BLASTX nr result

ID: Cheilocostus21_contig00058478 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00058478
         (1074 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]    45   5e-06

>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
          Length = 1505

 Score = 45.1 bits (105), Expect(2) = 5e-06
 Identities = 25/62 (40%), Positives = 33/62 (53%)
 Frame = +3

Query: 675  NTRDTVIHYKAKYVAKGIT*TYDTNYLYTFSSVAHXXXXXXXXXXXXNVD*CLYQLDTEN 854
            N+  ++  YKA+ VAKG T TY  +YL TF+ VA             N+D  L QLD +N
Sbjct: 1047 NSNGSLERYKARLVAKGFTQTYGIDYLETFAPVAKLNTVRVLLSIAANLDWPLQQLDVKN 1106

Query: 855  VF 860
             F
Sbjct: 1107 AF 1108



 Score = 35.0 bits (79), Expect(2) = 5e-06
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +1

Query: 904  HIGKMICELKKGIYGLK*SPIA*FHKIFQ 990
            H G  +C+LKK +YGLK SP A F +  Q
Sbjct: 1128 HFGSKVCKLKKSLYGLKQSPRAWFERFTQ 1156


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