BLASTX nr result

ID: Cheilocostus21_contig00057422 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00057422
         (733 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009403853.1| PREDICTED: high mobility group B protein 6 [...    86   6e-17

>ref|XP_009403853.1| PREDICTED: high mobility group B protein 6 [Musa acuminata subsp.
           malaccensis]
          Length = 205

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 50/105 (47%), Positives = 60/105 (57%)
 Frame = -3

Query: 458 TEKELRNKDMVMQRWAMEMEKWAXXXXXXXXXXXXXXXXXXXRSSSMTFSPVQSLRENEQ 279
           TE+ LR +D VMQRWA+E+EK A                    S SM  S VQSLR  E 
Sbjct: 92  TEEVLRERDAVMQRWAVELEKRAEEQRNLELELRLLIKLQDLISCSMIPSSVQSLRHQEH 151

Query: 278 FQCMDAQSQMSSPVHSLRQKERVKSMEVQLQEAQNKEESKSMNLP 144
            Q  + QSQM+SPV SLR+KER KSME QLQ  Q+ EE+   + P
Sbjct: 152 QQSAEVQSQMTSPVRSLREKERQKSMEAQLQAPQSAEENSEADKP 196


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