BLASTX nr result
ID: Cheilocostus21_contig00058357
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00058357
(459 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus] >gi|... 77 2e-13
gb|AKA45798.1| polyprotein [Taro bacilliform CH virus] 74 3e-12
gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus] 69 1e-10
gb|AIK01820.1| ORF3 [Piper yellow mottle virus] 65 2e-09
gb|AIK01816.1| ORF3 [Piper yellow mottle virus] 64 7e-09
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] >gi|5403574... 64 7e-09
gb|AIK01824.1| ORF3 [Piper yellow mottle virus] 63 2e-08
gb|ATW01249.1| ORF3 protein [Dioscorea bacilliform RT virus] 62 2e-08
gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus] 62 2e-08
gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus] 62 2e-08
gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus] 62 2e-08
gb|APB42235.1| ORF3 [Dioscorea bacilliform virus] 61 6e-08
gb|AHG32725.1| ORF3, partial [Dioscorea rotundata] 60 2e-07
gb|ABI47986.1| ORF3 protein [Dioscorea bacilliform virus] 56 3e-06
ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus] >... 55 9e-06
>ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus]
gb|AKA45804.1| polyprotein [Taro bacilliform CH virus]
Length = 1803
Score = 77.0 bits (188), Expect = 2e-13
Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Frame = +1
Query: 1 RMNCSLCSTTICGMCSMYYFDKKVPVA*ENQIKYNPHELIQSQQDYILFCXXXXXXXXXX 180
RM+C C T C +C++YYF +KVP + N I+YNP L+ QQ YI +C
Sbjct: 957 RMHCPQCLITTCNLCALYYFGQKVPASRPNPIQYNPLSLMHEQQGYITWC---------- 1006
Query: 181 XXTAQVFKEENRELNQRVIQTTQEAQKFEQEAYNWKQKYHRLEEETM--DFDRLCLEKKD 354
+ + QE + +++ WKQKY +EE +FD L EK
Sbjct: 1007 --------------EAEITRLKQEVETSKKQVEYWKQKYLSTQEEVFEKEFDELYKEKG- 1051
Query: 355 LQKEINLLKGKEKETAYVLFEESTTQKVLSIE 450
KG + A +F + TQ++LSIE
Sbjct: 1052 --------KGVVIQEATNVFRQIETQRILSIE 1075
>gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]
Length = 1803
Score = 73.6 bits (179), Expect = 3e-12
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 2/152 (1%)
Frame = +1
Query: 1 RMNCSLCSTTICGMCSMYYFDKKVPVA*ENQIKYNPHELIQSQQDYILFCXXXXXXXXXX 180
RM+C C T C +C++YYF +KVP + + I+YNP L+ QQ YI +C
Sbjct: 957 RMHCPQCLITTCNLCALYYFGQKVPASRPSPIQYNPLSLMHEQQGYITWC---------- 1006
Query: 181 XXTAQVFKEENRELNQRVIQTTQEAQKFEQEAYNWKQKYHRLEEETM--DFDRLCLEKKD 354
+ + QE + +++ WKQKY +EE +FD L EK
Sbjct: 1007 --------------EAEITRLKQEVETSKKQTEYWKQKYLSTQEEVFEKEFDELYKEKG- 1051
Query: 355 LQKEINLLKGKEKETAYVLFEESTTQKVLSIE 450
KG + A + + TQK+LSIE
Sbjct: 1052 --------KGVVIQEATNVVRQIETQKILSIE 1075
>gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]
Length = 1946
Score = 68.9 bits (167), Expect = 1e-10
Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Frame = +1
Query: 1 RMNCSLCSTTICGMCSMYYFDKKVPVA*ENQIKYNPHELIQSQQDYILFCXXXXXXXXXX 180
R +CS C TT CGMC YF+ K+PV ++Y+P L++ QQ YI +
Sbjct: 1094 RAHCSKCQTTSCGMCGPNYFNIKIPVRRVEPVRYDPKPLLEQQQVYIKWADAEIERLKGE 1153
Query: 181 XXTAQ---VFKEENRELN-QRVIQTTQEAQKFEQEAYNWKQKYHRLEEETMDFDRLCLEK 348
Q + +N + N QR I+ + E EA + EE + DRL LE
Sbjct: 1154 LKAVQEKAALEAQNMQENVQREIEAQSKIHMQEIEAIKLEVDTEN-EELRFENDRLKLEV 1212
Query: 349 KDLQKEINLLKGKEK------ETAYVLFEESTTQKVLSIE 450
DL+K ++ +KGKE E E +K+ S E
Sbjct: 1213 HDLKKLLDAIKGKEPLEDEDGEGTSAFLREEEHEKIFSAE 1252
>gb|AIK01820.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 65.5 bits (158), Expect = 2e-09
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Frame = +1
Query: 1 RMNCSLCSTTICGMCSMYYFDKKVPVA*ENQIKYNPHELIQSQQDYILFCXXXXXXXXXX 180
R++C +C T CG+CS + FDK + V E YNP L++ QQ YI +C
Sbjct: 1024 RIHCPICKVTSCGLCSNFCFDKSIQVKKEYVAPYNPRNLLEEQQRYIEWCELEMKRLKES 1083
Query: 181 XXTAQVFKEENRELN------QRVIQTTQEAQKFEQEAYNWKQKYHRLEE-----ETMDF 327
+ EN L +R I QE QK + + ++Y+ EE E D
Sbjct: 1084 ISHDNELRMENDRLQLENQDLKRQIAKLQEKQKMKALMEDLGEEYYSEEEVNVLVEEWDN 1143
Query: 328 DRLCLEKKDLQKEIN 372
R+ E DL+ E+N
Sbjct: 1144 KRVTKELDDLEAELN 1158
>gb|AIK01816.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 63.9 bits (154), Expect = 7e-09
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Frame = +1
Query: 1 RMNCSLCSTTICGMCSMYYFDKKVPVA*ENQIKYNPHELIQSQQDYILFCXXXXXXXXXX 180
R++C +C T CG+CS + FDK + V E YNP L++ QQ YI +C
Sbjct: 1023 RIHCPICKVTSCGLCSTFCFDKSIQVKKEYVAPYNPRNLLEEQQRYIEWCELEMKRLKES 1082
Query: 181 XXTAQVFKEENRELN------QRVIQTTQEAQKFEQ------EAYNWKQKYHRLEEETMD 324
+ EN L +R I+ Q+ QK + E ++++++ + L E+ D
Sbjct: 1083 IIQNDELRMENDRLQLENRDLKRQIEKLQDKQKMKALMEDLGEEFDYEEEVNVLVED-WD 1141
Query: 325 FDRLCLEKKDLQKEIN 372
R+ E DL+ E+N
Sbjct: 1142 NKRVTKELDDLEAELN 1157
>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus]
gb|AGV08293.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 63.9 bits (154), Expect = 7e-09
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Frame = +1
Query: 1 RMNCSLCSTTICGMCSMYYFDKKVPVA*ENQIKYNPHELIQSQQDYILFCXXXXXXXXXX 180
R++C +C T CG+CS + FDK + V E YNP L++ QQ YI +C
Sbjct: 1023 RIHCPICKVTSCGLCSTFCFDKSIQVKKEYVAPYNPRNLLEEQQRYIEWCELEMKRLKES 1082
Query: 181 XXTAQVFKEENRELN------QRVIQTTQEAQKFEQ------EAYNWKQKYHRLEEETMD 324
+ EN L +R I+ Q+ QK + E ++++++ + L E+ D
Sbjct: 1083 IIQNDELRMENDRLQLENRDLKRQIEKLQDKQKMKALMEDLGEEFDYEEEVNVLVED-WD 1141
Query: 325 FDRLCLEKKDLQKEIN 372
R+ E DL+ E+N
Sbjct: 1142 NKRVTKELDDLEAELN 1157
>gb|AIK01824.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 62.8 bits (151), Expect = 2e-08
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Frame = +1
Query: 1 RMNCSLCSTTICGMCSMYYFDKKVPVA*ENQIKYNPHELIQSQQDYILFCXXXXXXXXXX 180
R++C +C T CG+CS + FDK + V E YNP L++ QQ YI +C
Sbjct: 1024 RIHCPICKVTSCGLCSKFCFDKSIQVKKEYVAPYNPRNLLEEQQKYIEWCELEMKRLRES 1083
Query: 181 XXTAQVFKEENRELN------QRVIQTTQEAQKFEQEAYNWKQKYHRLEE-----ETMDF 327
+ EN L +R I QE QK + + ++++ EE E D
Sbjct: 1084 INQDNELRMENDRLRLENQDLKRQIAKLQENQKMKALLEDLGEEFYMEEEANVLVEEWDN 1143
Query: 328 DRLCLEKKDLQKEIN 372
+++ E +L+ E+N
Sbjct: 1144 EKVTKELDNLEAELN 1158
>gb|ATW01249.1| ORF3 protein [Dioscorea bacilliform RT virus]
Length = 1904
Score = 62.4 bits (150), Expect = 2e-08
Identities = 38/128 (29%), Positives = 57/128 (44%)
Frame = +1
Query: 10 CSLCSTTICGMCSMYYFDKKVPVA*ENQIKYNPHELIQSQQDYILFCXXXXXXXXXXXXT 189
C CS CG CS +Y ++P E YNPH L+ QQ+YI FC
Sbjct: 1071 CMHCSIVTCGFCSQHYVQLEIPCQKEEVQIYNPHRLLYEQQEYIKFCEVEMEKLKNAAKA 1130
Query: 190 AQVFKEENRELNQRVIQTTQEAQKFEQEAYNWKQKYHRLEEETMDFDRLCLEKKDLQKEI 369
A+ E+ ++ I+ E ++ +E K + RLE E D R+ E + Q +
Sbjct: 1131 AEKIAED--KILAASIRNAVEIEELRKELATVKLEKDRLELENKDLKRILEESE--QVNV 1186
Query: 370 NLLKGKEK 393
+ G+EK
Sbjct: 1187 LICDGREK 1194
>gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus]
Length = 1919
Score = 62.4 bits (150), Expect = 2e-08
Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Frame = +1
Query: 10 CSLCSTTICGMCSMYYFDKKVPVA*EN-QIKYNPHELIQSQQDYILFCXXXXXXXXXXXX 186
CS CS CGMCS +Y +P E + YNP +L+ QQ YI C
Sbjct: 1061 CSKCSILTCGMCSEHYLGLNIPCQREEIRQVYNPRQLMMEQQSYIQSC----------EL 1110
Query: 187 TAQVFKEENRELNQRVIQTTQEAQKFEQEAYNWKQKYHRLEEETMDFDRLCLEKKDLQKE 366
Q KEE + + ++V + A K EA K+ +++E ++ DRL LE DL++
Sbjct: 1111 EIQRLKEEIQNV-KKVAEEQVVAAKI-NEAVAVKEMQEQIQELKLENDRLTLENHDLKE- 1167
Query: 367 INLLKGKEKETAYVLFEESTTQKVLS 444
LLK KE E VL E ++ ++
Sbjct: 1168 --LLKNKEPEQLEVLICEGKERQYIA 1191
>gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus]
Length = 1921
Score = 62.4 bits (150), Expect = 2e-08
Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Frame = +1
Query: 10 CSLCSTTICGMCSMYYFDKKVPVA*EN-QIKYNPHELIQSQQDYILFCXXXXXXXXXXXX 186
CS CS CGMCS +Y +P E + YNP +L+ QQ YI C
Sbjct: 1063 CSKCSILTCGMCSEHYLGLNIPCQREEIRQVYNPRQLMMEQQSYIQSC----------EL 1112
Query: 187 TAQVFKEENRELNQRVIQTTQEAQKFEQEAYNWKQKYHRLEEETMDFDRLCLEKKDLQKE 366
Q KEE + + ++V + A K EA K+ +++E ++ DRL LE DL++
Sbjct: 1113 EIQRLKEEIQNV-KKVAEEQVVAAKI-NEAVAVKEMQEQIQELKLENDRLTLENHDLKE- 1169
Query: 367 INLLKGKEKETAYVLFEESTTQKVLS 444
LLK KE E VL E ++ ++
Sbjct: 1170 --LLKNKEPEQLEVLICEGKERQYIA 1193
>gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus]
Length = 1921
Score = 62.4 bits (150), Expect = 2e-08
Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Frame = +1
Query: 10 CSLCSTTICGMCSMYYFDKKVPVA*EN-QIKYNPHELIQSQQDYILFCXXXXXXXXXXXX 186
CS CS CGMCS +Y +P E + YNP +L+ QQ YI C
Sbjct: 1063 CSKCSILTCGMCSEHYLGLNIPCQREEIRQVYNPRQLMMEQQSYIQSC----------EL 1112
Query: 187 TAQVFKEENRELNQRVIQTTQEAQKFEQEAYNWKQKYHRLEEETMDFDRLCLEKKDLQKE 366
Q KEE + + ++V + A K EA K+ +++E ++ DRL LE DL++
Sbjct: 1113 EIQRLKEEIQNV-KKVAEEQVVAAKI-NEAVAVKEMQEQIQELKLENDRLTLENHDLKE- 1169
Query: 367 INLLKGKEKETAYVLFEESTTQKVLS 444
LLK KE E VL E ++ ++
Sbjct: 1170 --LLKNKEPEQLEVLICEGKERQYIA 1193
>gb|APB42235.1| ORF3 [Dioscorea bacilliform virus]
Length = 1897
Score = 61.2 bits (147), Expect = 6e-08
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = +1
Query: 10 CSLCSTTICGMCSMYYFDKKVPVA*EN-QIKYNPHELIQSQQDYILFCXXXXXXXXXXXX 186
C C+ CGMCS +Y D ++P E + YNP +L+ QQ+YI C
Sbjct: 1056 CQHCNILTCGMCSKHYVDLELPCQQEEIRQVYNPQQLMMEQQNYIQSCEMEI-------- 1107
Query: 187 TAQVFKEENRELNQRVIQTTQEAQKFEQEAYNWKQKYHRLEEETMDFDRLCLEKKDLQKE 366
Q K+E ++V + A + EA + ++ +LEE ++ DRL LE +DL+KE
Sbjct: 1108 --QRLKDELAR-EKKVAEEMVVAARIS-EAVSQQESKKQLEEMKLENDRLTLENEDLKKE 1163
Query: 367 INLLK 381
I LK
Sbjct: 1164 IRSLK 1168
>gb|AHG32725.1| ORF3, partial [Dioscorea rotundata]
Length = 1257
Score = 60.1 bits (144), Expect = 2e-07
Identities = 37/129 (28%), Positives = 58/129 (44%)
Frame = +1
Query: 10 CSLCSTTICGMCSMYYFDKKVPVA*ENQIKYNPHELIQSQQDYILFCXXXXXXXXXXXXT 189
C CS CG CS +Y ++P E YNPH L+ QQ+YI FC
Sbjct: 423 CMHCSIVTCGFCSQHYVQLEIPCQKEEVQIYNPHRLLYEQQEYIKFCEVEIEKWKNSAKA 482
Query: 190 AQVFKEENRELNQRVIQTTQEAQKFEQEAYNWKQKYHRLEEETMDFDRLCLEKKDLQKEI 369
++ E+ ++ I+ E ++ +E K + RLE E D R+ E + Q +
Sbjct: 483 SEKVAED--KILAASIRHAVEVEELRKELAAVKLEKDRLELENRDLKRILEESE--QVNV 538
Query: 370 NLLKGKEKE 396
+ G+EK+
Sbjct: 539 LICDGREKK 547
>gb|ABI47986.1| ORF3 protein [Dioscorea bacilliform virus]
Length = 1295
Score = 56.2 bits (134), Expect = 3e-06
Identities = 36/137 (26%), Positives = 57/137 (41%)
Frame = +1
Query: 10 CSLCSTTICGMCSMYYFDKKVPVA*ENQIKYNPHELIQSQQDYILFCXXXXXXXXXXXXT 189
C C+ CG CS +Y D ++P E YNP L+Q QQ+YI C
Sbjct: 1057 CMHCNLVTCGFCSQHYLDLEIPCQREEVQVYNPQRLLQEQQNYIQVCEVEIEKLKESVKA 1116
Query: 190 AQVFKEENRELNQRVIQTTQEAQKFEQEAYNWKQKYHRLEEETMDFDRLCLEKKDLQKEI 369
A E+ ++ I+ E ++ ++ K RLE E D ++ E + Q +
Sbjct: 1117 ANKIAED--KIMAASIRHAVELEELRKQLQAIKLDKERLELENHDLKKILEESE--QVNV 1172
Query: 370 NLLKGKEKETAYVLFEE 420
+ G+EK +E
Sbjct: 1173 LICDGREKSERIASIKE 1189
>ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus]
gb|ABI47983.1| ORF3 protein [Dioscorea bacilliform SN virus]
Length = 1887
Score = 55.1 bits (131), Expect = 9e-06
Identities = 36/137 (26%), Positives = 57/137 (41%)
Frame = +1
Query: 10 CSLCSTTICGMCSMYYFDKKVPVA*ENQIKYNPHELIQSQQDYILFCXXXXXXXXXXXXT 189
C C+ CG CS +Y D ++P E YNP L+Q QQ+YI C
Sbjct: 1057 CMHCNLVTCGFCSQHYLDLEIPCQREEVQVYNPQRLLQEQQNYIQVCEVEIEKLKESVKA 1116
Query: 190 AQVFKEENRELNQRVIQTTQEAQKFEQEAYNWKQKYHRLEEETMDFDRLCLEKKDLQKEI 369
A E+ ++ I+ E ++ ++ K RLE E D ++ E + Q +
Sbjct: 1117 ANKIAED--KIMAASIRHAVELEELRKQLQAIKLDKERLELENPDLKKILEEFE--QVNV 1172
Query: 370 NLLKGKEKETAYVLFEE 420
+ G+EK +E
Sbjct: 1173 LICDGREKSERIASIKE 1189