BLASTX nr result
ID: Cheilocostus21_contig00058134
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00058134
(406 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1] 71 1e-11
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor... 67 3e-10
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 66 6e-10
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 66 6e-10
ref|NP_569153.1| unknown [Citrus yellow mosaic virus] >gi|164169... 66 6e-10
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration... 65 7e-10
gb|ACH86211.1| unknown [Citrus yellow mosaic virus] 66 9e-10
gb|AER00544.1| ORF III [Citrus yellow mosaic virus] 66 9e-10
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus] 66 9e-10
gb|AER00538.1| ORF III [Citrus yellow mosaic virus] 66 9e-10
gb|ABU93491.1| polyprotein, partial [Citrus yellow mosaic virus] 65 1e-09
gb|ANK58548.1| polyprotein [Fig badnavirus 1] 65 2e-09
gb|ANK58545.1| polyprotein [Fig badnavirus 1] 65 2e-09
gb|ANK58542.1| polyprotein [Fig badnavirus 1] 65 2e-09
gb|ANK58539.1| polyprotein [Fig badnavirus 1] 65 2e-09
gb|ANK58536.1| polyprotein [Fig badnavirus 1] 65 2e-09
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962... 65 2e-09
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus] 65 2e-09
gb|ASA40120.1| ORF3 [Dioscorea bacilliform virus] 65 2e-09
gb|ABU93490.1| polyprotein, partial [Citrus yellow mosaic virus] 63 6e-09
>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
Length = 1846
Score = 71.2 bits (173), Expect = 1e-11
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +1
Query: 205 HTWQVN--MPMTTDETCTCCRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPIAPATP 375
H W+ N + C C+ TM+RARIHC C TACNLCGPYYF KE+P+AP P
Sbjct: 897 HKWEHNGEIQQFVYLKCLGCQCPTMKRARIHCPKCKATACNLCGPYYFKKEVPVAPPPP 955
>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1830
Score = 67.0 bits (162), Expect(2) = 3e-10
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Frame = +1
Query: 202 SHTWQVNMPMTTDET--CTCCRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPI--APA 369
+H W N + + C+ CRR +++RARIHC C +TACNLCGPYY E+P+ AP+
Sbjct: 891 AHNWVHNGEILVQKAIKCSFCRRESLKRARIHCPLCLLTACNLCGPYYLKIEVPVDPAPS 950
Query: 370 TP 375
TP
Sbjct: 951 TP 952
Score = 25.0 bits (53), Expect(2) = 3e-10
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 156 LYMLLSPVNGGYRPQI 203
+ ++L V+GGYRPQI
Sbjct: 866 IVLMLGEVDGGYRPQI 881
>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
Length = 1967
Score = 66.2 bits (160), Expect = 6e-10
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +1
Query: 205 HTWQVNMPMTTDETCTC--CRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPIAPATPA 378
H W+ N P+ C C+R T QRAR+HC C +T+C +CGP YFNK+I + P A
Sbjct: 1013 HEWEENQPIDDSAYVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKKITVQPIPQA 1072
Query: 379 QF 384
F
Sbjct: 1073 PF 1074
>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
Length = 1968
Score = 66.2 bits (160), Expect = 6e-10
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +1
Query: 205 HTWQVNMPMTTDETCTC--CRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPIAPATPA 378
H W+ N P+ C C+R T QRAR+HC C +T+C +CGP YFNK+I + P A
Sbjct: 1014 HEWEENQPINDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKKITVQPIPQA 1073
Query: 379 QF 384
F
Sbjct: 1074 PF 1075
>ref|NP_569153.1| unknown [Citrus yellow mosaic virus]
gb|AAL18495.1|AF347695_3 unknown [Citrus yellow mosaic virus]
Length = 1983
Score = 66.2 bits (160), Expect = 6e-10
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +1
Query: 205 HTWQVNMPMTTDETCTC--CRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPIAPATPA 378
H W+ N P+ C C+R T QRAR+HC C +T+C +CGP YFNK+I + P A
Sbjct: 1029 HEWEENQPINDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKKITVQPMPQA 1088
Query: 379 QF 384
F
Sbjct: 1089 PF 1090
>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1789
Score = 65.1 bits (157), Expect(2) = 7e-10
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Frame = +1
Query: 202 SHTWQVNMPMTTDET--CTCCRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPI--APA 369
+H W N + + C+ C+R +++RARIHC C +TACNLCGPYY E+P+ AP+
Sbjct: 927 AHNWVHNGEILVPKAIKCSFCKRDSLKRARIHCPLCLLTACNLCGPYYLKIEVPVDPAPS 986
Query: 370 TP 375
TP
Sbjct: 987 TP 988
Score = 25.8 bits (55), Expect(2) = 7e-10
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 156 LYMLLSPVNGGYRPQI 203
L ++L V+GGYRPQI
Sbjct: 902 LVLMLGEVDGGYRPQI 917
>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
Length = 1490
Score = 65.9 bits (159), Expect = 9e-10
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +1
Query: 205 HTWQVNMPMTTDETCTC--CRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPIAPATPA 378
H W+ N P+ C C+R T QRAR+HC C +T+C +CGP YFNK+I + P A
Sbjct: 537 HEWEENQPIDDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKKITVQPMPQA 596
Query: 379 QF 384
F
Sbjct: 597 PF 598
>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
Length = 1976
Score = 65.9 bits (159), Expect = 9e-10
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +1
Query: 205 HTWQVNMPMTTDETCTC--CRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPIAPATPA 378
H W+ N P+ C C+R T QRAR+HC C +T+C +CGP YFNK+I + P A
Sbjct: 1021 HEWEENQPIDDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKKITVQPIPQA 1080
Query: 379 QF 384
F
Sbjct: 1081 PF 1082
>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
Length = 1979
Score = 65.9 bits (159), Expect = 9e-10
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +1
Query: 205 HTWQVNMPMTTDETCTC--CRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPIAPATPA 378
H W+ N P+ C C+R T QRAR+HC C +T+C +CGP YFNK+I + P A
Sbjct: 1023 HEWEENQPIDDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKKITVQPIPQA 1082
Query: 379 QF 384
F
Sbjct: 1083 PF 1084
>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
Length = 1982
Score = 65.9 bits (159), Expect = 9e-10
Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 205 HTWQVNMPMTTDETCTC--CRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPIAPATPA 378
H W+ N P+ C C+R T QRAR+HC C +T+C +CGP YFNK I + P A
Sbjct: 1028 HEWEENQPINDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKRITVQPMPQA 1087
Query: 379 QF 384
F
Sbjct: 1088 PF 1089
>gb|ABU93491.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 284
Score = 64.7 bits (156), Expect = 1e-09
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +1
Query: 205 HTWQVNMPMTTDETCTC--CRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPIAPATPA 378
H W+ N P+ C C+R T QRAR+HC C +T+C +CGP YFN++I + P A
Sbjct: 101 HEWEENQPIDDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNRKITVQPIPQA 160
Query: 379 QF 384
F
Sbjct: 161 PF 162
>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 65.1 bits (157), Expect(2) = 2e-09
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Frame = +1
Query: 205 HTWQVNMPMTTDET--CTCCRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPI--APAT 372
H W N + C+ CRR +++RARIHC C +TACNLCGPYY E+P+ AP+T
Sbjct: 913 HNWIHNGDIFVQRAVHCSFCRRESIKRARIHCPLCLLTACNLCGPYYLKIEVPVEPAPST 972
Query: 373 P 375
P
Sbjct: 973 P 973
Score = 24.6 bits (52), Expect(2) = 2e-09
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 156 LYMLLSPVNGGYRPQI 203
+ ++L ++GGYRPQI
Sbjct: 887 IVLMLGEIDGGYRPQI 902
>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 65.1 bits (157), Expect(2) = 2e-09
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Frame = +1
Query: 205 HTWQVNMPMTTDET--CTCCRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPI--APAT 372
H W N + C+ CRR +++RARIHC C +TACNLCGPYY E+P+ AP+T
Sbjct: 913 HNWIHNGDIFVQRAVHCSFCRRESIKRARIHCPLCLLTACNLCGPYYLKIEVPVEPAPST 972
Query: 373 P 375
P
Sbjct: 973 P 973
Score = 24.6 bits (52), Expect(2) = 2e-09
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 156 LYMLLSPVNGGYRPQI 203
+ ++L ++GGYRPQI
Sbjct: 887 IVLMLGEIDGGYRPQI 902
>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 65.1 bits (157), Expect(2) = 2e-09
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Frame = +1
Query: 205 HTWQVNMPMTTDET--CTCCRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPI--APAT 372
H W N + C+ CRR +++RARIHC C +TACNLCGPYY E+P+ AP+T
Sbjct: 913 HNWIHNGDIFVQRAVHCSFCRRESIKRARIHCPLCLLTACNLCGPYYLKIEVPVEPAPST 972
Query: 373 P 375
P
Sbjct: 973 P 973
Score = 24.6 bits (52), Expect(2) = 2e-09
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 156 LYMLLSPVNGGYRPQI 203
+ ++L ++GGYRPQI
Sbjct: 887 IVLMLGEIDGGYRPQI 902
>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 65.1 bits (157), Expect(2) = 2e-09
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Frame = +1
Query: 205 HTWQVNMPMTTDET--CTCCRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPI--APAT 372
H W N + C+ CRR +++RARIHC C +TACNLCGPYY E+P+ AP+T
Sbjct: 913 HNWIHNGDIFVQRAVHCSFCRRESIKRARIHCPLCLLTACNLCGPYYLKIEVPVEPAPST 972
Query: 373 P 375
P
Sbjct: 973 P 973
Score = 24.6 bits (52), Expect(2) = 2e-09
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 156 LYMLLSPVNGGYRPQI 203
+ ++L ++GGYRPQI
Sbjct: 887 IVLMLGEIDGGYRPQI 902
>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 65.1 bits (157), Expect(2) = 2e-09
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Frame = +1
Query: 205 HTWQVNMPMTTDET--CTCCRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPI--APAT 372
H W N + C+ CRR +++RARIHC C +TACNLCGPYY E+P+ AP+T
Sbjct: 913 HNWIHNGDIFVQRAVHCSFCRRESIKRARIHCPLCLLTACNLCGPYYLKIEVPVEPAPST 972
Query: 373 P 375
P
Sbjct: 973 P 973
Score = 24.6 bits (52), Expect(2) = 2e-09
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 156 LYMLLSPVNGGYRPQI 203
+ ++L ++GGYRPQI
Sbjct: 887 IVLMLGEIDGGYRPQI 902
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
gb|AEF56561.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 65.1 bits (157), Expect(2) = 2e-09
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Frame = +1
Query: 205 HTWQVNMPMTTDET--CTCCRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPI--APAT 372
H W N + C+ CRR +++RARIHC C +TACNLCGPYY E+P+ AP+T
Sbjct: 913 HNWIHNGDIFVQRAVHCSFCRRESIKRARIHCPLCLLTACNLCGPYYLKIEVPVEPAPST 972
Query: 373 P 375
P
Sbjct: 973 P 973
Score = 24.6 bits (52), Expect(2) = 2e-09
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 156 LYMLLSPVNGGYRPQI 203
+ ++L ++GGYRPQI
Sbjct: 887 IVLMLGEIDGGYRPQI 902
>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
Length = 1976
Score = 64.7 bits (156), Expect = 2e-09
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +1
Query: 205 HTWQVNMPMTTDETCTC--CRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPIAPATPA 378
H W+ N P+ C C+R T QRAR+HC C +T+C +CGP YFN++I + P A
Sbjct: 1021 HEWEENQPIDDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNRKITVQPIPQA 1080
Query: 379 QF 384
F
Sbjct: 1081 PF 1082
>gb|ASA40120.1| ORF3 [Dioscorea bacilliform virus]
Length = 2005
Score = 64.7 bits (156), Expect = 2e-09
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +1
Query: 205 HTWQVNMPMTTD-ETCTCCRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPIAPATPAQ 381
H+W+++ PM C CC+R T + R +C+ C C +CGP YFN +P+ ATPA
Sbjct: 1123 HSWELHPPMLGQVPRCLCCKRDTQENWRAYCSRCQTVTCGMCGPNYFNLTVPVKKATPAF 1182
Query: 382 F 384
F
Sbjct: 1183 F 1183
>gb|ABU93490.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 284
Score = 62.8 bits (151), Expect = 6e-09
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 205 HTWQVNMPMTTDETCTC--CRRLTMQRARIHCTNCSVTACNLCGPYYFNKEIPIAPATPA 378
H W+ N P+ C C+R T QRAR+HC C +T+C +CGP YFNK+I + A
Sbjct: 101 HEWEENQPIDDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKKITVQQIPQA 160
Query: 379 QF 384
F
Sbjct: 161 PF 162