLFIKRKNGKITALIVYVDDMIVTGDDPKEMNELQKYLSKEFEMKDLGQLKYFLGIEVA 887
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
G+ LS RKY LDLL ET + P
Sbjct: 888 RSKKGISLSQRKYVLDLLTETGMLDCSP 915
Score = 52.4 bits (124), Expect(4) = 7e-37
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = -2
Query: 596 KNTFLHGNLTRNVYIKQP--LRNVTHEVKQI*KHDKAIYKLKQSTKAWIDKFSYVVAQFG 423
KN FL+GNL VY+ P ++N EV ++ K K++Y LKQS +AW +FS + FG
Sbjct: 761 KNAFLNGNLEEEVYMDVPPGVKNYPSEVGKVCKLKKSLYGLKQSPRAWFGRFSKSMRAFG 820
Query: 422 LILYATKHTI 393
+ HT+
Sbjct: 821 YRQSNSDHTL 830
Score = 23.9 bits (50), Expect(4) = 7e-37
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TPI ++++L D +Y +LV I L TR DI+Y
Sbjct: 918 TPIEMNHRLAIYPDQIPTDKGRYQRLVGRLIYLSHTRPDIAY 959
>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
Length = 1382
Score = 76.6 bits (187), Expect(4) = 9e-37
Identities = 39/88 (44%), Positives = 56/88 (63%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H F ++ + I++L +YVD+I TG GI ++K+ +KF KD+G+L+YF GIE+
Sbjct: 1048 HSVFYKKSAAGIILLVVYVDDIVITGNDHAGISDLKTFMHSKFHTKDLGELKYFLGIEVS 1107
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
G+FLS RKY LDLL+ET KP
Sbjct: 1108 RSKKGMFLSQRKYVLDLLKETGKIEAKP 1135
Score = 65.1 bits (157), Expect(4) = 9e-37
Identities = 36/85 (42%), Positives = 52/85 (61%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
M +E AL TW+LV G ++V C+ V+ VK N DG++ K L+A+G+ Y V
Sbjct: 888 MLEEICALEDNHTWKLVDLPQGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTYGV 947
Query: 697 DYLNTFSPVAELNSFGVLFYLATNQ 623
DY +TFSPVA+LNS + +A +Q
Sbjct: 948 DYSDTFSPVAKLNSVRLFISIAASQ 972
Score = 53.1 bits (126), Expect(4) = 9e-37
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -2
Query: 596 KNTFLHGNLTRNVYIKQPLRNVTH-EVKQI*KHDKAIYKLKQSTKAWIDKFSYVVAQFGL 420
KN FLHG+L VY++QP V E ++ + KA+Y LKQS +AW KFS + FG+
Sbjct: 982 KNAFLHGDLEEEVYLEQPPGFVAQGEYGKVCRLKKALYGLKQSPRAWFGKFSKEIQAFGM 1041
Query: 419 ILYATKHTI 393
H++
Sbjct: 1042 NKSEKDHSV 1050
Score = 29.3 bits (64), Expect(4) = 9e-37
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TP+ + +L DDG Y+ +Y ++V L VTR DI+Y
Sbjct: 1138 TPMVPNVQLMPDDGDPFYNPERYRRVVGKLNYLTVTRPDIAY 1179
>emb|CAN63534.1| hypothetical protein VITISV_001206 [Vitis vinifera]
Length = 1189
Score = 76.6 bits (187), Expect(4) = 9e-37
Identities = 39/88 (44%), Positives = 56/88 (63%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H F ++ + I++L +YVD+I TG GI ++K+ +KF KD+G+L+YF GIE+
Sbjct: 903 HSVFYKKSAAGIILLVVYVDDIVITGNDHAGISDLKTFMHSKFHTKDLGELKYFLGIEVS 962
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
G+FLS RKY LDLL+ET KP
Sbjct: 963 RSKKGMFLSQRKYVLDLLKETGKIEAKP 990
Score = 65.1 bits (157), Expect(4) = 9e-37
Identities = 36/85 (42%), Positives = 52/85 (61%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
M +E AL TW+LV G ++V C+ V+ VK N DG++ K L+A+G+ Y V
Sbjct: 743 MLEEICALEDNHTWKLVDLPQGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTYGV 802
Query: 697 DYLNTFSPVAELNSFGVLFYLATNQ 623
DY +TFSPVA+LNS + +A +Q
Sbjct: 803 DYSDTFSPVAKLNSVRLFISIAASQ 827
Score = 53.1 bits (126), Expect(4) = 9e-37
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -2
Query: 596 KNTFLHGNLTRNVYIKQPLRNVTH-EVKQI*KHDKAIYKLKQSTKAWIDKFSYVVAQFGL 420
KN FLHG+L VY++QP V E ++ + KA+Y LKQS +AW KFS + FG+
Sbjct: 837 KNAFLHGDLEEEVYLEQPPGFVAQGEYGKVCRLKKALYGLKQSPRAWFGKFSKEIQAFGM 896
Query: 419 ILYATKHTI 393
H++
Sbjct: 897 NKSEKDHSV 905
Score = 29.3 bits (64), Expect(4) = 9e-37
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TP+ + +L DDG Y+ +Y ++V L VTR DI+Y
Sbjct: 993 TPMVPNVQLMPDDGDPFYNPERYRRVVGKLNYLTVTRPDIAY 1034
>emb|CAN71748.1| hypothetical protein VITISV_019194 [Vitis vinifera]
Length = 1306
Score = 76.6 bits (187), Expect(4) = 2e-36
Identities = 39/88 (44%), Positives = 56/88 (63%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H F ++ + I++L +YVD+I TG GI ++K+ +KF KD+G+L+YF GIE+
Sbjct: 1008 HSVFYKKSAAGIILLVVYVDDIVITGNDHAGISDLKTFMHSKFHTKDLGELKYFLGIEVS 1067
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
G+FLS RKY LDLL+ET KP
Sbjct: 1068 RSKKGMFLSQRKYVLDLLKETGKIEAKP 1095
Score = 64.3 bits (155), Expect(4) = 2e-36
Identities = 32/73 (43%), Positives = 47/73 (64%)
Frame = -3
Query: 841 TWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIVDYLNTFSPVAEL 662
TW+LV G ++V C+ V+ VK N DG++ K L+A+G+ Y VDY +TFSPVA+L
Sbjct: 860 TWKLVDLPQGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTYGVDYSDTFSPVAKL 919
Query: 661 NSFGVLFYLATNQ 623
NS + +A +Q
Sbjct: 920 NSVRLFISIAASQ 932
Score = 53.1 bits (126), Expect(4) = 2e-36
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -2
Query: 596 KNTFLHGNLTRNVYIKQPLRNVTH-EVKQI*KHDKAIYKLKQSTKAWIDKFSYVVAQFGL 420
KN FLHG+L VY++QP V E ++ + KA+Y LKQS +AW KFS + FG+
Sbjct: 942 KNAFLHGDLEEEVYLEQPPGFVAQGEYGKVCRLKKALYGLKQSPRAWFGKFSKEIQAFGM 1001
Query: 419 ILYATKHTI 393
H++
Sbjct: 1002 NKSEKDHSV 1010
Score = 29.3 bits (64), Expect(4) = 2e-36
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TP+ + +L DDG Y+ +Y ++V L VTR DI+Y
Sbjct: 1098 TPMVPNVQLMPDDGDPFYNPERYRRVVGKLNYLTVTRPDIAY 1139
>emb|CAN71132.1| hypothetical protein VITISV_007235 [Vitis vinifera]
Length = 1259
Score = 75.5 bits (184), Expect(4) = 3e-36
Identities = 39/88 (44%), Positives = 55/88 (62%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H F ++ I++L +YVD+I TG GI ++K+ +KF KD+G+L+YF GIE+
Sbjct: 981 HSVFYKKSAXGIILLVVYVDDIVITGNDHAGISBLKTFMHSKFHTKDLGELKYFLGIEVS 1040
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
G+FLS RKY LDLL+ET KP
Sbjct: 1041 RSKKGMFLSQRKYVLDLLKETGKIEAKP 1068
Score = 65.1 bits (157), Expect(4) = 3e-36
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = -3
Query: 871 DETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIVDY 692
+E AL TW+LV G ++V C+ V+ VK N DG++ K L+A G+ Y VDY
Sbjct: 823 EEIYALEDNHTWKLVDSPQGKKVVGCKWVFAVKVNPDGSVARLKARLVAXGYAQTYGVDY 882
Query: 691 LNTFSPVAELNSFGVLFYLATNQ 623
+TFSPVA+LNS + +A +Q
Sbjct: 883 SDTFSPVAKLNSVRLFISIAASQ 905
Score = 52.8 bits (125), Expect(4) = 3e-36
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -2
Query: 596 KNTFLHGNLTRNVYIKQPLRNVTH-EVKQI*KHDKAIYKLKQSTKAWIDKFSYVVAQFGL 420
KN FLHG L VY++QP V E ++ + KA+Y LKQS +AW KFS + FG+
Sbjct: 915 KNAFLHGXLEEEVYLEQPPGFVAQGEYXKVCRLKKALYGLKQSPRAWFGKFSKEIQAFGM 974
Query: 419 ILYATKHTI 393
H++
Sbjct: 975 NKSEKDHSV 983
Score = 29.3 bits (64), Expect(4) = 3e-36
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TP+ + +L DDG Y+ +Y ++V L VTR DI+Y
Sbjct: 1071 TPMVPNVQLMPDDGDPFYNPERYRRVVGKLNYLTVTRPDIAY 1112
>gb|PRQ60115.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1014
Score = 86.7 bits (213), Expect(4) = 3e-36
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
M+DE EAL TWELVPK G R V CR +Y +KY DGT+ YK L+AKG+ Y +
Sbjct: 520 MEDEMEALQKNDTWELVPKPAGKRAVGCRWIYTLKYAADGTLDRYKARLVAKGYTQTYGI 579
Query: 697 DYLNTFSPVAELNSFGVLFYLATN 626
DY TF+PVA++N+ VL LA N
Sbjct: 580 DYQETFAPVAKMNTVRVLLSLAAN 603
Score = 63.9 bits (154), Expect(4) = 3e-36
Identities = 33/88 (37%), Positives = 52/88 (59%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H F+ + L IYVD++ TG + ++++++H + F +KD+G L+YF GIE+
Sbjct: 680 HTLFLKHRKDKLTALIIYVDDMIVTGNDPEEVKKLEAHLSSVFEMKDLGGLKYFLGIEVA 739
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
G+ LS RKY +DLL ET L +P
Sbjct: 740 RSKEGIALSQRKYVVDLLIETGLLACRP 767
Score = 50.1 bits (118), Expect(4) = 3e-36
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = -2
Query: 644 ILFSY*SNLEHVLE--GNKNTFLHGNLTRNVYIKQPLR-NVTHEVKQI*KHDKAIYKLKQ 474
+L S +NL+ L+ KN FLHG+L VY+ P ++ + + K K++Y LKQ
Sbjct: 596 VLLSLAANLDWPLKQFDVKNAFLHGDLKEEVYMDLPPGYSLPSQAGMVCKLKKSLYGLKQ 655
Query: 473 STKAWIDKFSYVVAQFGLILYATKHTI 393
S +AW +FS + QFG + HT+
Sbjct: 656 SPRAWFGRFSQSMKQFGYKQSNSDHTL 682
Score = 21.9 bits (45), Expect(4) = 3e-36
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TP+ ++KL + +Y +LV I L TR DI+Y
Sbjct: 770 TPMEQNHKLAEYPDQVPTNKERYQRLVGKLIYLSHTRPDIAY 811
>gb|PRQ53465.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1350
Score = 86.3 bits (212), Expect(4) = 3e-36
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
M+DE EAL TWELVPK G R V CR +Y +KY DGT+ YK L+AKG+ Y +
Sbjct: 856 MEDEMEALQKNHTWELVPKPAGKRAVGCRWIYTLKYAADGTLDRYKARLVAKGYTQTYGI 915
Query: 697 DYLNTFSPVAELNSFGVLFYLATN 626
DY TF+PVA++N+ VL LA N
Sbjct: 916 DYQETFAPVAKMNTVRVLLSLAAN 939
Score = 63.9 bits (154), Expect(4) = 3e-36
Identities = 33/88 (37%), Positives = 52/88 (59%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H F+ + L IYVD++ TG + ++++++H + F +KD+G L+YF GIE+
Sbjct: 1016 HTLFLKHRKDKLTALIIYVDDMIVTGNDPEEVKKLEAHLSSVFEMKDLGGLKYFLGIEVA 1075
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
G+ LS RKY +DLL ET L +P
Sbjct: 1076 RSKEGIALSQRKYVVDLLIETGLLACRP 1103
Score = 50.1 bits (118), Expect(4) = 3e-36
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = -2
Query: 644 ILFSY*SNLEHVLE--GNKNTFLHGNLTRNVYIKQPLR-NVTHEVKQI*KHDKAIYKLKQ 474
+L S +NL+ L+ KN FLHG+L VY+ P ++ + + K K++Y LKQ
Sbjct: 932 VLLSLAANLDWPLKQFDVKNAFLHGDLKEEVYMDLPPGYSLPSQAGMVCKLKKSLYGLKQ 991
Query: 473 STKAWIDKFSYVVAQFGLILYATKHTI 393
S +AW +FS + QFG + HT+
Sbjct: 992 SPRAWFGRFSQSMKQFGYKQSNSDHTL 1018
Score = 21.9 bits (45), Expect(4) = 3e-36
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TP+ ++KL + +Y +LV I L TR DI+Y
Sbjct: 1106 TPMEQNHKLAEYPDQVPTNKERYQRLVGKLIYLSHTRPDIAY 1147
>gb|PRQ35290.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1060
Score = 81.6 bits (200), Expect(4) = 3e-36
Identities = 42/85 (49%), Positives = 55/85 (64%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
M++E EAL TWELVP G + V CR V+ VK N DGTI YK L+AKG+ Y +
Sbjct: 585 MNEEMEALQKNATWELVPMPVGKKTVGCRWVFTVKLNADGTINRYKARLVAKGYTQRYGI 644
Query: 697 DYLNTFSPVAELNSFGVLFYLATNQ 623
DY TF+PVA++N+ +L LA N+
Sbjct: 645 DYEETFAPVAKINTVRILISLAANK 669
Score = 65.9 bits (159), Expect(4) = 3e-36
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H FI + I L +YVD++ TG K + E++ + +F +KD+G+L+YF GIE+
Sbjct: 746 HTLFIKRKNGKITALIVYVDDMIVTGDDPKEMNELQKYMSKEFEMKDLGQLKYFLGIEVA 805
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
G+ LS RKY LDLL E + +P
Sbjct: 806 RSKKGILLSQRKYVLDLLAEKGMLDCRP 833
Score = 51.2 bits (121), Expect(4) = 3e-36
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = -2
Query: 596 KNTFLHGNLTRNVYIKQP--LRNVTHEVKQI*KHDKAIYKLKQSTKAWIDKFSYVVAQFG 423
KN FL+GNL VY+ P ++N +V ++ K K++Y LKQS +AW +FS + FG
Sbjct: 679 KNAFLNGNLEEEVYMDVPPGVKNYPSDVGKVCKLKKSLYGLKQSPRAWFGRFSKSMKAFG 738
Query: 422 LILYATKHTI 393
+ HT+
Sbjct: 739 YRQSNSDHTL 748
Score = 23.5 bits (49), Expect(4) = 3e-36
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TPI + ++L D +Y +LV I L TR DI+Y
Sbjct: 836 TPIEMSHRLAIYPDQVPTDKGRYQRLVGRLIYLSHTRPDIAY 877
>gb|PRQ52323.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1014
Score = 86.3 bits (212), Expect(4) = 3e-36
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
M+DE EAL TWELVPK G R V CR +Y +KY DGT+ YK L+AKG+ Y +
Sbjct: 520 MEDEMEALQKNHTWELVPKPAGKRAVGCRWIYTLKYAADGTLDRYKARLVAKGYTQTYGI 579
Query: 697 DYLNTFSPVAELNSFGVLFYLATN 626
DY TF+PVA++N+ VL LA N
Sbjct: 580 DYQETFAPVAKMNTVRVLLSLAAN 603
Score = 63.9 bits (154), Expect(4) = 3e-36
Identities = 33/88 (37%), Positives = 52/88 (59%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H F+ + L IYVD++ TG + ++++++H + F +KD+G L+YF GIE+
Sbjct: 680 HTLFLKHRKDKLTALIIYVDDMIVTGNDPEEVKKLEAHLSSVFEMKDLGGLKYFLGIEVA 739
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
G+ LS RKY +DLL ET L +P
Sbjct: 740 RSKEGIALSQRKYVVDLLIETGLLACRP 767
Score = 50.1 bits (118), Expect(4) = 3e-36
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = -2
Query: 644 ILFSY*SNLEHVLE--GNKNTFLHGNLTRNVYIKQPLR-NVTHEVKQI*KHDKAIYKLKQ 474
+L S +NL+ L+ KN FLHG+L VY+ P ++ + + K K++Y LKQ
Sbjct: 596 VLLSLAANLDWPLKQFDVKNAFLHGDLKEEVYMDLPPGYSLPSQAGMVCKLKKSLYGLKQ 655
Query: 473 STKAWIDKFSYVVAQFGLILYATKHTI 393
S +AW +FS + QFG + HT+
Sbjct: 656 SPRAWFGRFSQSMKQFGYKQSNSDHTL 682
Score = 21.9 bits (45), Expect(4) = 3e-36
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TP+ ++KL + +Y +LV I L TR DI+Y
Sbjct: 770 TPMEQNHKLAEYPDQVPTNKERYQRLVGKLIYLSHTRPDIAY 811
>gb|PRQ60568.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 697
Score = 86.7 bits (213), Expect(4) = 4e-36
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
M++E EAL TWELVPK G RIV CR +Y +KY DGT+ YK L+AKG+ Y +
Sbjct: 203 MEEEMEALQKSQTWELVPKPAGKRIVGCRWIYTLKYAADGTLDRYKARLVAKGYTQTYGI 262
Query: 697 DYLNTFSPVAELNSFGVLFYLATN 626
DY TF+PVA++N+ VL LA N
Sbjct: 263 DYQETFAPVAKMNTVRVLLSLAAN 286
Score = 63.5 bits (153), Expect(4) = 4e-36
Identities = 33/88 (37%), Positives = 52/88 (59%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H F+ + L IYVD++ TG + ++++++H + F +KD+G L+YF GIE+
Sbjct: 363 HTLFLKHRKDKLTALIIYVDDMIVTGNDPEEVKKLEAHLSSVFEMKDLGGLKYFLGIEVA 422
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
G+ LS RKY +DLL ET L +P
Sbjct: 423 RSKEGISLSQRKYVVDLLIETGLLACQP 450
Score = 50.1 bits (118), Expect(4) = 4e-36
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = -2
Query: 644 ILFSY*SNLEHVLE--GNKNTFLHGNLTRNVYIKQPLR-NVTHEVKQI*KHDKAIYKLKQ 474
+L S +NL+ L+ KN FLHG+L VY+ P ++ + + K K++Y LKQ
Sbjct: 279 VLLSLAANLDWPLKQFDVKNAFLHGDLKEEVYMDLPPGYSLPSQAGMVCKLKKSLYGLKQ 338
Query: 473 STKAWIDKFSYVVAQFGLILYATKHTI 393
S +AW +FS + QFG + HT+
Sbjct: 339 SPRAWFGRFSQSMKQFGYKQSNSDHTL 365
Score = 21.9 bits (45), Expect(4) = 4e-36
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TP+ ++KL + +Y +LV I L TR DI+Y
Sbjct: 453 TPMEQNHKLAEYPDQVPTNKERYQRLVGKLIYLSHTRPDIAY 494
>gb|PRQ42187.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 564
Score = 86.7 bits (213), Expect(4) = 4e-36
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
M++E EAL TWELVPK G RIV CR +Y +KY DGT+ YK L+AKG+ Y +
Sbjct: 203 MEEEMEALQKSQTWELVPKPAGKRIVGCRWIYTLKYAADGTLDRYKARLVAKGYTQTYGI 262
Query: 697 DYLNTFSPVAELNSFGVLFYLATN 626
DY TF+PVA++N+ VL LA N
Sbjct: 263 DYQETFAPVAKMNTVRVLLSLAAN 286
Score = 63.5 bits (153), Expect(4) = 4e-36
Identities = 33/88 (37%), Positives = 52/88 (59%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H F+ + L IYVD++ TG + ++++++H + F +KD+G L+YF GIE+
Sbjct: 363 HTLFLKHRKDKLTALIIYVDDMIVTGNDPEEVKKLEAHLSSVFEMKDLGGLKYFLGIEVA 422
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
G+ LS RKY +DLL ET L +P
Sbjct: 423 RSKEGISLSQRKYVVDLLIETGLLACQP 450
Score = 50.1 bits (118), Expect(4) = 4e-36
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = -2
Query: 644 ILFSY*SNLEHVLE--GNKNTFLHGNLTRNVYIKQPLR-NVTHEVKQI*KHDKAIYKLKQ 474
+L S +NL+ L+ KN FLHG+L VY+ P ++ + + K K++Y LKQ
Sbjct: 279 VLLSLAANLDWPLKQFDVKNAFLHGDLKEEVYMDLPPGYSLPSQAGMVCKLKKSLYGLKQ 338
Query: 473 STKAWIDKFSYVVAQFGLILYATKHTI 393
S +AW +FS + QFG + HT+
Sbjct: 339 SPRAWFGRFSQSMKQFGYKQSNSDHTL 365
Score = 21.9 bits (45), Expect(4) = 4e-36
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TP+ ++KL + +Y +LV I L TR DI+Y
Sbjct: 453 TPMEQNHKLAEYPDQVPTNKERYQRLVGKLIYLSHTRPDIAY 494
>gb|KOM38790.1| hypothetical protein LR48_Vigan03g217200 [Vigna angularis]
Length = 1119
Score = 74.7 bits (182), Expect(4) = 8e-36
Identities = 37/76 (48%), Positives = 49/76 (64%)
Frame = -1
Query: 360 VILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEIIDKV*GLFLSHRK 181
V L +YVD+I TG + I ++K H N F KD+G+L+YF GIE+ G+ +S RK
Sbjct: 797 VYLMVYVDDIVITGNDVARIAQLKDHLFNHFQTKDLGRLKYFLGIEVAQSKEGVIISQRK 856
Query: 180 YALDLLEETSLFGYKP 133
YALD+LEET L KP
Sbjct: 857 YALDILEETGLTDCKP 872
Score = 64.7 bits (156), Expect(4) = 8e-36
Identities = 35/82 (42%), Positives = 49/82 (59%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
M DE +AL GTW+LVP + V CR VY +K G I K L+AKG+ +Y +
Sbjct: 622 MIDEMQALDKSGTWDLVPLPPDKKPVGCRWVYAIKVGPTGAIDRLKARLVAKGYTQVYGL 681
Query: 697 DYLNTFSPVAELNSFGVLFYLA 632
DY +TFSPVA+++S + +A
Sbjct: 682 DYCDTFSPVAKISSVRLFLAMA 703
Score = 56.2 bits (134), Expect(4) = 8e-36
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = -2
Query: 596 KNTFLHGNLTRNVYIKQPLRN---VTHEVKQI*KHDKAIYKLKQSTKAWIDKFSYVVAQF 426
KN FLHG+L +Y++QP E K + K +++Y LKQS +AW KFS+VV QF
Sbjct: 716 KNAFLHGDLEEEIYMEQPPGFSCVAQGETKLVCKLRRSLYGLKQSPRAWFGKFSHVVQQF 775
Query: 425 GLILYATKHTI 393
GL H +
Sbjct: 776 GLKRCEADHLV 786
Score = 25.4 bits (54), Expect(4) = 8e-36
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 109 KLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
KL D G + +Y +LV I L +TR D+SY
Sbjct: 882 KLMKDHGEPFSNPERYRRLVGKLIYLTITRPDLSY 916
>gb|EXC35359.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 3263
Score = 77.4 bits (189), Expect(3) = 8e-36
Identities = 38/94 (40%), Positives = 58/94 (61%)
Frame = -3
Query: 904 MHNSQ*K*IMDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIA 725
+ NS+ K + DE +AL GTW + G R V C+ ++ +KY DG+++ +K L+A
Sbjct: 983 LQNSEWKKAVQDEIDALEKNGTWTITDLPGGKRPVGCKWIFTIKYKADGSVERFKARLVA 1042
Query: 724 KGFI*IYIVDYLNTFSPVAELNSFGVLFYLATNQ 623
+GF Y +DY TF+PVA+LN+ +L LA NQ
Sbjct: 1043 RGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQ 1076
Score = 75.9 bits (185), Expect(3) = 8e-36
Identities = 35/77 (45%), Positives = 52/77 (67%)
Frame = -1
Query: 363 IVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEIIDKV*GLFLSHR 184
I IL +YVD+I +G +K +QE+K + +F +KD+G L+YF G+E+ G+ +S R
Sbjct: 1164 IAILIVYVDDIILSGNDVKELQELKKYLSEEFEVKDLGNLKYFLGMEVARSSKGIVVSQR 1223
Query: 183 KYALDLLEETSLFGYKP 133
KY LDLL+ET + G KP
Sbjct: 1224 KYILDLLKETGMLGCKP 1240
Score = 47.8 bits (112), Expect(3) = 8e-36
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -2
Query: 596 KNTFLHGNLTRNVYIKQPLRNVTHEVK-QI*KHDKAIYKLKQSTKAWIDKFSYVVAQFGL 420
KN FL+G+L VY++ P K Q+ K K++Y LKQS +AW D+F+ V + G
Sbjct: 1086 KNAFLNGDLEEEVYMEIPPGFEGSMTKNQVCKLRKSLYGLKQSPRAWFDRFTKAVLKLGY 1145
Query: 419 ILYATKHTI 393
+ + HT+
Sbjct: 1146 VQGQSDHTL 1154
>gb|KOM52479.1| hypothetical protein LR48_Vigan09g113800 [Vigna angularis]
Length = 496
Score = 75.9 bits (185), Expect(4) = 8e-36
Identities = 38/76 (50%), Positives = 50/76 (65%)
Frame = -1
Query: 360 VILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEIIDKV*GLFLSHRK 181
V L +YVD+I TG I I ++K+H N F KD+G+L+YF GIE+ G+ +S RK
Sbjct: 174 VSLMVYVDDIVITGNDITRINQLKNHLFNHFQTKDLGRLKYFLGIEVAQSKEGVIISQRK 233
Query: 180 YALDLLEETSLFGYKP 133
YALD+LEET L KP
Sbjct: 234 YALDILEETGLTNCKP 249
Score = 62.0 bits (149), Expect(4) = 8e-36
Identities = 35/82 (42%), Positives = 47/82 (57%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
M DE +AL GTW+LVP + V CR +Y VK G I K L+AKG+ +Y
Sbjct: 1 MVDEMKALEHNGTWDLVPLPPDKKPVGCRWIYTVKVGPTGKIDRLKARLVAKGYTQVYGQ 60
Query: 697 DYLNTFSPVAELNSFGVLFYLA 632
DY +TFSPVA+ +S + +A
Sbjct: 61 DYCDTFSPVAKTSSVRIFLAMA 82
Score = 54.3 bits (129), Expect(4) = 8e-36
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 596 KNTFLHGNLTRNVYIKQPLRNVTH-EVKQI*KHDKAIYKLKQSTKAWIDKFSYVVAQFGL 420
KN FLHG+L +Y++QP V E + K +++Y LKQS +AW KFS VV +FGL
Sbjct: 95 KNAFLHGDLEEEIYMEQPPGFVAQGESGLVCKLRRSLYGLKQSPRAWFGKFSQVVQKFGL 154
Query: 419 ILYATKHTI 393
H++
Sbjct: 155 KRCEADHSV 163
Score = 28.9 bits (63), Expect(4) = 8e-36
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -3
Query: 127 PIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
P+ + KL D G D +Y +LV I L +TR D+SY
Sbjct: 253 PMDPNQKLMTDQGEPFSDPERYRRLVGKLIYLTITRPDLSY 293
>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
Length = 1402
Score = 72.0 bits (175), Expect(4) = 1e-35
Identities = 39/88 (44%), Positives = 51/88 (57%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H F Q+ I++L +YVD+I T GI +K + F KD+G+L+YF GIE+
Sbjct: 1090 HSVFYRQSAVGIILLVVYVDDIVITRSDYAGISSLKLFLHSMFHTKDLGQLKYFLGIEVS 1149
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
G+FLS RKY LDLLEET KP
Sbjct: 1150 RSKKGIFLSQRKYILDLLEETGKSAAKP 1177
Score = 64.3 bits (155), Expect(4) = 1e-35
Identities = 37/85 (43%), Positives = 49/85 (57%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
M DE AL TW LV G + V C+ V+ +K N DG++ K L+AKG+ Y V
Sbjct: 930 MLDEIHALDDNHTWNLVDLPKGKKAVGCKWVFTIKVNPDGSMARLKARLVAKGYAQTYGV 989
Query: 697 DYLNTFSPVAELNSFGVLFYLATNQ 623
DY +TFSPVA+L S + LA +Q
Sbjct: 990 DYSDTFSPVAKLTSVRLFISLAASQ 1014
Score = 53.5 bits (127), Expect(4) = 1e-35
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -2
Query: 596 KNTFLHGNLTRNVYIKQPLRNVTH-EVKQI*KHDKAIYKLKQSTKAWIDKFSYVVAQFGL 420
KN FLHG+L VY++QP V E ++ K +Y LKQS +AW KFS VV +FGL
Sbjct: 1024 KNAFLHGDLQEEVYMEQPPGFVAQGENGKVCHLKKPLYGLKQSPRAWFGKFSEVVQKFGL 1083
Query: 419 ILYATKHTI 393
H++
Sbjct: 1084 TKSNCDHSV 1092
Score = 30.8 bits (68), Expect(4) = 1e-35
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TP+ + +L NDDG D +Y +LV L VTR DIS+
Sbjct: 1180 TPMVPNTQLTNDDGDPFDDPERYRRLVGKLNYLTVTRPDISF 1221
>emb|CAN65144.1| hypothetical protein VITISV_026080 [Vitis vinifera]
Length = 1220
Score = 76.6 bits (187), Expect(4) = 1e-35
Identities = 39/88 (44%), Positives = 56/88 (63%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H F ++ + I++L +YVD+I TG GI ++K+ +KF KD+G+L+YF GIE+
Sbjct: 922 HSVFYKKSAAGIILLVVYVDDIVITGNDHAGISDLKTFMHSKFHTKDLGELKYFLGIEVS 981
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
G+FLS RKY LDLL+ET KP
Sbjct: 982 RSKKGMFLSQRKYVLDLLKETGKIEAKP 1009
Score = 61.6 bits (148), Expect(4) = 1e-35
Identities = 35/85 (41%), Positives = 50/85 (58%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
M +E AL TW LV G ++V C+ V+ VK DG++ K L+A+G+ Y V
Sbjct: 762 MLEEICALEDNHTWXLVDLPQGKKVVGCKWVFAVKVXPDGSVARLKARLVARGYAQTYGV 821
Query: 697 DYLNTFSPVAELNSFGVLFYLATNQ 623
DY +TFSPVA+LNS + +A +Q
Sbjct: 822 DYSDTFSPVAKLNSVRLFISIAASQ 846
Score = 53.1 bits (126), Expect(4) = 1e-35
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -2
Query: 596 KNTFLHGNLTRNVYIKQPLRNVTH-EVKQI*KHDKAIYKLKQSTKAWIDKFSYVVAQFGL 420
KN FLHG+L VY++QP V E ++ + KA+Y LKQS +AW KFS + FG+
Sbjct: 856 KNAFLHGDLEEEVYLEQPPGFVAQGEYGKVCRLKKALYGLKQSPRAWFGKFSKEIQAFGM 915
Query: 419 ILYATKHTI 393
H++
Sbjct: 916 NKSEKDHSV 924
Score = 29.3 bits (64), Expect(4) = 1e-35
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TP+ + +L DDG Y+ +Y ++V L VTR DI+Y
Sbjct: 1012 TPMVPNVQLMPDDGDPFYNPERYRRVVGKLNYLTVTRPDIAY 1053
>gb|KYP63559.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1378
Score = 69.7 bits (169), Expect(4) = 2e-35
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = -1
Query: 360 VILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEIIDKV*GLFLSHRK 181
V L +YVD+I TG I ++K H + F KD+G L+YF GIE+ G+ +S RK
Sbjct: 1056 VYLIVYVDDIVITGNDSVKISQLKRHLVSHFETKDLGYLKYFLGIEVAQSKEGIVISQRK 1115
Query: 180 YALDLLEETSLFGYKP 133
YALD+LEET + KP
Sbjct: 1116 YALDILEETGMINCKP 1131
Score = 67.8 bits (164), Expect(4) = 2e-35
Identities = 37/79 (46%), Positives = 49/79 (62%)
Frame = -3
Query: 868 ETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIVDYL 689
E +AL S GTWELVP G + V CR VY +K DG + K L+AKG+ IY +DY
Sbjct: 886 EMQALESSGTWELVPLPPGKKTVGCRWVYAIKVGPDGKLDRLKARLVAKGYTQIYGLDYG 945
Query: 688 NTFSPVAELNSFGVLFYLA 632
+TFSPVA++ S + +A
Sbjct: 946 DTFSPVAKVTSVRLFLAMA 964
Score = 55.5 bits (132), Expect(4) = 2e-35
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 596 KNTFLHGNLTRNVYIKQPLRNVTH-EVKQI*KHDKAIYKLKQSTKAWIDKFSYVVAQFGL 420
KN FLHG+L +Y++QP V E + K +++Y LKQS +AW KFS+VV FGL
Sbjct: 977 KNAFLHGDLEEEIYMEQPPGFVAQGECGLVCKLRRSLYGLKQSPRAWFGKFSHVVQSFGL 1036
Query: 419 ILYATKHTI 393
H++
Sbjct: 1037 NRSEADHSV 1045
Score = 26.9 bits (58), Expect(4) = 2e-35
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
+P+ + KL D G D +Y +LV I L +TR DIS+
Sbjct: 1134 SPMDPNKKLVADHGEPFSDPERYRRLVGKLIYLTITRPDISF 1175
>gb|PNX96430.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 1101
Score = 74.7 bits (182), Expect(4) = 2e-35
Identities = 39/85 (45%), Positives = 54/85 (63%)
Frame = -3
Query: 877 MDDETEALIS*GTWELVPKLYGVRIVACR*VYIVKYNLDGTIQWYKT*LIAKGFI*IYIV 698
+D+E AL TW+LV G + V C+ V+ +K+ DGTI+ YK L+AKG+ Y V
Sbjct: 714 IDEEMTALKKNDTWDLVQLPPGKKTVGCKWVFTIKHKPDGTIERYKARLVAKGYTQSYGV 773
Query: 697 DYLNTFSPVAELNSFGVLFYLATNQ 623
DY TF+PVA+LN+ +L LA NQ
Sbjct: 774 DYQETFAPVAKLNTVRILLSLAANQ 798
Score = 67.8 bits (164), Expect(4) = 2e-35
Identities = 36/88 (40%), Positives = 49/88 (55%)
Frame = -1
Query: 396 HFTFI*QNISIIVILAIYVDNIHFTGIGIKGIQEVKSHFENKFIIKDIGKLRYFNGIEII 217
H F+ + I L IYVD++ TG I ++ H ++F +K +G L+YF GIE+
Sbjct: 873 HTLFLKKGQGKITALIIYVDDMVVTGNDADEIYSLQQHLASQFEMKQLGNLKYFLGIEVA 932
Query: 216 DKV*GLFLSHRKYALDLLEETSLFGYKP 133
G+FL RKY LDLL E L G KP
Sbjct: 933 RSKHGIFLCQRKYILDLLSEVGLLGCKP 960
Score = 48.1 bits (113), Expect(4) = 2e-35
Identities = 23/68 (33%), Positives = 36/68 (52%)
Frame = -2
Query: 596 KNTFLHGNLTRNVYIKQPLRNVTHEVKQI*KHDKAIYKLKQSTKAWIDKFSYVVAQFGLI 417
KN FLHG++ +Y+ P ++ K KA+Y LKQS +AW +F+ + FG
Sbjct: 808 KNAFLHGDIIEEIYMDPPPGTKHTTGMEVCKLKKALYGLKQSPRAWFGRFTKCMKSFGYS 867
Query: 416 LYATKHTI 393
+ HT+
Sbjct: 868 TSNSDHTL 875
Score = 29.3 bits (64), Expect(4) = 2e-35
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 130 TPIALDYKLCNDDGSDNYDFTKYLQLVRNPICLRVTRLDISY 5
TPI ++KL S + D +Y +LV I L TR DI+Y
Sbjct: 963 TPIEQNHKLFQCSSSSSIDKERYQKLVGKLIYLSHTRPDITY 1004