BLASTX nr result

ID: Cheilocostus21_contig00056379 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00056379
         (956 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73734.1| hypothetical protein VITISV_032119 [Vitis vinifera]    42   3e-06

>emb|CAN73734.1| hypothetical protein VITISV_032119 [Vitis vinifera]
          Length = 917

 Score = 42.4 bits (98), Expect(4) = 3e-06
 Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
 Frame = +3

Query: 516 GTSAHQPVDLVSFSLLLLYPS---KSFDEHIQDIHVDVGQKIVLSNDNYKLQ 662
           G    +P+DLV   L+   PS    +F +HI D+H DV +KI LSN+NYK Q
Sbjct: 523 GLLPRKPIDLVPL-LMEGQPSIEADAFSKHIHDLHEDVQRKIALSNENYKAQ 573



 Score = 30.4 bits (67), Expect(4) = 3e-06
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 413 LHLLLGEKIENYNLILPLALFIYNNFIVS 499
           LH L+GE + N++ ILP+  F YN+ + S
Sbjct: 483 LHSLVGEHVINWDQILPMVEFAYNSSVNS 511



 Score = 23.1 bits (48), Expect(4) = 3e-06
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 346 FHPLLYLN*QKTDMLNHSLGNILTLTVG 429
           FHP       +T+++N SLGN+L   VG
Sbjct: 464 FHPKTD---DQTEVVNQSLGNLLHSLVG 488



 Score = 22.7 bits (47), Expect(4) = 3e-06
 Identities = 8/34 (23%), Positives = 22/34 (64%)
 Frame = +2

Query: 740 KISFEKLHAHAFNLFYTVRELDSYPYVLVLPRNL 841
           K +++KLH+   + +  ++++ +  +V+ LP N+
Sbjct: 600 KGTYKKLHSKNVSPYRVLKKISTNAHVIDLPENM 633


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