BLASTX nr result

ID: Cheilocostus21_contig00057087 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00057087
         (434 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77834.1| hypothetical protein VITISV_024733 [Vitis vinifera]    33   4e-06

>emb|CAN77834.1| hypothetical protein VITISV_024733 [Vitis vinifera]
          Length = 1300

 Score = 33.5 bits (75), Expect(3) = 4e-06
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 102 LLDIARIFLLHMHTPRHFLRD-VLIACYLLPIMLLNICH 215
           L++ AR  LLH H P  F  D VL  CYL+  ML  + H
Sbjct: 475 LVETARTLLLHSHVPFRFWGDXVLTTCYLINRMLSFVLH 513



 Score = 32.7 bits (73), Expect(3) = 4e-06
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +1

Query: 31  GIIHQTTCVYTSQQNRVTEYKNHH 102
           GIIHQ++  +T QQN V E KN H
Sbjct: 451 GIIHQSSYAHTPQQNGVAERKNRH 474



 Score = 30.8 bits (68), Expect(3) = 4e-06
 Identities = 16/64 (25%), Positives = 33/64 (51%)
 Frame = +2

Query: 242 KLSPHIVCCISLGYAQNQRAYGFIGVTIQ*VNIHFVNVDIIIYKSTLYFSYSKNIIIDTS 421
           KLS     CI LGY++ Q+ Y          + +F+++D+  ++ + +FS S++  +   
Sbjct: 550 KLSARATKCIFLGYSKLQKGYRCYSSE---THRYFLSIDVTFFEDSSFFSTSESFPVSEV 606

Query: 422 TLIP 433
             +P
Sbjct: 607 LPLP 610


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