BLASTX nr result

ID: Cheilocostus21_contig00057202 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00057202
         (1317 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67915.1| hypothetical protein VITISV_027926 [Vitis vinifera]    56   2e-07
emb|CAN74420.1| hypothetical protein VITISV_024222, partial [Vit...    53   6e-07
emb|CAN69890.1| hypothetical protein VITISV_005077 [Vitis vinifera]    49   1e-06
ref|XP_023920439.1| uncharacterized protein LOC112031969 [Quercu...    49   1e-06
gb|PRQ21796.1| putative nucleotidyltransferase, Ribonuclease H [...    51   1e-06
gb|PRQ29559.1| putative nucleotidyltransferase, Ribonuclease H [...    61   3e-06
emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]    54   3e-06

>emb|CAN67915.1| hypothetical protein VITISV_027926 [Vitis vinifera]
          Length = 551

 Score = 55.8 bits (133), Expect(2) = 2e-07
 Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 15/114 (13%)
 Frame = -2

Query: 482 GNEFILAVVIRISKIAHFIVCNRRTNNVYYVDKLFLME----NKLSFTIMLD-------- 339
           G++ I  VV R SK+ HFI C+ +T +V +V KLF  E    + L  TI+ D        
Sbjct: 436 GHDSIFVVVDRFSKMVHFIPCS-KTLDVVHVAKLFFKEIVRLHGLPKTIVSDQDAKFMSY 494

Query: 338 -*AIVWKNPLQNLKFSSSFNPQTN--N*VVNHSLGDSLSVLLEKRLRIGSWDTL 186
               +WK     LKFSS+F+PQT+    +VN SLGD L  L+ +   + +WD L
Sbjct: 495 FWRSLWKMLNIKLKFSSAFHPQTDGQTEIVNRSLGDLLHCLVGE--HVSNWDLL 546



 Score = 29.3 bits (64), Expect(2) = 2e-07
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 604 TCQLVKVTKQNLCLYTMLSIPYKSW 530
           TCQL K  K+N  LY  L +P++ W
Sbjct: 395 TCQLSKGRKKNTGLYMPLPVPHEPW 419


>emb|CAN74420.1| hypothetical protein VITISV_024222, partial [Vitis vinifera]
          Length = 549

 Score = 52.8 bits (125), Expect(2) = 6e-07
 Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 15/125 (12%)
 Frame = -2

Query: 512 FSLRITIKACGNEFILAVVIRISKIAHFIVCNRRTNNVYYVDKLFLME----NKLSFTIM 345
           F L + +   G   I  VV R SK+ HFI   ++ ++  YV  LF  E    + L  +I+
Sbjct: 395 FVLGLPMTQWGFNSIFVVVDRFSKMTHFIP-RKKASDASYVAALFFKEVVRLHGLPQSIV 453

Query: 344 LD*AI---------VWKNPLQNLKFSSSFNPQTN--N*VVNHSLGDSLSVLLEKRLRIGS 198
            D  +         +W      LKFSSSF+PQT+    VVNHSLG+ L  ++  +LR  +
Sbjct: 454 SDRDVKFMSYFWKTLWAKLGTQLKFSSSFHPQTDGQTKVVNHSLGNLLRCIVRDQLR--N 511

Query: 197 WDTLI 183
           WD ++
Sbjct: 512 WDNVL 516



 Score = 30.8 bits (68), Expect(2) = 6e-07
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -3

Query: 601 CQLVKVTKQNLCLYTMLSIPYKSW 530
           CQ+ K +KQN  LYT L IP K W
Sbjct: 365 CQVGKGSKQNTGLYTPLPIPSKPW 388


>emb|CAN69890.1| hypothetical protein VITISV_005077 [Vitis vinifera]
          Length = 552

 Score = 49.3 bits (116), Expect(2) = 1e-06
 Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 15/115 (13%)
 Frame = -2

Query: 482 GNEFILAVVIRISKIAHFIVCNRRTNNVYYVDKLFLME----NKLSFTIMLD-----*AI 330
           G++ I  +V   SK  HFI C+ +T NV +V KLF  E      L  TI+ +      + 
Sbjct: 431 GHDSIFXMVDHFSKTVHFIPCS-KTLNVVHVAKLFFKEIVRLQGLPKTIVSNQDANIMSY 489

Query: 329 VWKNPLQ----NLKFSSSFNPQTNN--*VVNHSLGDSLSVLLEKRLRIGSWDTLI 183
            W++  +     LKFSS+F+PQT++   VVN SLGD L  L+ +   + +WD ++
Sbjct: 490 FWRSLRKMLNTKLKFSSAFHPQTDSQIEVVNRSLGDLLHYLVGE--HVTNWDQIL 542



 Score = 33.5 bits (75), Expect(2) = 1e-06
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -3

Query: 604 TCQLVKVTKQNLCLYTMLSIPYKSW 530
           TCQL K  K+N+ LY  L +PYK W
Sbjct: 390 TCQLSKGGKKNIGLYMSLLVPYKPW 414


>ref|XP_023920439.1| uncharacterized protein LOC112031969 [Quercus suber]
          Length = 606

 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 15/114 (13%)
 Frame = -2

Query: 479 NEFILAVVIRISKIAHFIVCNRRTNNVYYVDKLFLME----NKLSFTIMLD*AI------ 330
           ++ IL VV R SK+AHF+ C+ +T+N   + KL+  E      L  TI+ D  +      
Sbjct: 445 HDSILVVVDRFSKMAHFLPCS-KTSNASKIAKLYFDEIVKLYGLPKTIVFDRGVHFISYF 503

Query: 329 ---VWKNPLQNLKFSSSFNPQTN--N*VVNHSLGDSLSVLLEKRLRIGSWDTLI 183
              +W      LKFS +F+PQT+    VVN+SLG+ L  L+    +  +WD+++
Sbjct: 504 WKTLWHLVGTKLKFSMAFHPQTDGQTEVVNYSLGNLLRCLMGGANQ--NWDSIL 555



 Score = 33.9 bits (76), Expect(2) = 1e-06
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = -3

Query: 604 TCQLVKVTKQNLCLYTMLSIPYKSW 530
           TCQL K  KQN  LYT L +P +SW
Sbjct: 403 TCQLAKHHKQNTGLYTPLPVPDRSW 427


>gb|PRQ21796.1| putative nucleotidyltransferase, Ribonuclease H [Rosa chinensis]
          Length = 489

 Score = 50.8 bits (120), Expect(2) = 1e-06
 Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 15/101 (14%)
 Frame = -2

Query: 479 NEFILAVVIRISKIAHFIVCNRRTNNVYYVDKLFLME----NKLSFTIMLD*AI------ 330
           N+ I  VV R SK+AHF+ C+ +T++  ++ KLF  E    + L  TI+ D  +      
Sbjct: 98  NDSIFVVVDRFSKMAHFVPCS-KTSDAVHIAKLFFQEVVRLHGLPKTIVSDRDVKFTSYF 156

Query: 329 ---VWKNPLQNLKFSSSFNPQTN--N*VVNHSLGDSLSVLL 222
              +WK     L+FSS+F+PQT+     VN SLG+ L  L+
Sbjct: 157 WRTLWKLLNSKLQFSSAFHPQTDGQTEAVNQSLGELLRCLV 197



 Score = 31.6 bits (70), Expect(2) = 1e-06
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 604 TCQLVKVTKQNLCLYTMLSIPYKSW 530
           TCQ+ K  K+N+ LYT L +P++ W
Sbjct: 56  TCQVCKGRKKNVGLYTPLPVPHEPW 80


>gb|PRQ29559.1| putative nucleotidyltransferase, Ribonuclease H [Rosa chinensis]
          Length = 680

 Score = 61.2 bits (147), Expect = 3e-06
 Identities = 91/320 (28%), Positives = 141/320 (44%), Gaps = 52/320 (16%)
 Frame = -2

Query: 986  DHK*LKHM---KKLSDEHTGSIEFL*EYTFVFKYNND------------NECPSLMI*WL 852
            DH+ L+++   K+L+  H    EF+ EYTFV K+ +             N    +M   +
Sbjct: 171  DHEALRYLNSQKRLNPRHAKWAEFIQEYTFVLKHKSGVENKVADALSRRNSLLHIMSVEV 230

Query: 851  RGWTQQ-------PFFTLYIFYSCER*KPI*FY*LCNS**FLFKGTQ----------FLV 723
             G+          P F        E+      + L +   FLFKGT+          FL+
Sbjct: 231  AGFNNLKEEYLSCPDFGRIYSALLEKQSKSTEFVLQDG--FLFKGTKLCIPCTSVRDFLI 288

Query: 722  **LHAKGLIG*FGTDKINA*FID*IFKSSAKQVTAK-----NPVHLSVS*SY*TKLMSVY 558
              LHA G+ G FG DK  A   D  +  S K+  AK         L+      T L +  
Sbjct: 289  LELHAGGIAGHFGRDKTIALVEDRFYWPSLKRDVAKVVERCRTCQLAKHKRQNTGLYTPL 348

Query: 557  NVIYSI*VMVTP**RFSLRITIKACGNEFILAVVIRISKIAHFIVCNRRTNNVYYVDKLF 378
             V ++    ++    F L +      ++ I  VV R SK+AHF+ C+ +T +   V KLF
Sbjct: 349  PVPHTPWQDISM--DFVLGLPKTTQRHDSIFVVVDRFSKMAHFLPCS-KTFDASEVAKLF 405

Query: 377  LME----NKLSFTIMLD*AI---------VWKNPLQNLKFSSSFNPQTN--N*VVNHSLG 243
            + E    + L  TI+ D  +         +W      LKFSS+++PQT+    VVN SLG
Sbjct: 406  MDEVVRLHGLPKTIVSDRDVRFMSYFWKTLWHMLGTKLKFSSAYHPQTDGQTEVVNRSLG 465

Query: 242  DSLSVLLEKRLRIGSWDTLI 183
            + L  L+ + +R  SWD+++
Sbjct: 466  NLLRSLVGEHIR--SWDSIL 483


>emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]
          Length = 1323

 Score = 54.3 bits (129), Expect(2) = 3e-06
 Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 15/115 (13%)
 Frame = -2

Query: 482  GNEFILAVVIRISKIAHFIVCNRRTNNVYYVDKLFLME----NKLSFTIMLD*AI----- 330
            G + I  VV R SK+ HFI C ++T+N  YV  LF  E    + L  +I+ +  +     
Sbjct: 955  GFDSIFVVVDRFSKMTHFIPC-KKTSNASYVTALFFKEVVQLHGLPQSIVSNRDVKFMSY 1013

Query: 329  ----VWKNPLQNLKFSSSFNPQTN--N*VVNHSLGDSLSVLLEKRLRIGSWDTLI 183
                +W      LKFSSSF+PQT+    VVN SLG+ L  ++  +LR  +WD ++
Sbjct: 1014 FWKTLWVKLGTQLKFSSSFHPQTDGQTEVVNRSLGNLLRCIVRDQLR--NWDNVL 1066



 Score = 26.9 bits (58), Expect(2) = 3e-06
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 589 KVTKQNLCLYTMLSIPYKSW 530
           K  KQN  LYT L +P+K W
Sbjct: 919 KGLKQNTGLYTPLPVPFKPW 938


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