BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00056507
         (652 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021692914.1| uncharacterized protein LOC110673970 isoform...    92   1e-33
dbj|GAU17298.1| hypothetical protein TSUD_110150 [Trifolium subt...   100   3e-32
gb|PNY00121.1| hypothetical protein L195_g023397 [Trifolium prat...    99   4e-32
gb|KOM57691.1| hypothetical protein LR48_Vigan11g072400 [Vigna a...   108   2e-31
dbj|GAU50456.1| hypothetical protein TSUD_373220 [Trifolium subt...   119   7e-31
dbj|GAU25866.1| hypothetical protein TSUD_164070 [Trifolium subt...   116   2e-30
gb|PNX94272.1| retrotransposon-related protein [Trifolium pratense]   114   1e-29
dbj|GAU42077.1| hypothetical protein TSUD_326550 [Trifolium subt...   113   2e-29
gb|PNY15768.1| retrotransposon-related protein, partial [Trifoli...   114   2e-29
gb|PNX92072.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   114   3e-29
gb|PNX92424.1| retrotransposon-related protein [Trifolium pratense]   111   5e-29
gb|KYP58323.1| Retrotransposable element Tf2 [Cajanus cajan]          115   5e-29
gb|PNX97560.1| retrotransposon-related protein, partial [Trifoli...   115   1e-28
dbj|GAU25313.1| hypothetical protein TSUD_375770, partial [Trifo...   110   1e-28
dbj|GAU25040.1| hypothetical protein TSUD_155140 [Trifolium subt...   115   2e-28
gb|KYP35909.1| Retrovirus-related Pol polyprotein from transposo...   114   2e-28
gb|PNX97977.1| hypothetical protein L195_g021217, partial [Trifo...   111   2e-28
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   111   2e-28
dbj|GAU26428.1| hypothetical protein TSUD_293930 [Trifolium subt...   107   5e-28
dbj|GAU29880.1| hypothetical protein TSUD_379700 [Trifolium subt...   112   5e-28

>ref|XP_021692914.1| uncharacterized protein LOC110673970 isoform X1 [Hevea
           brasiliensis]
          Length = 936

 Score = 91.7 bits (226), Expect(4) = 1e-33
 Identities = 48/110 (43%), Positives = 69/110 (62%)
 Frame = +2

Query: 68  ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
           I+ F ++    + A+S YE+ELM LVL +QHWRPYL+G KF V T+Q++L+HLL Q  +T
Sbjct: 270 IAYFSKAISNKSTAQSAYERELMALVLAIQHWRPYLIGRKFTVRTDQRSLKHLLLQQAST 329

Query: 248 LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSRLRSMLNERQFLDLYSWI 397
              Q WL+K +GY+  + YK    N+ AD  SR R    E Q + +  W+
Sbjct: 330 PAQQYWLSKLMGYSFMIEYKTGISNKAADALSR-RDEEVELQAISVPQWV 378



 Score = 41.6 bits (96), Expect(4) = 1e-33
 Identities = 18/45 (40%), Positives = 28/45 (62%)
 Frame = +3

Query: 453 ELEVATN*TNSFEVIKVRLFYKGCMVLPLKSNWVTTLLYECHHTP 587
           EL   +     + +I  RL+YKG +VLP +S+W++ L+ E H TP
Sbjct: 399 ELSAGSKVQPGYSLIHDRLYYKGRLVLPAQSDWISKLIAEFHDTP 443



 Score = 39.3 bits (90), Expect(4) = 1e-33
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +3

Query: 12  ECDALGRNIGVVLMQKGKSLAYFSKAL 92
           ECDA G  +G VLMQ+ + +AYFSKA+
Sbjct: 251 ECDASGSGVGAVLMQQNRPIAYFSKAI 277



 Score = 39.3 bits (90), Expect(4) = 1e-33
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +2

Query: 593 GHSRAYRTYRRLADNVYWRG 652
           GHS A+RTYRR+A N YWRG
Sbjct: 446 GHSGAFRTYRRMASNFYWRG 465


>dbj|GAU17298.1| hypothetical protein TSUD_110150 [Trifolium subterraneum]
          Length = 1558

 Score = 99.8 bits (247), Expect(4) = 3e-32
 Identities = 48/94 (51%), Positives = 63/94 (67%)
 Frame = +2

Query: 68   ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
            I+ F ++    N+AKS YE+ELM + L VQHWRPYLLG  F V T+Q++L+ L  Q ITT
Sbjct: 924  IAFFSKALAGKNLAKSAYERELMAVALAVQHWRPYLLGRHFTVTTDQRSLKQLWQQKITT 983

Query: 248  LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSRL 349
             D QNW  K LGY  +++YK   +NR AD  SR+
Sbjct: 984  PDQQNWATKLLGYQFDIVYKPGVENRGADALSRI 1017



 Score = 40.8 bits (94), Expect(4) = 3e-32
 Identities = 17/30 (56%), Positives = 23/30 (76%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           F++ECDA G  +G +LMQ  K +A+FSKAL
Sbjct: 902 FVVECDASGVGLGAILMQGKKPIAFFSKAL 931



 Score = 37.4 bits (85), Expect(4) = 3e-32
 Identities = 16/20 (80%), Positives = 16/20 (80%)
 Frame = +2

Query: 593  GHSRAYRTYRRLADNVYWRG 652
            GHS  YRTYRRLA NVYW G
Sbjct: 1101 GHSGFYRTYRRLAANVYWVG 1120



 Score = 29.3 bits (64), Expect(4) = 3e-32
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +3

Query: 453  ELEVATN*TNSFEVIKVRLFYKGCMVLPLKSNWVTTLLYECHHTPT 590
            EL+V  +    F   +  LFY+G +VL  +S+ +  +L E H TPT
Sbjct: 1054 ELKVDPSARAGFTYKQSVLFYEGGLVLSAQSSLIPKMLDEFHITPT 1099


>gb|PNY00121.1| hypothetical protein L195_g023397 [Trifolium pratense]
          Length = 1118

 Score = 99.4 bits (246), Expect(4) = 4e-32
 Identities = 54/113 (47%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
 Frame = +2

Query: 68  ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
           I+ F ++    N+ KS YEKELM +VL +QHWRPYL+G KF V T+QK+L+ LL Q + T
Sbjct: 489 IAYFSKALGVRNLTKSVYEKELMAVVLSIQHWRPYLIGRKFVVSTDQKSLKQLLQQRMVT 548

Query: 248 LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSRL-RSMLNERQFLDLYSWIQE 403
            D QNW AK LGY+ ++IYK  + N  AD  SR+    LN  Q +  + W  E
Sbjct: 549 ADQQNWAAKLLGYDFDIIYKPGRLNSGADALSRVNEGELN--QVITSFHWKDE 599



 Score = 42.7 bits (99), Expect(4) = 4e-32
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           F+IECDA G  IG +LMQ  + +AYFSKAL
Sbjct: 467 FLIECDASGGGIGAILMQDRRPIAYFSKAL 496



 Score = 35.4 bits (80), Expect(4) = 4e-32
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = +2

Query: 593 GHSRAYRTYRRLADNVYWRG 652
           GHS  Y+TYRR+A NVYW G
Sbjct: 665 GHSGFYKTYRRIAANVYWVG 684



 Score = 29.3 bits (64), Expect(4) = 4e-32
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 507 LFYKGCMVLPLKSNWVTTLLYECHHTP 587
           L Y+G +V+  KS+ + TLL E H TP
Sbjct: 636 LLYEGRLVISAKSSMIPTLLSEFHTTP 662


>gb|KOM57691.1| hypothetical protein LR48_Vigan11g072400 [Vigna angularis]
          Length = 919

 Score =  108 bits (270), Expect(3) = 2e-31
 Identities = 53/93 (56%), Positives = 66/93 (70%)
 Frame = +2

Query: 68  ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
           I+ F ++  + ++ KS YEKELM LVL +QHWRPYLLG KF V T+QK+LR+LL+Q ITT
Sbjct: 306 IAFFSKALSDSSLTKSIYEKELMALVLAIQHWRPYLLGQKFVVFTDQKSLRYLLEQRITT 365

Query: 248 LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSR 346
              QNWLAK LGY  E+ Y+    N VAD  SR
Sbjct: 366 QSQQNWLAKLLGYEFEIKYRTGASNHVADGLSR 398



 Score = 42.4 bits (98), Expect(3) = 2e-31
 Identities = 17/30 (56%), Positives = 23/30 (76%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           F++ECDA G  +G VL QK + +A+FSKAL
Sbjct: 284 FVVECDASGTGVGAVLSQKNRPIAFFSKAL 313



 Score = 33.5 bits (75), Expect(3) = 2e-31
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = +3

Query: 447 YGELEVATN*TNSFEVIKVRLFYKGCMVLPLKSNWVTTLLYECHHTPT 590
           + EL V  N   ++ +   RL YKG +VL  KS W+  LL E H + T
Sbjct: 438 FEELRVDPNSHPAYTLEHGRLHYKGRLVLSAKSVWIPRLLAEFHSSVT 485


>dbj|GAU50456.1| hypothetical protein TSUD_373220 [Trifolium subterraneum]
          Length = 1463

 Score =  119 bits (298), Expect(2) = 7e-31
 Identities = 74/197 (37%), Positives = 108/197 (54%), Gaps = 2/197 (1%)
 Frame = +2

Query: 68   ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
            ++ F ++    N++KS YEKELM +VL +QHWRPYLLG KF V T+QK+L+ L+ Q I T
Sbjct: 837  VAYFSKALGVRNLSKSAYEKELMAVVLAIQHWRPYLLGRKFIVSTDQKSLKQLMQQKIIT 896

Query: 248  LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSRLRSMLNERQFLDLYSWIQ-EQFRLRCK 424
             + QNW AK +GY+ ++IYK  + N+ AD  SR+             +W Q EQ +    
Sbjct: 897  AEQQNWAAKLMGYDFDIIYKQGKLNKGADALSRVYEGSELNNMKSSVTWAQEEQIKTEVS 956

Query: 425  GTLLYRKLWRT*GSN*LNQL-F*SDQGSSFL*RMHGVTFEI*LGHDITL*VPSYSYKGHS 601
            G    +K+      + L+ L +   QG  F      ++ +  L   + L   S    GHS
Sbjct: 957  GDKKLQKIIAEVQQDPLSHLGYSYKQGILFYENRLVISSQSKLIPILLLEFHSTPQGGHS 1016

Query: 602  RAYRTYRRLADNVYWRG 652
              Y+TYRR+A N+YW G
Sbjct: 1017 GFYKTYRRMAANLYWIG 1033



 Score = 43.1 bits (100), Expect(2) = 7e-31
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           F+IECDA G  IG +LMQ  + +AYFSKAL
Sbjct: 815 FVIECDASGTGIGAILMQDKRPVAYFSKAL 844


>dbj|GAU25866.1| hypothetical protein TSUD_164070 [Trifolium subterraneum]
          Length = 1429

 Score =  116 bits (291), Expect(2) = 2e-30
 Identities = 75/205 (36%), Positives = 115/205 (56%), Gaps = 10/205 (4%)
 Frame = +2

Query: 68   ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
            I+ F ++    N+ KS YEKELM +VL +QHWRPYLLG KF V T+QK+L+ LL Q I T
Sbjct: 869  IAYFSKALGVKNLTKSAYEKELMAVVLAIQHWRPYLLGRKFVVSTDQKSLKQLLQQRIVT 928

Query: 248  LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSRLRSMLNERQFLDLYSWIQEQFRLRCKG 427
             + QNW AK LGY+ E++YK  + N+ AD  SR+      + F+   +W+QE+ +++ + 
Sbjct: 929  AEQQNWTAKLLGYDFEIVYKQGRLNKGADALSRIHEGAELQAFISQLTWVQEE-QVQAE- 986

Query: 428  TLLYRKLWRT*GSN*LNQLF*SDQGSSFL*RMHGVTF---EI*LGHDITL*VPSYSYK-- 592
             LL  KL +      + ++  +          +G+      + +    TL +P+   +  
Sbjct: 987  NLLDEKLQKI-----MEEVTSNPAAWPGYEYKNGILLYEGRLVISSKSTL-IPTLLDEFH 1040

Query: 593  -----GHSRAYRTYRRLADNVYWRG 652
                 GHS  Y+TYR+LA N+YW G
Sbjct: 1041 ATPSGGHSGFYKTYRKLAANLYWVG 1065



 Score = 44.3 bits (103), Expect(2) = 2e-30
 Identities = 20/30 (66%), Positives = 23/30 (76%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           F+IECDA G  IG +LMQ  K +AYFSKAL
Sbjct: 847 FMIECDASGEGIGAILMQDRKPIAYFSKAL 876


>gb|PNX94272.1| retrotransposon-related protein [Trifolium pratense]
          Length = 913

 Score =  114 bits (284), Expect(2) = 1e-29
 Identities = 72/195 (36%), Positives = 97/195 (49%)
 Frame = +2

Query: 68  ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
           ++ F ++    N+ KS YEKELM +VL +QHWRPYLLGS+FKV T+QK+L+ LL Q + T
Sbjct: 435 VAYFSKALGVRNLTKSAYEKELMAVVLAIQHWRPYLLGSRFKVFTDQKSLKELLQQRVVT 494

Query: 248 LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSRLRSMLNERQFLDLYSWIQEQFRLRCKG 427
            + QNW AK LGY+ E+IY   + NR AD  SR+       Q +    W  E+     K 
Sbjct: 495 AEQQNWAAKLLGYDFEIIYNPGRLNRGADALSRVHEGGELCQVVTSLQWTDEK---TIKK 551

Query: 428 TLLYRKLWRT*GSN*LNQLF*SDQGSSFL*RMHGVTFEI*LGHDITL*VPSYSYKGHSRA 607
            +L  K                         +  V  ++    +           GHS  
Sbjct: 552 EILQDKY------------------------LQQVIQDLKTNVNSRPEFHETPQGGHSGF 587

Query: 608 YRTYRRLADNVYWRG 652
           YRTY+RLA NVYW G
Sbjct: 588 YRTYKRLASNVYWVG 602



 Score = 44.7 bits (104), Expect(2) = 1e-29
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           FIIECDA G  IG +LMQ+ + +AYFSKAL
Sbjct: 413 FIIECDASGEGIGAILMQEKRPVAYFSKAL 442


>dbj|GAU42077.1| hypothetical protein TSUD_326550 [Trifolium subterraneum]
          Length = 1545

 Score =  113 bits (282), Expect(2) = 2e-29
 Identities = 77/203 (37%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
 Frame = +2

Query: 68   ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
            ++ F ++    N+ KS YEKELMV+VL +QHWRPYLLG KF V T+QK+L+ LL Q + T
Sbjct: 943  VAYFSKALGVRNLTKSAYEKELMVVVLAIQHWRPYLLGRKFLVSTDQKSLKQLLQQRMVT 1002

Query: 248  LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSRLRSMLNERQFLDLYSWIQEQ-FRLRCK 424
             + QNW AK LGY+ E+IYK    NR AD  SR+         +    W  E+  R   K
Sbjct: 1003 AEQQNWAAKLLGYDFEIIYKPGNLNRGADALSRVGEGAGLCNLITSVKWSDEEVVRTEVK 1062

Query: 425  GTLLYRKLWRT*GSN*LNQLF*SDQGSSFL*RMHGVTFEI*LGHDITL*VP-------SY 583
                 +++        L Q   +  G ++   +      + L    TL +P       + 
Sbjct: 1063 HDEQLQQIIHD-----LQQDINARPGFTYKQGVLLYEGRLVLSAKSTL-IPQLLVEFHAT 1116

Query: 584  SYKGHSRAYRTYRRLADNVYWRG 652
             + GHS  YRTYRR+A NVYW G
Sbjct: 1117 PHGGHSGFYRTYRRIAANVYWVG 1139



 Score = 44.7 bits (104), Expect(2) = 2e-29
 Identities = 20/30 (66%), Positives = 23/30 (76%)
 Frame = +3

Query: 3    FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
            F+IECDA G  IG +LMQ  K +AYFSKAL
Sbjct: 921  FVIECDASGEGIGAILMQDKKPVAYFSKAL 950


>gb|PNY15768.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 1583

 Score =  114 bits (284), Expect(2) = 2e-29
 Identities = 80/206 (38%), Positives = 112/206 (54%), Gaps = 11/206 (5%)
 Frame = +2

Query: 68   ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
            ++ F ++    N+AKS YEKELM +VL +QHWRPYLLG KF V T+QK+L+ L+ Q I T
Sbjct: 963  VAYFSKALGVRNLAKSAYEKELMAVVLAIQHWRPYLLGRKFVVSTDQKSLKQLMQQKIVT 1022

Query: 248  LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSRLRSMLNERQFLDLYSWIQEQFRLRCKG 427
             + QNW AK +GY+ ++IYK  + N+ AD  SR+           +  W QE+   + K 
Sbjct: 1023 AEQQNWAAKLMGYDFDIIYKQGKLNKGADALSRIHDGAEFAVLNSVVKWAQEE---QIKE 1079

Query: 428  TLLY-RKLWRT*GSN*LNQLF*SDQGSSFL*RMHGVTF---EI*LGHDITL*VPSYSYK- 592
             +L   KL +      L Q   S  G S+     GV F    + +    TL +P+   + 
Sbjct: 1080 EILKDEKLQKI--ITELQQDPMSWPGYSY---KQGVLFYEDRLVISKTSTL-IPTLLEEF 1133

Query: 593  ------GHSRAYRTYRRLADNVYWRG 652
                  GHS  Y+TYRR+A NVYW G
Sbjct: 1134 HATPQGGHSGFYKTYRRMAANVYWIG 1159



 Score = 43.5 bits (101), Expect(2) = 2e-29
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = +3

Query: 3    FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
            F+IECDA G  +G +LMQ  K +AYFSKAL
Sbjct: 941  FVIECDASGTGLGAILMQDKKPVAYFSKAL 970


>gb|PNX92072.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1498

 Score =  114 bits (284), Expect(2) = 3e-29
 Identities = 82/223 (36%), Positives = 109/223 (48%), Gaps = 28/223 (12%)
 Frame = +2

Query: 68   ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
            I+ F ++    N+ KS YEKELM +VL +QHWRPYL+G KF V T+QK+L+ LL Q + T
Sbjct: 867  IAYFSKALGVRNLTKSAYEKELMAVVLAIQHWRPYLIGRKFIVSTDQKSLKQLLQQRMVT 926

Query: 248  LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSRLRSMLNERQFLDLYSW---------IQ 400
             + QNW AK LGY+ E+IYK  + NR AD  SR+       Q +    W         IQ
Sbjct: 927  AEQQNWAAKLLGYDFEIIYKPGKLNRGADALSRVEESGELCQVITSVQWNDEEIVRAEIQ 986

Query: 401  EQFRLR------------------CKGTLLYR-KLWRT*GSN*LNQLF*SDQGSSFL*RM 523
            E  +L+                   +G LLY  +L  +  S+ ++QL      + F    
Sbjct: 987  EDSKLQQIIKDLQKDVNSRPGYVYRQGVLLYEGRLVLSDKSSLIDQLL-----TEFHATP 1041

Query: 524  HGVTFEI*LGHDITL*VPSYSYKGHSRAYRTYRRLADNVYWRG 652
            HG                     GHS  YRTYRR+A NVYW G
Sbjct: 1042 HG---------------------GHSGFYRTYRRIAANVYWIG 1063



 Score = 43.1 bits (100), Expect(2) = 3e-29
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           FIIECDA G  +G +LMQ+ + +AYFSKAL
Sbjct: 845 FIIECDASGCGLGAILMQERRPIAYFSKAL 874


>gb|PNX92424.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1554

 Score =  111 bits (278), Expect(2) = 5e-29
 Identities = 75/199 (37%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
 Frame = +2

Query: 101  NIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITTLD*QNWLAKHL 280
            N+ KS YEKELM +VL +QHWRPYLLG KF V T+QK+L+ LL Q I T + QNW AK L
Sbjct: 937  NLTKSAYEKELMAVVLAIQHWRPYLLGRKFTVSTDQKSLKQLLQQRIVTAEQQNWSAKLL 996

Query: 281  GYNMEVIYKLSQDNRVADVSSRLRSMLNERQFLDLYSWIQ-EQFRLRCKGTLLYRKLWRT 457
            GY+ +++YK  + N+ AD  SR+         +    WIQ EQ +   +      K+   
Sbjct: 997  GYDFDIVYKQGKLNKGADALSRIHEG-EINAMVSKLKWIQEEQIKTEIQADEKLSKI--- 1052

Query: 458  *GSN*LNQLF*SDQGSSFL*RMHGVTFEI*LGHDITL*VPSYS--------------YKG 595
                 +N +    +        +GV     L +D  L + S S                G
Sbjct: 1053 -----VNDILQDPRACPGYELRNGV-----LLYDGRLVISSKSLLIPVLLDEFHSSPQGG 1102

Query: 596  HSRAYRTYRRLADNVYWRG 652
            HS  Y+TYRRLA N+YW G
Sbjct: 1103 HSGFYKTYRRLAANIYWIG 1121



 Score = 44.7 bits (104), Expect(2) = 5e-29
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           F+IECDA G  IG +LMQ+ K +AY+SKAL
Sbjct: 904 FVIECDASGEGIGAILMQEKKPIAYYSKAL 933


>gb|KYP58323.1| Retrotransposable element Tf2 [Cajanus cajan]
          Length = 718

 Score =  115 bits (289), Expect(2) = 5e-29
 Identities = 78/206 (37%), Positives = 109/206 (52%), Gaps = 11/206 (5%)
 Frame = +2

Query: 68  ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
           I+ F +   + ++ KS YEKELM LVL +QHWRPYLLG KF V T+QK+LR+LL+Q ITT
Sbjct: 108 IAFFSKGLADSSLTKSIYEKELMALVLAIQHWRPYLLGRKFTVYTDQKSLRYLLEQRITT 167

Query: 248 LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSRLRS----MLNERQFLDLYSWIQEQFRL 415
            + QNWLAK LGY+ +++YK+   N+VAD  SRL          R F    + I E+ R 
Sbjct: 168 QNQQNWLAKLLGYDFDIVYKVGASNKVADALSRLHENPELQAITRPFWQDITEIDEEVRK 227

Query: 416 RCKGTLLYRKLWRT*GSN*LNQLF*SDQGSSFL*RMHGVTFEI*LGHDITL*VPSYSYKG 595
                 +   L     S    Q +  + G     R+H     +      +  +P   ++ 
Sbjct: 228 DSDLEKIRTALLHDPNS---YQYYTLEHG-----RLHHKGRLVLSA--TSSWIPKLLHEF 277

Query: 596 H-------SRAYRTYRRLADNVYWRG 652
           H       S  YRTYRR+A ++YW G
Sbjct: 278 HTSPTGGHSGIYRTYRRMAQSLYWIG 303



 Score = 40.4 bits (93), Expect(2) = 5e-29
 Identities = 18/30 (60%), Positives = 22/30 (73%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           F IECDA G+ +G VLMQ  K +A+FSK L
Sbjct: 86  FEIECDASGKGVGAVLMQDKKPIAFFSKGL 115


>gb|PNX97560.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 1201

 Score =  115 bits (288), Expect(2) = 1e-28
 Identities = 72/197 (36%), Positives = 108/197 (54%), Gaps = 2/197 (1%)
 Frame = +2

Query: 68   ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
            I+ F ++     ++KS Y+KELM LVL +QHWR YLLG +F V ++QK+LRHLL Q ITT
Sbjct: 911  IAYFSKAFASSKLSKSAYDKELMALVLAIQHWRHYLLGRRFIVYSDQKSLRHLLQQRITT 970

Query: 248  LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSRLRSMLNERQFLDLYSWIQ-EQFRLRCK 424
             + Q W+AK LG++ EVIYK+  +N+VAD  SR       +  L    W Q  Q +    
Sbjct: 971  SNQQEWMAKLLGFDFEVIYKVGVENKVADALSRKHEEAEVKTLLSYPIWTQGGQLQQEIM 1030

Query: 425  GTLLYRKLWRT*GSN*LNQL-F*SDQGSSFL*RMHGVTFEI*LGHDITL*VPSYSYKGHS 601
               + +++     S+ +++  F    G  F      ++ +  +  D+     S    GHS
Sbjct: 1031 QDPVLKQIVEAIQSDPMSKPGFTIKGGILFYKNRLVISAKSPMIDDLLKDFHSSPSGGHS 1090

Query: 602  RAYRTYRRLADNVYWRG 652
               RTYRR+A  +YW+G
Sbjct: 1091 GYLRTYRRMAGTLYWQG 1107



 Score = 39.3 bits (90), Expect(2) = 1e-28
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKA 89
           F IECDA G+ +G VLMQ    +AYFSKA
Sbjct: 889 FEIECDASGKGVGAVLMQLKHPIAYFSKA 917


>dbj|GAU25313.1| hypothetical protein TSUD_375770, partial [Trifolium subterraneum]
          Length = 1110

 Score =  110 bits (274), Expect(2) = 1e-28
 Identities = 77/205 (37%), Positives = 108/205 (52%), Gaps = 10/205 (4%)
 Frame = +2

Query: 68   ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
            I+ F ++    N+ KS YEKELM +VL +QHWRPYLLG KF V T+QK+L+ L+ Q I  
Sbjct: 539  IAYFSKALGVRNLTKSAYEKELMAVVLAIQHWRPYLLGRKFIVSTDQKSLKQLMQQRIVI 598

Query: 248  LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSRLRSMLNERQFLDLYSWIQEQFRLRCKG 427
            ++ QNW AK LGY+ E+IYK  + NR AD  SR+       Q      W Q Q +++ + 
Sbjct: 599  VEQQNWAAKLLGYDFEIIYKQGKLNRGADALSRVNEGGELSQINSFAQWDQSQ-QIKTEN 657

Query: 428  TLLYRKLWRT*GSN*LNQLF*SDQGSSFL*RMHGVTF---EI*LGHDITL*VPSYSYK-- 592
              +  KL      + + QL    +         GV      + L +   L +P+   +  
Sbjct: 658  N-MDEKL-----QDIIRQLQQDPKAKPGYEYRQGVLLYEGRLVLSNKSQL-IPTLLKEFH 710

Query: 593  -----GHSRAYRTYRRLADNVYWRG 652
                 GHS  Y+TYRR+A NVYW G
Sbjct: 711  ASPQGGHSGFYKTYRRVAANVYWLG 735



 Score = 44.7 bits (104), Expect(2) = 1e-28
 Identities = 20/30 (66%), Positives = 23/30 (76%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           F+IECDA G  IG +LMQ  K +AYFSKAL
Sbjct: 517 FVIECDASGSGIGAILMQDKKPIAYFSKAL 546


>dbj|GAU25040.1| hypothetical protein TSUD_155140 [Trifolium subterraneum]
          Length = 862

 Score =  115 bits (288), Expect(2) = 2e-28
 Identities = 73/197 (37%), Positives = 106/197 (53%), Gaps = 2/197 (1%)
 Frame = +2

Query: 68  ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
           ++ F ++    N++KS YEKELM +VL +QHWRPYLLG KF V T+QK+L+ L+ Q I T
Sbjct: 218 VAYFSKTLGVRNLSKSAYEKELMAVVLAIQHWRPYLLGRKFIVCTDQKSLKQLMQQKIIT 277

Query: 248 LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSRLRSMLNERQFLDLYSWIQE-QFRLRCK 424
            + QNW AK +GY+ ++IYK  + N+ AD  SR+             +W QE Q +    
Sbjct: 278 AEHQNWAAKLMGYDFDIIYKQGKLNKGADALSRVYEGSELNNMKSSVTWAQEEQIKTEVS 337

Query: 425 GTLLYRKLWRT*GSN*LNQLF*S-DQGSSFL*RMHGVTFEI*LGHDITL*VPSYSYKGHS 601
           G    +K+      + L+    S  QG  F      ++ +  L   + L   S    GHS
Sbjct: 338 GDKKLQKIIAEVQQDPLSHPGYSYKQGILFYENRLVISSQSKLIPILLLEFHSTPQGGHS 397

Query: 602 RAYRTYRRLADNVYWRG 652
             Y+TYRR+  N+YW G
Sbjct: 398 GFYKTYRRIVANLYWIG 414



 Score = 38.9 bits (89), Expect(2) = 2e-28
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           F+I CDA G  IG +LMQ  + +AYFSK L
Sbjct: 196 FVIVCDASGTGIGAILMQDKRPVAYFSKTL 225


>gb|KYP35909.1| Retrovirus-related Pol polyprotein from transposon 297 family
           [Cajanus cajan]
          Length = 800

 Score =  114 bits (286), Expect(2) = 2e-28
 Identities = 54/93 (58%), Positives = 69/93 (74%)
 Frame = +2

Query: 68  ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
           I+ F ++  E ++ KS YEKELM LVL +QHWRPY+LG KF V T+QK+L+HLL+Q ITT
Sbjct: 357 IAFFSKALGEASLTKSVYEKELMALVLAIQHWRPYVLGQKFTVFTDQKSLKHLLEQRITT 416

Query: 248 LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSR 346
            + QNWLAK LGY  E++YK    NR+AD  SR
Sbjct: 417 QNQQNWLAKLLGYEFEIVYKTGAANRMADALSR 449



 Score = 39.7 bits (91), Expect(2) = 2e-28
 Identities = 18/30 (60%), Positives = 22/30 (73%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           F IECDA G+ IG VL Q  + +A+FSKAL
Sbjct: 335 FSIECDASGKGIGAVLTQNKRPIAFFSKAL 364


>gb|PNX97977.1| hypothetical protein L195_g021217, partial [Trifolium pratense]
          Length = 1299

 Score =  111 bits (277), Expect(2) = 2e-28
 Identities = 79/203 (38%), Positives = 110/203 (54%), Gaps = 8/203 (3%)
 Frame = +2

Query: 68   ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
            ++ F ++    N+ KS YEKELM +VL +QHWRPYLLG +FKV T+QK+L+ LL Q I T
Sbjct: 708  VAYFSKALGVRNLTKSAYEKELMAVVLAIQHWRPYLLGRRFKVSTDQKSLKELLQQKIVT 767

Query: 248  LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSRLRSMLNERQFLDLYSWIQEQFRLRCKG 427
             + QNW AK LGY+ E+ YK  + N+ AD  SR+       Q +    W+ E  R+    
Sbjct: 768  AEQQNWAAKLLGYDFEISYKPGKLNKGADALSRINEGGALCQVVTSLQWLDE--RVLQAE 825

Query: 428  TLLYRKLWRT*GSN*LNQLF*SDQGSSFL*RMHGVTFEI*LG-HDITL*VP-------SY 583
             L  ++L +      L     S  G S+  +   + +E  L    +++ +P       S 
Sbjct: 826  VLHDQELQKV--IRELKTDMNSRPGYSY--KQGVLLYEGRLVLSKMSVMIPMLLAEFHST 881

Query: 584  SYKGHSRAYRTYRRLADNVYWRG 652
               GHS  YRTYRRLA NVYW G
Sbjct: 882  PQGGHSGFYRTYRRLAANVYWVG 904



 Score = 42.7 bits (99), Expect(2) = 2e-28
 Identities = 18/30 (60%), Positives = 24/30 (80%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           F+IECDA G  +G +LMQ+ + +AYFSKAL
Sbjct: 686 FVIECDASGGGLGAILMQEKRPVAYFSKAL 715


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  111 bits (277), Expect(2) = 2e-28
 Identities = 75/189 (39%), Positives = 99/189 (52%), Gaps = 5/189 (2%)
 Frame = +2

Query: 101  NIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITTLD*QNWLAKHL 280
            N+ KS YEKELM +VL +QHWRPYLLG +F V T+QK+L+ LL Q + T + QNW AK L
Sbjct: 710  NLTKSAYEKELMAVVLAIQHWRPYLLGRRFVVSTDQKSLKQLLQQRVVTAEQQNWAAKLL 769

Query: 281  GYNMEVIYKLSQDNRVADVSSRLRSMLNERQFLDLYSW-----IQEQFRLRCKGTLLYRK 445
            GY+ E+IYK  + N+ AD  SR+R      Q +    W     ++E+     +   +   
Sbjct: 770  GYDFEIIYKPGKLNKGADALSRVREDGELCQGITSVQWKDEKLLREELSRDSQLQKIIGD 829

Query: 446  LWRT*GSN*LNQLF*SDQGSSFL*RMHGVTFEI*LGHDITL*VPSYSYKGHSRAYRTYRR 625
            L R   S     L    QG         V+ +  +   +     S    GHS  YRTYRR
Sbjct: 830  LQRDASSRPGYML---KQGVLLYEGRLVVSSKSVMIPTLLAEFHSTPQGGHSGFYRTYRR 886

Query: 626  LADNVYWRG 652
            LA NVYW G
Sbjct: 887  LAANVYWVG 895



 Score = 42.7 bits (99), Expect(2) = 2e-28
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           F+IECDA G  IG +LMQ  K +AY+SKAL
Sbjct: 677 FVIECDASGGGIGAILMQDRKPVAYYSKAL 706


>dbj|GAU26428.1| hypothetical protein TSUD_293930 [Trifolium subterraneum]
          Length = 1388

 Score =  107 bits (267), Expect(2) = 5e-28
 Identities = 74/209 (35%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
 Frame = +2

Query: 68   ISIFQQSSLEGNIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITT 247
            I+ F ++    N+ K TYEKELM +VL +QHWRP LLG +F V T+QK+L+ LL Q I T
Sbjct: 788  IAYFSKALSGRNLTKPTYEKELMAVVLAIQHWRPCLLGRRFSVSTDQKSLKQLLQQRIAT 847

Query: 248  LD*QNWLAKHLGYNMEVIYKLSQDNRVADVSSRLRSMLNERQFLDLYSWIQEQFRLRCKG 427
             + QNW+AK LGY+ +++YK  + N+  D  S++      +  +    WIQE+ +++ + 
Sbjct: 848  AEQQNWIAKLLGYDFDIVYKQGKMNQGVDALSKIHEG-EIKAMISQLKWIQEE-QVKAEN 905

Query: 428  TLLYRKLWRT*GSN*LNQLF*SDQGSSFL*RMHGVTFEI*LGHDITL*VPSYS------- 586
                R       S  + ++  S +        +GV     L +D  L + S S       
Sbjct: 906  QADNRL------SKIMAEVTLSPEAWPGYEYRNGV-----LLYDGRLVISSQSLLIPTLL 954

Query: 587  -------YKGHSRAYRTYRRLADNVYWRG 652
                     GHS  Y+TYRRLA NVYW G
Sbjct: 955  EEFHSSPQGGHSGFYKTYRRLAANVYWIG 983



 Score = 45.4 bits (106), Expect(2) = 5e-28
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           F+IECDA G  +GV+LMQ  K +AYFSKAL
Sbjct: 766 FLIECDASGEGLGVILMQDRKPIAYFSKAL 795


>dbj|GAU29880.1| hypothetical protein TSUD_379700 [Trifolium subterraneum]
          Length = 1340

 Score =  112 bits (281), Expect(2) = 5e-28
 Identities = 70/194 (36%), Positives = 108/194 (55%), Gaps = 10/194 (5%)
 Frame = +2

Query: 101  NIAKSTYEKELMVLVLLVQHWRPYLLGSKFKVLTNQKALRHLLDQCITTLD*QNWLAKHL 280
            N+ KS YEKELM +VL +QHWRPYL+G KF V T+QK+L+ LL Q + + D QNW AK L
Sbjct: 722  NLTKSAYEKELMAVVLAIQHWRPYLIGRKFIVSTDQKSLKQLLQQRMVSADQQNWAAKLL 781

Query: 281  GYNMEVIYKLSQDNRVADVSSRLRSMLNERQFLDLYSWIQEQ-FRLRCKGTLLYRKLWRT 457
            GY+ +++YK  + N+ ADV SR+       Q +    W++E+  +   +  +  +++ + 
Sbjct: 782  GYDFDIVYKPGKLNKGADVLSRVNEGGEMFQVVSSMQWLEEEVVKAEIREDIQLQQVIKA 841

Query: 458  *GSN*LNQLF*SDQGSSFL*RMHGVTFE--I*LGHDITL*VPSYSYK-------GHSRAY 610
              S+        +    ++ R   + +E  + L     L +P+   +       GHS  Y
Sbjct: 842  LKSD-------VNSKPGYVYRQGVLLYEGRLVLSAQSAL-IPTLLAEFHATPQGGHSGFY 893

Query: 611  RTYRRLADNVYWRG 652
            RTYRR+A NVYW G
Sbjct: 894  RTYRRIATNVYWMG 907



 Score = 40.0 bits (92), Expect(2) = 5e-28
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = +3

Query: 3   FIIECDALGRNIGVVLMQKGKSLAYFSKAL 92
           FIIECDA G  I  +LMQ  + +AYFSKAL
Sbjct: 689 FIIECDASGGGIRAILMQDKRPVAYFSKAL 718