BLASTX nr result
ID: Cheilocostus21_contig00057461
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00057461
(3154 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP63559.1| Retrovirus-related Pol polyprotein from transposo... 61 4e-22
emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [M... 56 7e-20
gb|KYP44825.1| Retrovirus-related Pol polyprotein from transposo... 63 1e-19
emb|CAN80547.1| hypothetical protein VITISV_010898 [Vitis vinifera] 63 2e-19
emb|CAN61207.1| hypothetical protein VITISV_015446 [Vitis vinifera] 62 1e-18
emb|CAN75922.1| hypothetical protein VITISV_030752 [Vitis vinifera] 62 4e-18
gb|KYP58900.1| Retrovirus-related Pol polyprotein from transposo... 63 1e-17
gb|KYP60096.1| Retrovirus-related Pol polyprotein from transposo... 63 3e-17
emb|CAN80753.1| hypothetical protein VITISV_003323 [Vitis vinifera] 62 3e-17
emb|CAN75362.1| hypothetical protein VITISV_033265 [Vitis vinifera] 62 6e-17
emb|CAN71246.1| hypothetical protein VITISV_011986 [Vitis vinifera] 61 6e-17
emb|CAN72440.1| hypothetical protein VITISV_039162 [Vitis vinifera] 62 7e-17
gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposo... 58 7e-17
emb|CAN63730.1| hypothetical protein VITISV_030286 [Vitis vinifera] 62 2e-16
emb|CAN73101.1| hypothetical protein VITISV_042890 [Vitis vinifera] 61 3e-16
emb|CAN72018.1| hypothetical protein VITISV_001841 [Vitis vinifera] 61 3e-16
gb|KYP55651.1| Retrovirus-related Pol polyprotein from transposo... 63 4e-16
emb|CAN62266.1| hypothetical protein VITISV_025647 [Vitis vinifera] 61 4e-16
emb|CAN72663.1| hypothetical protein VITISV_031849 [Vitis vinifera] 61 4e-16
emb|CAN75900.1| hypothetical protein VITISV_033582 [Vitis vinifera] 62 6e-16
>gb|KYP63559.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1378
Score = 61.2 bits (147), Expect(4) = 4e-22
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 10/174 (5%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLSSSNHV 2249
G L+YFL EV + I +SQ KYA D ++ + C +D+P + V
Sbjct: 1092 GYLKYFLGIEVAQSKEGIVISQRKYALDILEETGMIN--------CKPIDSPMDPNKKLV 1143
Query: 2250 --------DPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
DP Y Y T+ RP+IS+ +G+VSQFM P W + IL Y
Sbjct: 1144 ADHGEPFSDPERYRRLVGKL-IYLTITRPDISFAVGVVSQFMQAPYIDHWNAVIHILRYI 1202
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
K +P +D GY + I G +++WKSKK
Sbjct: 1203 KKNPGQGLLYEDKGSTQISGYCDADWAGSPIDRRSTTGYCVFIGGNIISWKSKK 1256
Score = 44.3 bits (103), Expect(4) = 4e-22
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Frame = +1
Query: 1669 FFPVGGPTLLRVILVVN*--D*QLHQLNVKNTFLYGNLSKEVYIEKLLGYVA-------* 1821
F PV T +R+ L + LHQL++KN FL+G+L +E+Y+E+ G+VA
Sbjct: 948 FSPVAKVTSVRLFLAMAAIRHWPLHQLDIKNAFLHGDLEEEIYMEQPPGFVAQGECGLVC 1007
Query: 1822 R*RYAKAQIYL*P*AKSLSLV*KVFSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDE 2001
+ R + + P A V + L R S C + K VYL+ YVD+
Sbjct: 1008 KLRRSLYGLKQSPRA-WFGKFSHVVQSFGLNRSE--ADHSVFYCHTSSGKCVYLIVYVDD 1064
Query: 2002 NLLIDTDALN----QAPFYAHFVMKDLG 2073
++ D++ + +HF KDLG
Sbjct: 1065 IVITGNDSVKISQLKRHLVSHFETKDLG 1092
Score = 38.5 bits (88), Expect(4) = 4e-22
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSF-TISLLYTLLEIECFIKI------- 2718
QN+ Q S +A+Y+ M TCE+IW+ L++ F + + + + + I
Sbjct: 1257 QNVVAQSSAEAEYRAMATATCELIWIKQLLQELKFCDVKQMKLYCDNQAALHIASNPVFH 1316
Query: 2719 -KTKHI---LSFYSGCVLSTQISNSFRSLQ------VRRSSNMKNTSTMWAKLGMFDIY 2865
+TKHI F +LS +I F S + +S + +KLG +D+Y
Sbjct: 1317 ERTKHIEIDCHFVRQKLLSKEIGTEFTSSNDQLADILTKSLRGPRIKFICSKLGAYDLY 1375
Score = 32.0 bits (71), Expect(4) = 4e-22
Identities = 19/64 (29%), Positives = 25/64 (39%)
Frame = +3
Query: 1389 SFHAFITFFFIYTIPKACNKAVLVS*WN*RMDE*SGTFHYVGEWTFVSSLPSANHFTCRW 1568
S+ +F++ TIPK N A+ W M G W V P CRW
Sbjct: 853 SYFSFVSSLSSITIPKNINDALAHPGWRQAMVVEMQALESSGTWELVPLPPGKKTVGCRW 912
Query: 1569 VHNI 1580
V+ I
Sbjct: 913 VYAI 916
>emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [Malus domestica]
Length = 1390
Score = 55.8 bits (133), Expect(5) = 7e-20
Identities = 51/179 (28%), Positives = 69/179 (38%), Gaps = 10/179 (5%)
Frame = +3
Query: 2061 EGFGSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLS-- 2234
+ G L+YFL EV K I+LSQ KY D +K L C +DTP +
Sbjct: 1101 KSLGDLKYFLGVEVARSLKGIFLSQRKYVLDLLKETGMLG--------CKPVDTPIVEKH 1152
Query: 2235 ------SSNHVDPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCIL 2396
+ +D Y Y RP+I+Y + +VSQFMH P + IL
Sbjct: 1153 HLCLDPNQESIDKGRYQRLVGRL-IYLAHTRPDIAYAVSVVSQFMHSPSVDHMAAVMRIL 1211
Query: 2397 HYRKASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKKAK 2567
Y K++P + D GY + LVTW+SKK K
Sbjct: 1212 AYLKSAPGKGVLYQKHGHLNVEGFIDADWAGNVSDRRSTSGYFTFVGENLVTWRSKKQK 1270
Score = 40.0 bits (92), Expect(5) = 7e-20
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +1
Query: 1669 FFPVGGPTLLRVI--LVVN*D*QLHQLNVKNTFLYGNLSKEVYIEKLLGY 1812
F PV +RV+ L N D L Q +VKN FL+GNL +EVY++ GY
Sbjct: 962 FSPVAKMNTVRVLISLAANMDWPLKQFDVKNAFLHGNLEEEVYMDFPPGY 1011
Score = 35.4 bits (80), Expect(5) = 7e-20
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 2584 SCKAKYKGMTHNTCEVIWLHNLIKIFSF 2667
S +A+Y+GM H CE++WL L++ F
Sbjct: 1276 SAEAEYRGMAHGICEILWLRKLLEGLGF 1303
Score = 32.0 bits (71), Expect(5) = 7e-20
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 1844 KSIYSLKQSL*A*FEKFSHITFFVGIHCSKANHFVFV 1954
KS+Y LKQS A F++F+ + +G + S ++H +FV
Sbjct: 1024 KSLYGLKQSPRAWFDRFTQVMKRIGYYQSHSDHTLFV 1060
Score = 24.3 bits (51), Expect(5) = 7e-20
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +3
Query: 1428 IPKACNKAVLVS*WN*RMDE*SGTFHYVGEWTFVSSLPSANHFT-CRWVHNINYHMECII 1604
+P +A+ W MDE W V+SLP CRWV + Y + I
Sbjct: 880 VPTRVEEALKDPKWANAMDEEMLALQKNNTWE-VTSLPEGKKTVGCRWVFTVKYQADGSI 938
Query: 1605 NIARPYLLVR 1634
+ + L+ +
Sbjct: 939 DRYKARLVAK 948
>gb|KYP44825.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1371
Score = 63.2 bits (152), Expect(4) = 1e-19
Identities = 53/174 (30%), Positives = 72/174 (41%), Gaps = 10/174 (5%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTP-----KLS 2234
G L+YFL EV + I +SQ KYA D +K L C +D+P KL
Sbjct: 1085 GHLRYFLGIEVAQSKEGIVISQRKYAIDILKETGMLD--------CKPIDSPMDPNQKLM 1136
Query: 2235 SSN---HVDPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
+ DP Y Y T+ RP++S+ +GIVSQFM P W + IL Y
Sbjct: 1137 ADQGELFTDPERYRRLVGKL-IYLTITRPDLSFAVGIVSQFMQAPHIDHWNAVLRILRYI 1195
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
K +P +D GY + + G L++WKSKK
Sbjct: 1196 KKAPGQGLLYEDKGDSQISGYCDADWAGCPIDRRSTTGYCVFLGGNLISWKSKK 1249
Score = 42.0 bits (97), Expect(4) = 1e-19
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA-------*R*RYAKAQIYL*P*AKSLSLV*K 1890
LHQL++KN FL+G L +E+Y+E+ G+VA R R + + P A
Sbjct: 964 LHQLDIKNAFLHGELEEEIYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRA-WFGKFSH 1022
Query: 1891 VFSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDENLLIDTDALN----QAPFYAHFV 2058
V + L R S C + + VYL+ YVD+ ++ DA + ++ F
Sbjct: 1023 VVQNFGLKRSE--ADHSVFYCHTSPGRCVYLIVYVDDIVITGNDATTISQLKKHLFSQFQ 1080
Query: 2059 MKDLG 2073
KDLG
Sbjct: 1081 TKDLG 1085
Score = 32.3 bits (72), Expect(4) = 1e-19
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSF 2667
QN+ + S +AKY+ M TCE++W+ L++ F
Sbjct: 1250 QNVVARSSVEAKYRAMALITCELMWIKQLLQELKF 1284
Score = 30.0 bits (66), Expect(4) = 1e-19
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Frame = +3
Query: 1386 LSFH-------AFITFFFIYTIPKACNKAVLVS*WN*RMDE*SGTFHYVGEWTFVSSLPS 1544
LS+H +FI+ TIPK ++A+ W M + G W V P
Sbjct: 838 LSYHRLSPLYCSFISSISPLTIPKNVHEALDHPGWRQAMIAEMQALEHSGTWELVPLPPG 897
Query: 1545 ANHFTCRWVHNINYHMECIINIARPYLLVRFHLDI 1649
CRWV+ I + ++ + L+ + + I
Sbjct: 898 KQPVGCRWVYAIKVGPDGTVDRLKARLVAKGYTQI 932
>emb|CAN80547.1| hypothetical protein VITISV_010898 [Vitis vinifera]
Length = 1181
Score = 63.2 bits (152), Expect(4) = 2e-19
Identities = 50/172 (29%), Positives = 71/172 (41%), Gaps = 8/172 (4%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLSSSNHV 2249
G L+YFL E+ + LSQ KYA D ++ L C +DTP + V
Sbjct: 920 GKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLD--------CKPVDTPMDPNVKLV 971
Query: 2250 --------DPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
DP Y + Y T+ RP+IS+ + +VSQF+ P W+V + IL Y
Sbjct: 972 PGQGEPLGDPGRYRRLVGKLN-YLTITRPDISFPVSVVSQFLQSPCDSHWDVVIRILRYI 1030
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVDLFEGYALDISGRLVTWKSKK 2561
K++P GY + I G L++WKSKK
Sbjct: 1031 KSTPGQGVLYENRDRRST----------------SGYCVFIGGNLISWKSKK 1066
Score = 40.8 bits (94), Expect(4) = 2e-19
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA-------*R*RYAKAQIYL*P*AKSLSLV*K 1890
L+QL++KN FL+G+L++EVY+E+ G+VA R R + + P A S
Sbjct: 799 LYQLDIKNVFLHGDLAEEVYMEQPPGFVAPGESGLVCRLRRSLYGLKQSPRA-WFSRFSS 857
Query: 1891 VFSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDENLLI--DTDALNQAP--FYAHFV 2058
V + + R + S N+ + +YLV YVD+ ++ D D + + + HF
Sbjct: 858 VVQEFGMLRST--ADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQ 915
Query: 2059 MKDLG 2073
KDLG
Sbjct: 916 TKDLG 920
Score = 32.0 bits (71), Expect(4) = 2e-19
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSF 2667
Q++ + S +A+Y+ M TCE+IWL +L++ F
Sbjct: 1067 QDVVARSSAEAEYRAMALATCELIWLRHLLQELRF 1101
Score = 30.8 bits (68), Expect(4) = 2e-19
Identities = 17/86 (19%), Positives = 37/86 (43%)
Frame = +3
Query: 1392 FHAFITFFFIYTIPKACNKAVLVS*WN*RMDE*SGTFHYVGEWTFVSSLPSANHFTCRWV 1571
+ AF++ ++PK+ ++A+ W M + H G W V + CRWV
Sbjct: 682 YSAFVSAISSVSLPKSTHEALSHPGWRQAMVDEMAALHSNGTWDLVVLPSGKSTVGCRWV 741
Query: 1572 HNINYHMECIINIARPYLLVRFHLDI 1649
+ + E ++ + L+ + + +
Sbjct: 742 YAVKVGPEGQVDRLKARLVAKGYTQV 767
>emb|CAN61207.1| hypothetical protein VITISV_015446 [Vitis vinifera]
Length = 900
Score = 61.6 bits (148), Expect(4) = 1e-18
Identities = 50/177 (28%), Positives = 72/177 (40%), Gaps = 10/177 (5%)
Frame = +3
Query: 2061 EGFGSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLSSS 2240
+ G L+YFL E+ + LSQ KYA D ++ L C +DTP +
Sbjct: 611 DDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLD--------CKPVDTPMDPNV 662
Query: 2241 NHV--------DPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCIL 2396
V DP Y + Y T+ RP+IS+ + +VSQF+ P W+ + IL
Sbjct: 663 KLVPGQGEPLGDPGRYRRLVGKLN-YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRIL 721
Query: 2397 HYRKASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
Y K++P D GY + I G L++WKSKK
Sbjct: 722 RYIKSTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKK 778
Score = 38.9 bits (89), Expect(4) = 1e-18
Identities = 16/29 (55%), Positives = 26/29 (89%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA 1818
L+QL++KN FL+G+L++EVY+E+ G+VA
Sbjct: 509 LYQLDIKNAFLHGDLAEEVYMEQPPGFVA 537
Score = 34.3 bits (77), Expect(4) = 1e-18
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSF-TISLLYTLLEIECFIKI------- 2718
Q++ + S +A+Y+ M TCE+IWL +L++ F + + + + + I
Sbjct: 779 QDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASNPVFH 838
Query: 2719 -KTKHI--------LSFYSGCVLSTQISNSFRSLQV-RRSSNMKNTSTMWAKLGMFDIY 2865
+TKHI SGCV ++ ++++ + + +S + KLG +D+Y
Sbjct: 839 ERTKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVY 897
Score = 29.3 bits (64), Expect(4) = 1e-18
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 1844 KSIYSLKQSL*A*FEKFSHITFFVGIHCSKANHFVF 1951
+S+Y LKQS A F +FS + G+ S A+H VF
Sbjct: 549 RSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVF 584
>emb|CAN75922.1| hypothetical protein VITISV_030752 [Vitis vinifera]
Length = 1214
Score = 61.6 bits (148), Expect(3) = 4e-18
Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 10/174 (5%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLSSSNHV 2249
G L+YFL E+ + LSQ KYA D ++ K +L C +DTP + V
Sbjct: 941 GKLKYFLGIEIAQSSSGVVLSQRKYALDILE-----KTGMLD---CKPVDTPMDPNVKLV 992
Query: 2250 --------DPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
DP Y + Y T+ RP+IS+ + +VSQF+ P W+ + IL Y
Sbjct: 993 PGQGEPLGDPGRYRRLVGKLN-YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYI 1051
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
K++P D GY + I G L++WKSKK
Sbjct: 1052 KSTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKK 1105
Score = 41.6 bits (96), Expect(3) = 4e-18
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSFTISLLYTLLEIECFIKIKTKHI--- 2733
Q++ + S +A+Y+ MT TCE+IWL +L++ F L+ F +TKHI
Sbjct: 1106 QDVVARSSAEAEYRAMTLATCELIWLRHLLRELRFGKDEQMKLI----FFHERTKHIEVD 1161
Query: 2734 -----LSFYSGCVLSTQI-SNSFRSLQVRRSSNMKNTSTMWAKLGMFDIY 2865
SGCV ++ + SN + +S + KLG +D+Y
Sbjct: 1162 CHFIREKIESGCVATSFVNSNDXLADIFTKSLRGPRIKYICNKLGAYDVY 1211
Score = 39.7 bits (91), Expect(3) = 4e-18
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA*R*RYAKAQIYL*P*AKSLSLV*KVFSYYFL 1911
L+QL++KN FL+G+L++EVY+E+ G+VA LV ++ +
Sbjct: 844 LYQLDIKNAFLHGDLAEEVYMEQPPGFVA---------------QGESGLVCRLRRSLYG 888
Query: 1912 CRDS----L*QSKSFCLCLNTKIKIVYLVAYVDENLLI--DTDALNQAP--FYAHFVMKD 2067
+ S + S C +YLV YVD+ ++ D D + + + HF KD
Sbjct: 889 LKQSPRAWFDRFSSVC---------IYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKD 939
Query: 2068 LG 2073
LG
Sbjct: 940 LG 941
>gb|KYP58900.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 512
Score = 63.2 bits (152), Expect(4) = 1e-17
Identities = 53/174 (30%), Positives = 72/174 (41%), Gaps = 10/174 (5%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTP-----KLS 2234
G L+YFL EV + I +SQ KYA D +K L C +D+P KL
Sbjct: 226 GHLRYFLGIEVAQSKEGIVISQRKYAIDILKETGMLD--------CKPIDSPMDPNQKLM 277
Query: 2235 SSN---HVDPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
+ DP Y Y T+ RP++S+ +GIVSQFM P W + IL Y
Sbjct: 278 ADQGELFTDPERYRRLVGKL-IYLTITRPDLSFAVGIVSQFMQAPHIDHWNAVLRILRYI 336
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
K +P +D GY + + G L++WKSKK
Sbjct: 337 KKAPGQGLLYEDKGDSQISGYCDADWAGCPIDRRSTTGYCVFLGGNLISWKSKK 390
Score = 42.0 bits (97), Expect(4) = 1e-17
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA-------*R*RYAKAQIYL*P*AKSLSLV*K 1890
LHQL++KN FL+G L +E+Y+E+ G+VA R R + + P A
Sbjct: 105 LHQLDIKNAFLHGELEEEIYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRA-WFGKFSH 163
Query: 1891 VFSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDENLLIDTDALN----QAPFYAHFV 2058
V + L R S C + + VYL+ YVD+ ++ DA + ++ F
Sbjct: 164 VVQNFGLKRSE--ADHSVFYCHTSPGRCVYLIVYVDDIVITGNDATTISQLKKHLFSQFQ 221
Query: 2059 MKDLG 2073
KDLG
Sbjct: 222 TKDLG 226
Score = 31.2 bits (69), Expect(4) = 1e-17
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSF 2667
QN+ + S +A+Y+ M TCE++W+ L++ F
Sbjct: 391 QNVVARSSAEAEYRAMALITCELMWIKQLLQELKF 425
Score = 24.6 bits (52), Expect(4) = 1e-17
Identities = 16/73 (21%), Positives = 28/73 (38%)
Frame = +3
Query: 1431 PKACNKAVLVS*WN*RMDE*SGTFHYVGEWTFVSSLPSANHFTCRWVHNINYHMECIINI 1610
PK ++A+ W M + G W V P CRWV+ I + ++
Sbjct: 1 PKNVHEALDHPGWRQAMIAEMQALEHSGTWELVPLPPGKQPVGCRWVYAIKVGPDGTVDR 60
Query: 1611 ARPYLLVRFHLDI 1649
+ L+ + + I
Sbjct: 61 LKARLVAKGYTQI 73
>gb|KYP60096.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 496
Score = 63.2 bits (152), Expect(4) = 3e-17
Identities = 53/174 (30%), Positives = 72/174 (41%), Gaps = 10/174 (5%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTP-----KLS 2234
G L+YFL EV + I +SQ KYA D +K L C +D+P KL
Sbjct: 210 GHLRYFLGIEVAQSKEGIVISQRKYAIDILKETGMLD--------CKPIDSPMDPNQKLM 261
Query: 2235 SSN---HVDPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
+ DP Y Y T+ RP++S+ +GIVSQFM P W + IL Y
Sbjct: 262 ADQGEPFTDPERYRRLVGKL-IYLTITRPDLSFAVGIVSQFMQAPHIDHWNAVLRILRYI 320
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
K +P +D GY + + G L++WKSKK
Sbjct: 321 KKAPGQGLLYEDKGDSQISGYCDADWAGCPIDRRSTTGYCVFLGGNLISWKSKK 374
Score = 42.0 bits (97), Expect(4) = 3e-17
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA-------*R*RYAKAQIYL*P*AKSLSLV*K 1890
LHQL++KN FL+G L +E+Y+E+ G+VA R R + + P A
Sbjct: 89 LHQLDIKNAFLHGELEEEIYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRA-WFGKFSH 147
Query: 1891 VFSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDENLLIDTDALN----QAPFYAHFV 2058
V + L R S C + + VYL+ YVD+ ++ DA + ++ F
Sbjct: 148 VVQNFGLKRSE--ADHSVFYCHTSPGRCVYLIVYVDDIVITGNDATTISQLKKHLFSQFQ 205
Query: 2059 MKDLG 2073
KDLG
Sbjct: 206 TKDLG 210
Score = 31.2 bits (69), Expect(4) = 3e-17
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSF 2667
QN+ + S +A+Y+ M TCE++W+ L++ F
Sbjct: 375 QNVVARSSAEAEYRAMALITCELMWIKQLLQELKF 409
Score = 23.1 bits (48), Expect(4) = 3e-17
Identities = 11/46 (23%), Positives = 19/46 (41%)
Frame = +3
Query: 1512 GEWTFVSSLPSANHFTCRWVHNINYHMECIINIARPYLLVRFHLDI 1649
G W V P CRWV+ I + ++ + L+ + + I
Sbjct: 12 GTWELVPLPPGKQPVGCRWVYAIKVGPDGTVDRLKARLVAKGYTQI 57
>emb|CAN80753.1| hypothetical protein VITISV_003323 [Vitis vinifera]
Length = 1304
Score = 62.0 bits (149), Expect(3) = 3e-17
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 10/174 (5%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLSSSNHV 2249
G L+YFL E+ + LSQ KYA D ++ L C +DTP + V
Sbjct: 1034 GKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLD--------CKPVDTPMDPNVKLV 1085
Query: 2250 --------DPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
DP Y + Y T+ RP+IS+ + +VSQF+ P W+ + IL Y
Sbjct: 1086 PGQGEPLGDPGRYRQLVGKLN-YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYI 1144
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
K++P D GY + I G L++WKSKK
Sbjct: 1145 KSTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRFTSGYCVFIGGNLISWKSKK 1198
Score = 40.8 bits (94), Expect(3) = 3e-17
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA-------*R*RYAKAQIYL*P*AKSLSLV*K 1890
L+QL++KN FL+G+L++EVY+E+ G+VA R R + + P A S
Sbjct: 913 LYQLDIKNAFLHGDLAEEVYMEQPPGFVAPGESGLVCRLRRSLYGLKQSPRA-WFSRFSS 971
Query: 1891 VFSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDENLLI--DTDALNQAP--FYAHFV 2058
V + + R + S N+ + +YLV YVD+ ++ D D + + + HF
Sbjct: 972 VVQEFGMLRST--ADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQ 1029
Query: 2059 MKDLG 2073
KDLG
Sbjct: 1030 TKDLG 1034
Score = 37.0 bits (84), Expect(3) = 3e-17
Identities = 26/108 (24%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSFTISLLYTL------LEIECFIKIKT 2724
Q++ + S +A+Y+ M TCE+IWL +L+ + I+ +E++C+ I+
Sbjct: 1199 QDVVARSSAEAEYRAMALATCELIWLRHLLSGAALHIASNPVFHERTKHIEVDCYF-IRE 1257
Query: 2725 KHILSFYSGCVLSTQISNSFRSLQV-RRSSNMKNTSTMWAKLGMFDIY 2865
K SGC+ ++ ++++ + + +S + KLG +D+Y
Sbjct: 1258 K----IASGCIATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVY 1301
>emb|CAN75362.1| hypothetical protein VITISV_033265 [Vitis vinifera]
Length = 710
Score = 62.0 bits (149), Expect(3) = 6e-17
Identities = 42/116 (36%), Positives = 58/116 (50%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLSSSNHV 2249
G+L++FL EV + + + LSQ KY D ++ L A + P LD K +
Sbjct: 449 GNLRFFLGIEVAHGKQGLVLSQRKYVTDLLQETGLLGAKPADVPMEPNLDMWK-EDDDFE 507
Query: 2250 DPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYRKASP 2417
D Y Y T+ RP+I +VM ++SQFM +PK C E D IL Y K SP
Sbjct: 508 DSAQYRRLVGKL-IYLTVTRPDIXHVMXLISQFMEKPKKCHQEADCNILRYIKKSP 562
Score = 41.6 bits (96), Expect(3) = 6e-17
Identities = 17/29 (58%), Positives = 26/29 (89%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA 1818
++QL++KN FLYG+L +EVY+E+L G+VA
Sbjct: 345 MYQLDIKNAFLYGDLIEEVYMEQLPGFVA 373
Score = 35.4 bits (80), Expect(3) = 6e-17
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2
Query: 1844 KSIYSLKQSL*A*FEKFSHITFFVGIHCSKANHFVFV 1954
++IY LK A F+KF+H+ F G S+A+H VFV
Sbjct: 385 QAIYGLKXXPRAWFDKFNHVVFAXGFRRSQADHSVFV 421
>emb|CAN71246.1| hypothetical protein VITISV_011986 [Vitis vinifera]
Length = 937
Score = 60.8 bits (146), Expect(4) = 6e-17
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 10/174 (5%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLSSSNHV 2249
G L+YFL E+ + LSQ KYA D ++ L C +DTP + V
Sbjct: 651 GKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLD--------CKPVDTPMDPNVKLV 702
Query: 2250 --------DPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
DP Y + Y T+ RP+IS+ + +VSQF+ P W+ + IL Y
Sbjct: 703 PGQGEPLGDPGRYRRLVGKLN-YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILXYI 761
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
K++P D GY + I G L++WKSKK
Sbjct: 762 KSTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKK 815
Score = 41.6 bits (96), Expect(4) = 6e-17
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 13/148 (8%)
Frame = +1
Query: 1669 FFPVGGPTLLRVIL--VVN*D*QLHQLNVKNTFLYGNLSKEVYIEKLLGYVA-------* 1821
F PVG +R++L L+QL++KN FL+G+L++EVY+E+ G+VA
Sbjct: 507 FSPVGKIXSVRLLLSMAAMCSWPLYQLDIKNVFLHGDLAEEVYMEQPPGFVAQGESGLVC 566
Query: 1822 R*RYAKAQIYL*P*AKSLSLV*KVFSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDE 2001
R R + + P A S V + + R + S N+ + +YLV YVD+
Sbjct: 567 RLRRSLYGLKQSPRA-WFSRFSSVVQEFGMXRST--ADHSVFYHHNSLGQCIYLVVYVDD 623
Query: 2002 NLLI--DTDALNQAP--FYAHFVMKDLG 2073
++ D D + + + HF KDLG
Sbjct: 624 IVITGSDQDGIQKLKQHLFTHFQTKDLG 651
Score = 34.3 bits (77), Expect(4) = 6e-17
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSF-TISLLYTLLEIECFIKI------- 2718
Q++ + S +A+Y+ M TCE+IWL +L++ F + + + + + I
Sbjct: 816 QDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASNPVFH 875
Query: 2719 -KTKHI--------LSFYSGCVLSTQISNSFRSLQV-RRSSNMKNTSTMWAKLGMFDIY 2865
+TKHI SGCV ++ ++++ + + +S + KLG +D+Y
Sbjct: 876 ERTKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVY 934
Score = 21.6 bits (44), Expect(4) = 6e-17
Identities = 10/38 (26%), Positives = 14/38 (36%)
Frame = +3
Query: 1467 WN*RMDE*SGTFHYVGEWTFVSSLPSANHFTCRWVHNI 1580
W M + H G W V + CRWV+ +
Sbjct: 438 WRQAMVDEMTALHSNGTWDLVILPSGKSTVGCRWVYAV 475
>emb|CAN72440.1| hypothetical protein VITISV_039162 [Vitis vinifera]
Length = 1253
Score = 62.4 bits (150), Expect(3) = 7e-17
Identities = 50/174 (28%), Positives = 72/174 (41%), Gaps = 10/174 (5%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLSSSNHV 2249
G L+YFL E+ + LSQ KYA D ++ L C +DTP + V
Sbjct: 967 GKLKYFLGIEIAQSSSXVVLSQRKYALDILEETGMLD--------CKPVDTPMDPNVKLV 1018
Query: 2250 --------DPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
DP Y + Y T+ RP+IS+ + +VSQF+ P W+ + IL Y
Sbjct: 1019 XGQGEPLGDPGRYRRLVGKLN-YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYI 1077
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
K++P + D GY + I G L++WKSKK
Sbjct: 1078 KSTPGQGVLYENRGHTQVVGYTDADWVGSPTDRRSTSGYCVFIGGNLISWKSKK 1131
Score = 40.4 bits (93), Expect(3) = 7e-17
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA-------*R*RYAKAQIYL*P*AKSLSLV*K 1890
L+QL++KN FL+G+L++EVY+E+ G+VA R R + + P A S
Sbjct: 846 LYQLDIKNXFLHGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRA-WFSRFSS 904
Query: 1891 VFSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDENLLI--DTDALNQAP--FYAHFV 2058
V + + R + S N+ + +YLV YVD+ ++ D D + + + HF
Sbjct: 905 VVQEFGMLRST--ADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQ 962
Query: 2059 MKDLG 2073
KDLG
Sbjct: 963 TKDLG 967
Score = 35.8 bits (81), Expect(3) = 7e-17
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSF----TISLLY---TLLEIEC--FIK 2715
Q++ + S +A+Y+ M TCE+IWL +L++ F + L+Y L I
Sbjct: 1132 QDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGKDEQMKLIYDNQAALHIASNPVFH 1191
Query: 2716 IKTKHI--------LSFYSGCVLSTQISNSFRSLQV-RRSSNMKNTSTMWAKLGMFDIY 2865
+TKHI SGCV ++ ++++ + + +S + KLG +D+Y
Sbjct: 1192 ERTKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVY 1250
>gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1355
Score = 57.8 bits (138), Expect(4) = 7e-17
Identities = 49/166 (29%), Positives = 67/166 (40%), Gaps = 2/166 (1%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLSSSNHV 2249
G L+YFL EV I +SQ KYA D ++ + + P + +
Sbjct: 1069 GPLRYFLGIEVAQSKSGIAISQRKYALDILEETGLTDCKPVDTPMDPNVKLMPNQGEPYP 1128
Query: 2250 DPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYRKASPKXXX 2429
DP Y + Y TM RP+IS+ + +VSQF++ P W V IL Y K SP
Sbjct: 1129 DPGRYRRLVGKLN-YLTMTRPDISFPVSVVSQFLNSPCESHWLAVVRILRYIKRSPGKGL 1187
Query: 2430 XXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
D GY + + G LV+WKSKK
Sbjct: 1188 VYNDRGHTNIVGYSDADWAGDASDRRSTSGYCVFMGGNLVSWKSKK 1233
Score = 37.7 bits (86), Expect(4) = 7e-17
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA--*R*RYAKAQIYL*P*AKS----LSLV*KV 1893
L QL++KN FL+G+L +E+Y+++ G+VA K Q L +S KV
Sbjct: 948 LFQLDIKNAFLHGDLEEEIYMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKV 1007
Query: 1894 FSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDENLLIDTD-----ALNQAPFYAHFV 2058
+ + R S F ++ + +YLV YVD+ ++ D AL Q + HF
Sbjct: 1008 IQEFGMIRCETDHSVFF--RRSSTHRFIYLVVYVDDIVITGDDQEGIKALKQ-HLFKHFQ 1064
Query: 2059 MKDLG 2073
KDLG
Sbjct: 1065 TKDLG 1069
Score = 35.0 bits (79), Expect(4) = 7e-17
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSF 2667
Q++ + S +A+Y+ M H TCE++WL LI+ F
Sbjct: 1234 QSVVARSSTEAEYRAMAHTTCELLWLKFLIQELQF 1268
Score = 27.3 bits (59), Expect(4) = 7e-17
Identities = 17/87 (19%), Positives = 34/87 (39%)
Frame = +3
Query: 1389 SFHAFITFFFIYTIPKACNKAVLVS*WN*RMDE*SGTFHYVGEWTFVSSLPSANHFTCRW 1568
+++AF++ TIPK +A+ W M + W V + C+W
Sbjct: 830 TYYAFVSAISSITIPKTVQEALTHPGWRQAMIDEMTALDSNHTWVLVPPPLEKSVVGCQW 889
Query: 1569 VHNINYHMECIINIARPYLLVRFHLDI 1649
V N+ + +N + L+ + +
Sbjct: 890 VFNVKVGPDGQVNRLKARLVANGYTQV 916
>emb|CAN63730.1| hypothetical protein VITISV_030286 [Vitis vinifera]
Length = 1205
Score = 62.0 bits (149), Expect(3) = 2e-16
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 10/174 (5%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLSSSNHV 2249
G L+YFL E+ + LSQ KYA D ++ L C +DTP + V
Sbjct: 919 GKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLD--------CKPVDTPMDPNVKLV 970
Query: 2250 --------DPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
DP Y + Y T+ RP+IS+ + +VSQF+ P W+ + IL Y
Sbjct: 971 PGQGEPLGDPGRYRRLVGKLN-YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYI 1029
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
K++P D GY + I G L++WKSKK
Sbjct: 1030 KSTPSQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKK 1083
Score = 40.8 bits (94), Expect(3) = 2e-16
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA-------*R*RYAKAQIYL*P*AKSLSLV*K 1890
L+QL++KN FL+G+L++EVY+E+ G+VA R R + + P A S
Sbjct: 798 LYQLDIKNAFLHGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRA-WFSRFSS 856
Query: 1891 VFSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDENLLI--DTDALNQAP--FYAHFV 2058
V + + R + S N+ + +YLV YVD+ ++ D D + + + HF
Sbjct: 857 VVQEFGMLRST--ADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQ 914
Query: 2059 MKDLG 2073
KDLG
Sbjct: 915 TKDLG 919
Score = 34.7 bits (78), Expect(3) = 2e-16
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSF-TISLLYTLLEIECFIKI------- 2718
Q++ + S +A+Y+ M TCE+IWL +L++ F + + + + + I
Sbjct: 1084 QDVVARSSAEAEYRAMALATCELIWLRHLLRELRFGKDEQMKLICDNQAALHIASNPVFH 1143
Query: 2719 -KTKHI--------LSFYSGCVLSTQISNSFRSLQV-RRSSNMKNTSTMWAKLGMFDIY 2865
+TKHI SGCV ++ ++++ + + +S + KLG +D+Y
Sbjct: 1144 ERTKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVY 1202
>emb|CAN73101.1| hypothetical protein VITISV_042890 [Vitis vinifera]
Length = 772
Score = 61.2 bits (147), Expect(3) = 3e-16
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 10/174 (5%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLSSSNHV 2249
G L+YFL E+ + SQ KYA D ++ L C +DTP + V
Sbjct: 486 GKLKYFLGIEIAQSSSGVVFSQRKYALDILEETGMLD--------CKPVDTPMDPNVKLV 537
Query: 2250 --------DPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
DP Y + Y T+ RP+IS+ + +VSQF+ P W+V + IL Y
Sbjct: 538 PGQGEPLGDPGRYRRLVGKLN-YLTITRPDISFPVSVVSQFLQSPCDSHWDVVIRILRYI 596
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
K++P D GY + I G L++WKSKK
Sbjct: 597 KSTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKK 650
Score = 40.8 bits (94), Expect(3) = 3e-16
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA-------*R*RYAKAQIYL*P*AKSLSLV*K 1890
L+QL++KN FL+G+L++EVY+E+ G+VA R R + + P A S
Sbjct: 365 LYQLDIKNVFLHGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRA-WFSRFSS 423
Query: 1891 VFSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDENLLI--DTDALNQAP--FYAHFV 2058
V + + R + S N+ + +YLV YVD+ ++ D D + + + HF
Sbjct: 424 VVQEFGMLRST--ADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQ 481
Query: 2059 MKDLG 2073
KDLG
Sbjct: 482 TKDLG 486
Score = 34.7 bits (78), Expect(3) = 3e-16
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSF-TISLLYTLLEIECFIKI------- 2718
Q++ + S +A+Y+ M TCE+IWL +L++ F + + + + + I
Sbjct: 651 QDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGNDEQMKLICDNQAALHIASNPVFH 710
Query: 2719 -KTKHI--------LSFYSGCVLSTQISNSFRSLQV-RRSSNMKNTSTMWAKLGMFDIY 2865
+TKHI SGCV ++ ++++ + + +S + KLG +D+Y
Sbjct: 711 ERTKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVY 769
>emb|CAN72018.1| hypothetical protein VITISV_001841 [Vitis vinifera]
Length = 1225
Score = 61.2 bits (147), Expect(3) = 3e-16
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 10/174 (5%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLSSSNHV 2249
G L+YFL E+ + LSQ KYA D ++ L C +DTP + V
Sbjct: 939 GKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLD--------CKPVDTPMDPNVKLV 990
Query: 2250 --------DPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
DP Y + Y T+ RP+IS+ + +VSQF+ P W+ + IL Y
Sbjct: 991 PGQGEPLGDPGRYRRLVGKLN-YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYI 1049
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
K++P D GY + I G L++WKSKK
Sbjct: 1050 KSTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKK 1103
Score = 40.8 bits (94), Expect(3) = 3e-16
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA-------*R*RYAKAQIYL*P*AKSLSLV*K 1890
L+QL++KN FL+G+L++EVY+E+ G+VA R R + + P A S
Sbjct: 818 LYQLDIKNAFLHGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRA-WFSRFSS 876
Query: 1891 VFSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDENLLI--DTDALNQAP--FYAHFV 2058
V + + R + S N+ + +YLV YVD+ ++ D D + + + HF
Sbjct: 877 VVQEFGMLRST--ADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQ 934
Query: 2059 MKDLG 2073
KDLG
Sbjct: 935 TKDLG 939
Score = 34.3 bits (77), Expect(3) = 3e-16
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSF-TISLLYTLLEIECFIKI------- 2718
Q++ + S +A+Y+ M TCE+IWL +L++ F + + + + + I
Sbjct: 1104 QDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASNPVFH 1163
Query: 2719 -KTKHI--------LSFYSGCVLSTQISNSFRSLQV-RRSSNMKNTSTMWAKLGMFDIY 2865
+TKHI SGCV ++ ++++ + + +S + KLG +D+Y
Sbjct: 1164 ERTKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVY 1222
>gb|KYP55651.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 416
Score = 63.2 bits (152), Expect(3) = 4e-16
Identities = 53/174 (30%), Positives = 72/174 (41%), Gaps = 10/174 (5%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTP-----KLS 2234
G L+YFL EV + I +SQ KYA D +K L C +D+P KL
Sbjct: 130 GHLRYFLGIEVAQSKEGIVISQRKYAIDILKETGMLD--------CKPIDSPMDPNQKLM 181
Query: 2235 SSN---HVDPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
+ DP Y Y T+ RP++S+ +GIVSQFM P W + IL Y
Sbjct: 182 ADQGEPFTDPERYRRLVGKL-IYLTITRPDLSFAVGIVSQFMQAPHIDHWNAVLRILRYI 240
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
K +P +D GY + + G L++WKSKK
Sbjct: 241 KKAPGQGLLYEDKGDSQISGYCDADWAGCPIDRRSTTGYCVFLGGNLISWKSKK 294
Score = 42.0 bits (97), Expect(3) = 4e-16
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA-------*R*RYAKAQIYL*P*AKSLSLV*K 1890
LHQL++KN FL+G L +E+Y+E+ G+VA R R + + P A
Sbjct: 9 LHQLDIKNAFLHGELEEEIYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRA-WFGKFSH 67
Query: 1891 VFSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDENLLIDTDALN----QAPFYAHFV 2058
V + L R S C + + VYL+ YVD+ ++ DA + ++ F
Sbjct: 68 VVQNFGLKRSE--ADHSVFYCHTSPGRCVYLIVYVDDIVITGNDATTISQLKKHLFSQFQ 125
Query: 2059 MKDLG 2073
KDLG
Sbjct: 126 TKDLG 130
Score = 31.2 bits (69), Expect(3) = 4e-16
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSF 2667
QN+ + S +A+Y+ M TCE++W+ L++ F
Sbjct: 295 QNVVARSSAEAEYRAMALITCELMWIKQLLQELKF 329
>emb|CAN62266.1| hypothetical protein VITISV_025647 [Vitis vinifera]
Length = 1254
Score = 61.2 bits (147), Expect(3) = 4e-16
Identities = 50/174 (28%), Positives = 72/174 (41%), Gaps = 10/174 (5%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLSSSNHV 2249
G L+YFL E+ + LSQ KYA D ++ L C +DTP + V
Sbjct: 1005 GKLKYFLGIEIAQSSFGVVLSQRKYALDILEETXMLD--------CKPIDTPMDPNVKLV 1056
Query: 2250 --------DPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
DP Y + Y T+ RP+IS+ + +VSQF+ P W+ + IL Y
Sbjct: 1057 PGQGEPLRDPGRYRRLVGKLN-YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYI 1115
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
K++P + D GY + I G L++WKSKK
Sbjct: 1116 KSTPGQGVLYENRGHTQVVGYTDADWVGSPTDKRSTSGYCVFIGGNLISWKSKK 1169
Score = 42.0 bits (97), Expect(3) = 4e-16
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 11/125 (8%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA-------*R*RYAKAQIYL*P*AKSLSLV*K 1890
L+QL++KN FL+G+L++EVY+E+ +VA R R++ + P A S
Sbjct: 884 LYQLDIKNAFLHGDLAEEVYMEQPPSFVAQGESGLVCRLRHSLYGLKQSPRA-WFSRFSS 942
Query: 1891 VFSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDENLLI--DTDALNQAP--FYAHFV 2058
V + + R + S N+ + +YLV YVD+ ++I D D + + + HF
Sbjct: 943 VVQEFGMLRST--ADHSVFYHHNSLGQCIYLVVYVDDIVIIGSDQDGIQKLKQHLFTHFQ 1000
Query: 2059 MKDLG 2073
KDLG
Sbjct: 1001 TKDLG 1005
Score = 32.7 bits (73), Expect(3) = 4e-16
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSFTISLLYTLLEIEC-FIKIKTKHILS 2739
Q++ + S +A+Y+ M TCE+IW + +E++C FI+ K
Sbjct: 1170 QDVVARSSAEAEYRAMALATCELIWTKH---------------IEVDCHFIREK------ 1208
Query: 2740 FYSGCVLSTQISNSFRSLQV-RRSSNMKNTSTMWAKLGMFDIY 2865
SGCV ++ ++++ + + +S + KLG +D+Y
Sbjct: 1209 IASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVY 1251
>emb|CAN72663.1| hypothetical protein VITISV_031849 [Vitis vinifera]
Length = 912
Score = 61.2 bits (147), Expect(3) = 4e-16
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 10/174 (5%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLSSSNHV 2249
G L+YFL E+ + LSQ KYA D ++ L C +DTP + V
Sbjct: 626 GKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLD--------CKPVDTPMDPNVKLV 677
Query: 2250 --------DPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
DP Y + Y T+ RP+IS+ + +VSQF+ P W+ + IL Y
Sbjct: 678 PGQGEPLGDPGRYRRLVGKLN-YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYI 736
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVD--LFEGYALDISGRLVTWKSKK 2561
K++P D GY + I G L++WKSKK
Sbjct: 737 KSTPGQGVLYQNRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKK 790
Score = 40.8 bits (94), Expect(3) = 4e-16
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA-------*R*RYAKAQIYL*P*AKSLSLV*K 1890
L+QL++KN FL+G+L++EVY+E+ G+VA R R + + P A S
Sbjct: 505 LYQLDIKNAFLHGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRA-WFSRFSS 563
Query: 1891 VFSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDENLLI--DTDALNQAP--FYAHFV 2058
V + + R + S N+ + +YLV YVD+ ++ D D + + + HF
Sbjct: 564 VVQEFGMLRST--ADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQ 621
Query: 2059 MKDLG 2073
KDLG
Sbjct: 622 TKDLG 626
Score = 33.9 bits (76), Expect(3) = 4e-16
Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSF-TISLLYTLLEIECFIKI------- 2718
Q++ + S +A+Y+ M TCE+IWL +L++ F + + + + + I
Sbjct: 791 QDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASNPVFH 850
Query: 2719 -KTKHI--------LSFYSGCVLSTQISNSFRSLQV-RRSSNMKNTSTMWAKLGMFDIY 2865
+TKHI SGC+ ++ ++++ + + +S + KLG +D+Y
Sbjct: 851 ERTKHIEVDCHFIREKIASGCIATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVY 909
>emb|CAN75900.1| hypothetical protein VITISV_033582 [Vitis vinifera]
Length = 1041
Score = 61.6 bits (148), Expect(3) = 6e-16
Identities = 50/172 (29%), Positives = 71/172 (41%), Gaps = 8/172 (4%)
Frame = +3
Query: 2070 GSLQYFLSNEVTYQGKRIYLSQGKYANDYMKT*DYLKANLLIYLLCPVLDTPKLSSSNHV 2249
G L+YFL E+ + LSQ KYA D ++ L C +DTP + V
Sbjct: 771 GKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGILD--------CKPVDTPMDPNVKLV 822
Query: 2250 --------DPTMYHHWWANCSFYPTMNRPNISYVMGIVSQFMHEPK*CPWEVDVCILHYR 2405
DP Y + Y T+ RP+IS+ + +VSQF+ P W+ + IL Y
Sbjct: 823 PGQGEPLGDPGRYRRLVGKLN-YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYI 881
Query: 2406 KASPKXXXXXXXXXXXXXXXXXXTKVMLMMVDLFEGYALDISGRLVTWKSKK 2561
K++P GY + I G L++WKSKK
Sbjct: 882 KSTPGQDADWAGSPTDRXST--------------SGYCVFIGGNLISWKSKK 919
Score = 40.8 bits (94), Expect(3) = 6e-16
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Frame = +1
Query: 1732 LHQLNVKNTFLYGNLSKEVYIEKLLGYVA-------*R*RYAKAQIYL*P*AKSLSLV*K 1890
L+QL++KN FL+G+L++EVY+E+ G+VA R R + + P A S
Sbjct: 650 LYQLDIKNAFLHGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRA-WFSRFSS 708
Query: 1891 VFSYYFLCRDSL*QSKSFCLCLNTKIKIVYLVAYVDENLLI--DTDALNQAP--FYAHFV 2058
V + + R + S N+ + +YLV YVD+ ++ D D + + + HF
Sbjct: 709 VVQEFGMLRST--ADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQ 766
Query: 2059 MKDLG 2073
KDLG
Sbjct: 767 TKDLG 771
Score = 33.1 bits (74), Expect(3) = 6e-16
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Frame = +1
Query: 2563 QNMDVQFSCKAKYKGMTHNTCEVIWLHNLIKIFSF-TISLLYTLLEIECFIKI------- 2718
Q++ + S + +Y+ M TCE+IWL +L++ F + + + + + I
Sbjct: 920 QDVVARSSAEXEYRAMALATCELIWLRHLLRELRFGKDEQMKLICDNQAALHIASNPVFH 979
Query: 2719 -KTKHI--------LSFYSGCVLSTQISNSFRSLQV-RRSSNMKNTSTMWAKLGMFDIY 2865
+TKHI SGCV ++ ++++ + + +S + KLG +D+Y
Sbjct: 980 ERTKHIEVDCXFIREKIXSGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVY 1038