BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00056128
         (1127 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP63416.1| Retrovirus-related Pol polyprotein from transposo...   448   e-156
gb|KYP61428.1| Retrovirus-related Pol polyprotein from transposo...   441   e-151
ref|XP_010559036.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LR...   429   e-142
gb|KYP46269.1| Retrovirus-related Pol polyprotein from transposo...   413   e-142
gb|PRQ52817.1| putative RNA-directed DNA polymerase [Rosa chinen...   406   e-135
emb|CAN69037.1| hypothetical protein VITISV_026270 [Vitis vinifera]   402   e-134
gb|KYP31265.1| Retrovirus-related Pol polyprotein from transposo...   399   e-134
emb|CAN63026.1| hypothetical protein VITISV_026313 [Vitis vinifera]   391   e-132
gb|PKU59787.1| Retrovirus-related Pol polyprotein from transposo...   378   e-129
gb|KYP64910.1| Retrovirus-related Pol polyprotein from transposo...   384   e-129
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...   401   e-125
emb|CAN68275.1| hypothetical protein VITISV_026802 [Vitis vinifera]   394   e-125
emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]   399   e-122
emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]   371   e-119
emb|CAN71425.1| hypothetical protein VITISV_002520 [Vitis vinifera]   361   e-118
gb|PKU63193.1| Retrovirus-related Pol polyprotein from transposo...   350   e-118
gb|KYP64870.1| Retrovirus-related Pol polyprotein from transposo...   354   e-117
emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera]   371   e-115
gb|KYP68427.1| Retrovirus-related Pol polyprotein from transposo...   342   e-115
emb|CAN61426.1| hypothetical protein VITISV_037642 [Vitis vinifera]   346   e-114

>gb|KYP63416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 278

 Score =  448 bits (1153), Expect = e-156
 Identities = 218/273 (79%), Positives = 243/273 (89%)
 Frame = +2

Query: 41  RKTISKKILERFNMDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYL 220
           +K    K+LERF M+KCS   VPI+KGDKFSL QCP ND+ERK ME+IPYASVVGS+MY 
Sbjct: 5   QKAYINKVLERFRMEKCSALPVPIKKGDKFSLTQCPKNDLERKQMEAIPYASVVGSIMYA 64

Query: 221 QTCTRPDISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSD 400
           Q CTRPDISFA GMLGRYQSNPG++HWKAAKKVLRYLQGTK +ML YRRSN LEVIGYSD
Sbjct: 65  QICTRPDISFAAGMLGRYQSNPGMEHWKAAKKVLRYLQGTKCHMLTYRRSNHLEVIGYSD 124

Query: 401 SDFAGCIDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNF 580
           SDFAGC+DSRKST GY+F+LA GAISWKSAKQ+V+ASSTMEAEF+ACFEATIQA WLRNF
Sbjct: 125 SDFAGCVDSRKSTLGYVFILAGGAISWKSAKQTVVASSTMEAEFVACFEATIQANWLRNF 184

Query: 581 VSGLEIVDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHI 760
           +SGL IVD+I+KP+K+YCDNSAAVFFSKNDKYS+GAKHMELKYFAVKEEVQKQRV IEHI
Sbjct: 185 ISGLGIVDSIAKPLKMYCDNSAAVFFSKNDKYSKGAKHMELKYFAVKEEVQKQRVSIEHI 244

Query: 761 KTELMIADPLTKGLQPKTFKEHVQRMGLGCIDD 859
            T LMIADPLTKGL PKTF EHV+ MG+   +D
Sbjct: 245 STNLMIADPLTKGLPPKTFIEHVKNMGIIVTND 277


>gb|KYP61428.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 402

 Score =  441 bits (1133), Expect = e-151
 Identities = 215/273 (78%), Positives = 239/273 (87%)
 Frame = +2

Query: 41  RKTISKKILERFNMDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYL 220
           +K    K+LERF M+KCS   VPIQKGDKFSL QCP ND+ERK ME I YAS VGS++Y 
Sbjct: 129 QKAYINKVLERFRMEKCSASPVPIQKGDKFSLTQCPKNDLERKQMEVISYASFVGSIIYT 188

Query: 221 QTCTRPDISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSD 400
           Q CTRPDISFA  MLGRYQSNPG++HWKAAKKVLRYLQGTK +ML YRRSN LEVIGYSD
Sbjct: 189 QICTRPDISFAARMLGRYQSNPGMEHWKAAKKVLRYLQGTKCHMLTYRRSNHLEVIGYSD 248

Query: 401 SDFAGCIDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNF 580
           SDFAGC+DSRKST GY+F+LA GAISWKSAKQ+V+ASSTMEAEF+ACFEATIQA WLRNF
Sbjct: 249 SDFAGCVDSRKSTLGYVFILAGGAISWKSAKQTVVASSTMEAEFVACFEATIQANWLRNF 308

Query: 581 VSGLEIVDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHI 760
           +SGL IVD+I+KP+K+YCDNSAAVFFSKNDKYS+GAKHMELKYFAVKEEVQKQRV IEHI
Sbjct: 309 ISGLGIVDSIAKPLKMYCDNSAAVFFSKNDKYSKGAKHMELKYFAVKEEVQKQRVSIEHI 368

Query: 761 KTELMIADPLTKGLQPKTFKEHVQRMGLGCIDD 859
            T LMIADPLTKGL PKTF EHV+ MG+   +D
Sbjct: 369 STNLMIADPLTKGLPPKTFIEHVKNMGIIVTND 401


>ref|XP_010559036.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein
           At1g16930-like [Tarenaya hassleriana]
          Length = 679

 Score =  429 bits (1104), Expect = e-142
 Identities = 202/250 (80%), Positives = 228/250 (91%)
 Frame = +2

Query: 80  MDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYLQTCTRPDISFAVG 259
           MDKCS G VPIQKGDKFS +QCP N++ERK ME+IPYASVVGSLMY QTCTRPDISFAVG
Sbjct: 1   MDKCSAGKVPIQKGDKFSNLQCPKNELERKEMENIPYASVVGSLMYAQTCTRPDISFAVG 60

Query: 260 MLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSDSDFAGCIDSRKST 439
           MLGRYQSNPG++HWKAAKKVLRYLQGTKDYML YRRSN LEVIGYSDSD+A C+D+RKS 
Sbjct: 61  MLGRYQSNPGMNHWKAAKKVLRYLQGTKDYMLTYRRSNHLEVIGYSDSDYAVCVDTRKSN 120

Query: 440 FGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNFVSGLEIVDTISKP 619
           FGYLFLLA GA+SW+S KQSVIA+STMEAEF+ACFEAT+ +LW+RNF+SGL IVDTI++P
Sbjct: 121 FGYLFLLAGGAVSWRSGKQSVIAASTMEAEFVACFEATVHSLWMRNFISGLRIVDTIARP 180

Query: 620 MKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHIKTELMIADPLTKG 799
           ++IYCDNSAA+FFSKNDKYS+GAKHME+KY +VKEEVQKQRV  EHI T+ MIADPLTKG
Sbjct: 181 LRIYCDNSAAIFFSKNDKYSKGAKHMEIKYLSVKEEVQKQRVSFEHISTDFMIADPLTKG 240

Query: 800 LQPKTFKEHV 829
           L PKTF  HV
Sbjct: 241 LPPKTFNAHV 250


>gb|KYP46269.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 261

 Score =  413 bits (1061), Expect = e-142
 Identities = 196/260 (75%), Positives = 225/260 (86%)
 Frame = +2

Query: 80  MDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYLQTCTRPDISFAVG 259
           M+KCS   VPIQKGDKFSL QCP ND+ERK ME+IPYASVVGS+MY Q C RPDISFA+G
Sbjct: 1   MEKCSASPVPIQKGDKFSLTQCPKNDLERKKMEAIPYASVVGSIMYAQICVRPDISFAIG 60

Query: 260 MLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSDSDFAGCIDSRKST 439
           MLGRYQ+NPG++HWKAAKK+LRYLQGTK +ML YRRSN LEVIGYS+S+F GC+DSRKS 
Sbjct: 61  MLGRYQNNPGMEHWKAAKKLLRYLQGTKCHMLTYRRSNHLEVIGYSNSNFVGCVDSRKSI 120

Query: 440 FGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNFVSGLEIVDTISKP 619
            GY+F+LA+GAISWKSAKQ V+ASSTMEAEF+ CFEATIQA WLRNF+ GL IVD+I+KP
Sbjct: 121 LGYVFILARGAISWKSAKQIVVASSTMEAEFVVCFEATIQANWLRNFILGLGIVDSIAKP 180

Query: 620 MKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHIKTELMIADPLTKG 799
           +K+YCDN   +FFSKNDKYS+G KH+ELKYF VKEEVQKQRV IEHI T LMI DPLTKG
Sbjct: 181 LKMYCDNFTTIFFSKNDKYSKGTKHIELKYFVVKEEVQKQRVSIEHISTNLMIVDPLTKG 240

Query: 800 LQPKTFKEHVQRMGLGCIDD 859
           L PKTF EHV+ MG+   +D
Sbjct: 241 LPPKTFIEHVKNMGIIVTND 260


>gb|PRQ52817.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 538

 Score =  406 bits (1043), Expect = e-135
 Identities = 189/268 (70%), Positives = 231/268 (86%)
 Frame = +2

Query: 41   RKTISKKILERFNMDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYL 220
            +K   +++LERF M+KCSP + PIQKGDKFSL QCP N++ERK ME IPYAS VGSL+Y 
Sbjct: 267  QKAYIERVLERFGMEKCSPSIAPIQKGDKFSLKQCPQNELERKGMERIPYASAVGSLVYA 326

Query: 221  QTCTRPDISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSD 400
            QTCTRPDISFAVGMLGRYQSNPG+DHWKA KKV+RYLQGTK+YML YRRS+ LEV+GYSD
Sbjct: 327  QTCTRPDISFAVGMLGRYQSNPGMDHWKATKKVMRYLQGTKEYMLTYRRSDNLEVVGYSD 386

Query: 401  SDFAGCIDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNF 580
            SD  GC+D+ KST GYLFLLA GA+SW+SAKQ+ I +STM+AEF+A FEAT  ALWLRNF
Sbjct: 387  SDLGGCLDTGKSTSGYLFLLAGGAVSWRSAKQTCITTSTMQAEFVAVFEATTHALWLRNF 446

Query: 581  VSGLEIVDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHI 760
            +SGL +VD+I++P++I+CDN+A VFFSKND+YS+G+K + L+Y A+KE+VQKQRV I +I
Sbjct: 447  ISGLSVVDSIARPLRIHCDNTAVVFFSKNDRYSQGSKRINLEYLAMKEDVQKQRVSIVNI 506

Query: 761  KTELMIADPLTKGLQPKTFKEHVQRMGL 844
             T+LMIADPLTKGL PK F +H +RMGL
Sbjct: 507  GTKLMIADPLTKGLGPKAFIDHAERMGL 534


>emb|CAN69037.1| hypothetical protein VITISV_026270 [Vitis vinifera]
          Length = 492

 Score =  402 bits (1032), Expect = e-134
 Identities = 187/261 (71%), Positives = 222/261 (85%)
 Frame = +2

Query: 62   ILERFNMDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYLQTCTRPD 241
            +LERFNM  CS G+ PI KGDK S MQCP N++ER+ M+ IPYAS VGSLMY QTCTRPD
Sbjct: 228  VLERFNMQSCSSGIAPILKGDKLSKMQCPRNNMEREQMKKIPYASAVGSLMYAQTCTRPD 287

Query: 242  ISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSDSDFAGCI 421
            ISF VGM GRYQS+PG +HWKAAKKV+RYLQGTKDYML Y+RS  LEV+GYSDSD+ GC+
Sbjct: 288  ISFVVGMFGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYKRSEQLEVVGYSDSDYGGCL 347

Query: 422  DSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNFVSGLEIV 601
            DS KST G++F+LA GAISWKS KQS+ ASSTMEAEF+ACFEA+  ALWLRNF+SGL +V
Sbjct: 348  DSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFVACFEASSHALWLRNFISGLGVV 407

Query: 602  DTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHIKTELMIA 781
            D+I+KP++IYCDN+AAVFFSKN K+S G+KHM+LKY  VKE VQKQ+V IE+I+T LM+ 
Sbjct: 408  DSIAKPLRIYCDNTAAVFFSKNGKFSSGSKHMDLKYLVVKERVQKQQVSIENIRTTLMVG 467

Query: 782  DPLTKGLQPKTFKEHVQRMGL 844
            DPLTKGL PK + E+V RMGL
Sbjct: 468  DPLTKGLPPKAYLENVMRMGL 488


>gb|KYP31265.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 425

 Score =  399 bits (1025), Expect = e-134
 Identities = 181/269 (67%), Positives = 230/269 (85%)
 Frame = +2

Query: 41  RKTISKKILERFNMDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYL 220
           ++T   K+LERFNM  CSP V PI KGDK  L QCP N++ER+ M++IPYAS VGSLMY 
Sbjct: 154 QETYINKVLERFNMKDCSPSVAPIVKGDKLELSQCPKNNLEREHMKNIPYASAVGSLMYA 213

Query: 221 QTCTRPDISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSD 400
           Q CTRPDI+FAVG+LGRYQSNPG+DHWKAAKKV+RYLQGTKD+ML+YRR++ LEVIGYSD
Sbjct: 214 QVCTRPDIAFAVGVLGRYQSNPGVDHWKAAKKVMRYLQGTKDFMLIYRRTDSLEVIGYSD 273

Query: 401 SDFAGCIDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNF 580
           SDFAGCID+RKST GY+F+LA GA+SW S KQ++ A+STMEAEF++CFEAT   +WL++F
Sbjct: 274 SDFAGCIDTRKSTSGYVFMLACGAVSWSSRKQTLTATSTMEAEFVSCFEATSHGVWLKSF 333

Query: 581 VSGLEIVDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHI 760
           +SGL +VD+I+KP+K+YCDNSAAVF +KN+K    +KH+++KY  ++E V++++V IEH+
Sbjct: 334 ISGLRVVDSIAKPLKLYCDNSAAVFMAKNNKSGSRSKHIDIKYLVIRERVKEKKVVIEHV 393

Query: 761 KTELMIADPLTKGLQPKTFKEHVQRMGLG 847
            TELMIADPLTKG+ PK FK+HV RMGLG
Sbjct: 394 STELMIADPLTKGMPPKNFKDHVTRMGLG 422


>emb|CAN63026.1| hypothetical protein VITISV_026313 [Vitis vinifera]
          Length = 345

 Score =  391 bits (1004), Expect = e-132
 Identities = 183/255 (71%), Positives = 216/255 (84%)
 Frame = +2

Query: 80  MDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYLQTCTRPDISFAVG 259
           +  CS G+ PI KGDK S MQCP N+ ER+ M+ IPYAS VGSLMY QTCTRPDISFAV 
Sbjct: 87  LKSCSSGIAPILKGDKLSKMQCPRNNXEREQMKKIPYASAVGSLMYAQTCTRPDISFAVX 146

Query: 260 MLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSDSDFAGCIDSRKST 439
           MLGRYQS+PG +HWKAAKKV+RYLQGTKDYML Y+RS  LEV+GYSD D+ GC+DS KST
Sbjct: 147 MLGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYKRSEQLEVVGYSDXDYGGCLDSLKST 206

Query: 440 FGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNFVSGLEIVDTISKP 619
            G++F+LA GAISWKS KQS+ ASSTMEAEF+ACFEA+  ALWLRNF+SGL +VD+I+KP
Sbjct: 207 SGFVFMLANGAISWKSEKQSITASSTMEAEFVACFEASSHALWLRNFISGLGVVDSIAKP 266

Query: 620 MKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHIKTELMIADPLTKG 799
           ++IYCDN+AAVFFSKN K+S G+KHM+LKY  VKE VQKQ+V IE+I+T LM+ADPLTKG
Sbjct: 267 LRIYCDNTAAVFFSKNGKFSSGSKHMDLKYLVVKERVQKQQVSIENIRTTLMVADPLTKG 326

Query: 800 LQPKTFKEHVQRMGL 844
           L PK + EHV RMGL
Sbjct: 327 LPPKAYLEHVMRMGL 341


>gb|PKU59787.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 216

 Score =  378 bits (970), Expect = e-129
 Identities = 181/211 (85%), Positives = 197/211 (93%)
 Frame = +2

Query: 212 MYLQTCTRPDISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIG 391
           MY QTCTRPDISFAVGMLGRYQSNPG+DHWKAAKKVLRYLQGTK+YML +RRS+ LEVIG
Sbjct: 1   MYAQTCTRPDISFAVGMLGRYQSNPGLDHWKAAKKVLRYLQGTKEYMLTFRRSDHLEVIG 60

Query: 392 YSDSDFAGCIDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWL 571
           YSDSDFAGC+DSRKSTFGY+FLL+ GAISWKSAKQSVIA+STMEAEF+ACFEATIQ LWL
Sbjct: 61  YSDSDFAGCLDSRKSTFGYVFLLSGGAISWKSAKQSVIAASTMEAEFVACFEATIQGLWL 120

Query: 572 RNFVSGLEIVDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCI 751
           RNF+SGL +VD+I+KP+KIYCDNSAAVFFSKNDKYS+GAKHMELKYFAVKEEVQKQRV  
Sbjct: 121 RNFISGLGVVDSIAKPLKIYCDNSAAVFFSKNDKYSKGAKHMELKYFAVKEEVQKQRVSF 180

Query: 752 EHIKTELMIADPLTKGLQPKTFKEHVQRMGL 844
           EHI T  MIADPLTKGL PKTF EHV RMG+
Sbjct: 181 EHISTNFMIADPLTKGLPPKTFHEHVVRMGI 211


>gb|KYP64910.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 371

 Score =  384 bits (985), Expect = e-129
 Identities = 183/227 (80%), Positives = 204/227 (89%)
 Frame = +2

Query: 41  RKTISKKILERFNMDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYL 220
           +K    KILERF MDKCS   VPIQKGDKFSLMQCP ND+ERK ME IPYAS+VGSLMY 
Sbjct: 141 QKAYINKILERFRMDKCSASPVPIQKGDKFSLMQCPKNDLERKQMEEIPYASIVGSLMYT 200

Query: 221 QTCTRPDISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSD 400
           QTCTRPDISFAVGMLGRYQSNP IDHWKAAKKV+RYLQGTK++ML YRRS+ LEVIGYSD
Sbjct: 201 QTCTRPDISFAVGMLGRYQSNPDIDHWKAAKKVMRYLQGTKEHMLTYRRSDHLEVIGYSD 260

Query: 401 SDFAGCIDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNF 580
           SDFAGC+D+RKSTF YLF+LA GAISWKSAKQSVIA+STMEAEF+ACFEA +QA WLRNF
Sbjct: 261 SDFAGCVDTRKSTFDYLFMLAGGAISWKSAKQSVIAASTMEAEFVACFEAMVQAKWLRNF 320

Query: 581 VSGLEIVDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVK 721
           +S L +VD+I+KP+KIYCDNSA VFFS+NDKYS+GAKHMELKYF V+
Sbjct: 321 ISRLGVVDSIAKPLKIYCDNSATVFFSRNDKYSKGAKHMELKYFTVE 367


>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score =  401 bits (1030), Expect = e-125
 Identities = 185/269 (68%), Positives = 231/269 (85%)
 Frame = +2

Query: 41   RKTISKKILERFNMDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYL 220
            ++T   KILERF M  CSP V PI KGD+F+L QCP ND ER+ M++IPYASVVGSLMY 
Sbjct: 1050 QETYINKILERFRMKDCSPSVAPIVKGDRFNLNQCPKNDFEREQMKNIPYASVVGSLMYA 1109

Query: 221  QTCTRPDISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSD 400
            Q CTRPDI+FAVGMLGRYQSNPGIDHW+AAKKVLRYLQGTKDYMLMYR+++ L+ IGYSD
Sbjct: 1110 QVCTRPDIAFAVGMLGRYQSNPGIDHWRAAKKVLRYLQGTKDYMLMYRQTDNLDAIGYSD 1169

Query: 401  SDFAGCIDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNF 580
            SDFAGC+DSR+ST GY+F++A GAISW S KQS+ A+STMEAEF++CFEAT   +WL++F
Sbjct: 1170 SDFAGCVDSRRSTSGYIFMMAGGAISWGSVKQSLAATSTMEAEFVSCFEATSHGVWLKSF 1229

Query: 581  VSGLEIVDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHI 760
            +SGL+I+DTIS+P++I+CDNSAAVF +KN+K    +KH+++KY A++E V+ ++V IEHI
Sbjct: 1230 ISGLKIIDTISRPLRIFCDNSAAVFMAKNNKSGSRSKHIDIKYLAIRERVKDKKVVIEHI 1289

Query: 761  KTELMIADPLTKGLQPKTFKEHVQRMGLG 847
             TELMIADPLTKG+ P  FK+HV+RMGLG
Sbjct: 1290 STELMIADPLTKGMPPFKFKDHVERMGLG 1318


>emb|CAN68275.1| hypothetical protein VITISV_026802 [Vitis vinifera]
          Length = 982

 Score =  394 bits (1011), Expect = e-125
 Identities = 183/264 (69%), Positives = 221/264 (83%)
 Frame = +2

Query: 53   SKKILERFNMDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYLQTCT 232
            S+ +LERFNM  CS  + PI KGDK S MQCP N++ER+ M+ IPYAS VGSLMY QTCT
Sbjct: 715  SRGVLERFNMQSCSSSIAPILKGDKLSKMQCPRNNMEREQMKKIPYASAVGSLMYAQTCT 774

Query: 233  RPDISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSDSDFA 412
            RPDISFA+GML RYQS+PG +HWKA KKV+RYLQGTKDYML Y+RS  LEV+GYSDSD+ 
Sbjct: 775  RPDISFAIGMLRRYQSDPGFEHWKATKKVMRYLQGTKDYMLTYKRSEQLEVVGYSDSDYG 834

Query: 413  GCIDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNFVSGL 592
            GC+DS KST G++F+LA GAI WKS KQS+ ASSTMEAEF+ACFEA+  ALWLRNF+SGL
Sbjct: 835  GCLDSLKSTSGFVFMLANGAILWKSKKQSITASSTMEAEFVACFEASSHALWLRNFISGL 894

Query: 593  EIVDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHIKTEL 772
             +V++I+KP++IYCDN+AAVFFSKN K+S G+KHM+LKY  VKE VQKQ+V IE+I+  L
Sbjct: 895  GVVNSIAKPLRIYCDNTAAVFFSKNGKFSSGSKHMDLKYLVVKERVQKQQVSIENIRATL 954

Query: 773  MIADPLTKGLQPKTFKEHVQRMGL 844
            ++ DPLTKGL PK + EHV RMGL
Sbjct: 955  VVIDPLTKGLPPKAYLEHVMRMGL 978


>emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]
          Length = 2026

 Score =  399 bits (1024), Expect = e-122
 Identities = 184/262 (70%), Positives = 221/262 (84%)
 Frame = +2

Query: 59   KILERFNMDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYLQTCTRP 238
            ++LERFNM  CS G+ PI KGDK S MQCP N+ ER+ M+ IPYAS VGSLMY QTCTRP
Sbjct: 848  RVLERFNMQSCSSGIAPILKGDKLSKMQCPRNNXEREQMKKIPYASXVGSLMYAQTCTRP 907

Query: 239  DISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSDSDFAGC 418
            DISFAVGMLGRYQS+PG +HWK AKKV+RYLQGTKDYML Y+RS  LEV+GYS+SD+ GC
Sbjct: 908  DISFAVGMLGRYQSDPGFEHWKXAKKVMRYLQGTKDYMLTYKRSEQLEVVGYSBSDYGGC 967

Query: 419  IDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNFVSGLEI 598
            ++S KST G++F+LA GAISWKS KQS+ ASSTMEAEF+ACFEA+   LWL+NF+SGL +
Sbjct: 968  LBSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFVACFEASSHVLWLQNFISGLGV 1027

Query: 599  VDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHIKTELMI 778
            VD I+KP++IYCDN+A VFFSKN K+S G+KHM+LKY  VKE VQKQ++ IE+I+T LM+
Sbjct: 1028 VDPIAKPLRIYCDNTATVFFSKNGKFSSGSKHMDLKYLVVKERVQKQQMSIENIRTTLMV 1087

Query: 779  ADPLTKGLQPKTFKEHVQRMGL 844
            ADPLTKGL PK + EHV RMGL
Sbjct: 1088 ADPLTKGLPPKAYLEHVMRMGL 1109


>emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]
          Length = 745

 Score =  371 bits (952), Expect = e-119
 Identities = 173/268 (64%), Positives = 217/268 (80%)
 Frame = +2

Query: 41   RKTISKKILERFNMDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYL 220
            ++T   K+LERF M  CS  V PI K ++F+L QCP ND+ER+ M++IPYAS VGSLMY 
Sbjct: 435  QETYINKVLERFWMKNCSLSVSPIVKSNRFNLDQCPKNDLEREQMKNIPYASAVGSLMYA 494

Query: 221  QTCTRPDISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSD 400
            Q CTRPDI+FAVGMLGRYQSNPG DHWKAAKKV+RYLQGTKDY LMYRR++ LEV+GYSD
Sbjct: 495  QVCTRPDIAFAVGMLGRYQSNPGKDHWKAAKKVMRYLQGTKDYKLMYRRTSNLEVVGYSD 554

Query: 401  SDFAGCIDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNF 580
            SDFAGC+DSRKST GY+F+LA GAISW+S KQ++ A+STMEAEFI+CFE T   +WL +F
Sbjct: 555  SDFAGCVDSRKSTSGYIFILAGGAISWRSVKQTMTATSTMEAEFISCFETTSHGVWLTSF 614

Query: 581  VSGLEIVDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHI 760
            + GL ++D+IS+ + IYCDNS  VF +KN+K    +KH+++KY A+ E V++++V IEHI
Sbjct: 615  IFGLRVMDSISRSLSIYCDNSVVVFMAKNNKTGSRSKHIDIKYLAISERVKEKKVVIEHI 674

Query: 761  KTELMIADPLTKGLQPKTFKEHVQRMGL 844
             TELMI DPLTKG+ P  FK+HV  MGL
Sbjct: 675  STELMIVDPLTKGMPPLKFKDHVVNMGL 702


>emb|CAN71425.1| hypothetical protein VITISV_002520 [Vitis vinifera]
          Length = 480

 Score =  361 bits (926), Expect = e-118
 Identities = 172/271 (63%), Positives = 216/271 (79%)
 Frame = +2

Query: 41  RKTISKKILERFNMDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYL 220
           ++T   K+LERF M  CSP V PI KGD             R+ M++I YASVV SLMY 
Sbjct: 222 QETYINKVLERFRMKNCSPSVSPIVKGD-------------REQMKNISYASVVESLMYA 268

Query: 221 QTCTRPDISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSD 400
           Q CTRPDI+FAVGMLGRYQSNPGIDHWKAAKKV+RYLQGTKDY LMYRR++ LEV+GYSD
Sbjct: 269 QVCTRPDIAFAVGMLGRYQSNPGIDHWKAAKKVMRYLQGTKDYKLMYRRTSNLEVVGYSD 328

Query: 401 SDFAGCIDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNF 580
           SDFAGC+DS KST GY+F+LA GAISW+S KQ++ A+STMEAEFI+CFEAT   +WL++F
Sbjct: 329 SDFAGCVDSHKSTSGYIFILAGGAISWRSVKQTMTATSTMEAEFISCFEATSHGVWLKSF 388

Query: 581 VSGLEIVDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHI 760
           +SGL ++D+IS+P+ IYCDNSAAVF +KN+K    +KH+++KY A+++ V++++V IEHI
Sbjct: 389 ISGLRVMDSISRPLSIYCDNSAAVFMAKNNKSGSRSKHIDIKYLAIRKRVKEKKVVIEHI 448

Query: 761 KTELMIADPLTKGLQPKTFKEHVQRMGLGCI 853
            TELMIADPLTKG+ P  FK+HV  MGL  +
Sbjct: 449 STELMIADPLTKGMPPLKFKDHVVNMGLSSL 479


>gb|PKU63193.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 216

 Score =  350 bits (899), Expect = e-118
 Identities = 167/211 (79%), Positives = 190/211 (90%)
 Frame = +2

Query: 212 MYLQTCTRPDISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIG 391
           MY QTCTRPDISF VG+LGRYQ+N  +DHWKAAKKVLRYLQGTK+YML +RRS+ LEVIG
Sbjct: 1   MYAQTCTRPDISFVVGILGRYQNNLRLDHWKAAKKVLRYLQGTKEYMLNFRRSDHLEVIG 60

Query: 392 YSDSDFAGCIDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWL 571
           YS+ DFAGC+DSRKSTFGY+FLL+ GAISWKSAKQS+IA+STMEAEF+ACF+ATIQ LWL
Sbjct: 61  YSNLDFAGCLDSRKSTFGYVFLLSGGAISWKSAKQSIIAASTMEAEFVACFDATIQGLWL 120

Query: 572 RNFVSGLEIVDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCI 751
           RNF+ GL +VD+ISKP+KIYCDN AAVFFSKN+KYS+G KH+ELKYFAVKEEVQKQRV  
Sbjct: 121 RNFILGLGVVDSISKPLKIYCDNYAAVFFSKNNKYSKGVKHIELKYFAVKEEVQKQRVSF 180

Query: 752 EHIKTELMIADPLTKGLQPKTFKEHVQRMGL 844
           +HI T  MIADPLTKGL PKTF EHV RMG+
Sbjct: 181 KHISTNFMIADPLTKGLPPKTFHEHVVRMGI 211


>gb|KYP64870.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
 gb|KYP73943.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 384

 Score =  354 bits (909), Expect = e-117
 Identities = 163/262 (62%), Positives = 207/262 (79%)
 Frame = +2

Query: 59  KILERFNMDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYLQTCTRP 238
           K+L+RF M    PG  PI KGDKFSL QCPNND+ER  M+ IPYAS VGSLMY Q CTRP
Sbjct: 116 KVLDRFGMKDSKPGDTPIAKGDKFSLKQCPNNDLERNEMQKIPYASAVGSLMYAQVCTRP 175

Query: 239 DISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSDSDFAGC 418
           DI+F VG+LGRY SNPG+ HWKA K+V+RYL+ TK YML Y++S+ LE+IGYSDSDFAGC
Sbjct: 176 DIAFIVGVLGRYLSNPGMQHWKAVKRVMRYLKRTKGYMLTYQKSDSLEIIGYSDSDFAGC 235

Query: 419 IDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNFVSGLEI 598
            DS++ST GY+F+LA GAISWKS KQ++IASSTM AEFIACFEA+   +WLRNF++ L +
Sbjct: 236 QDSKRSTSGYIFMLAGGAISWKSVKQTIIASSTMAAEFIACFEASNHGIWLRNFITNLRV 295

Query: 599 VDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHIKTELMI 778
           V+ I +P+KIYCDN++AV +S N++ +  +K +++K+  VKE VQ +++ IEHI T  M+
Sbjct: 296 VNGIERPLKIYCDNNSAVLYSNNNRSTTKSKFIDIKFLVVKERVQNKQISIEHIGTNFML 355

Query: 779 ADPLTKGLQPKTFKEHVQRMGL 844
           ADPLTKGL PK F EH   MG+
Sbjct: 356 ADPLTKGLVPKVFHEHTAHMGV 377


>emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera]
          Length = 1181

 Score =  371 bits (953), Expect = e-115
 Identities = 174/273 (63%), Positives = 214/273 (78%)
 Frame = +2

Query: 41   RKTISKKILERFNMDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYL 220
            +K    K+L RF M  C+PG  P+ KGDKFSL QCP N++E+K ME  PYAS VGSLMY 
Sbjct: 906  QKAYIDKVLSRFGMSNCAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAVGSLMYA 965

Query: 221  QTCTRPDISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSD 400
            Q CTRPDI++ VGMLGRY SNPG+DHWK AK+V+RYLQ TKDYML YRRS+ LE++GYSD
Sbjct: 966  QVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYRRSSHLEIVGYSD 1025

Query: 401  SDFAGCIDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNF 580
            SDFAGC+DSR+ST GY+F+LA GA+SWKS KQ+++ASSTMEAEFIAC+EA+   +WLRNF
Sbjct: 1026 SDFAGCLDSRRSTSGYIFMLAGGAVSWKSVKQTLVASSTMEAEFIACYEASNHGIWLRNF 1085

Query: 581  VSGLEIVDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHI 760
            V+ L IVD I KP++I CDN A   +SKN++ S  +KH+++K+  VKE VQ  +V IEHI
Sbjct: 1086 VTQLXIVDGIEKPLRINCDNKAXELYSKNNRSSSKSKHIDIKFLVVKERVQSLQVSIEHI 1145

Query: 761  KTELMIADPLTKGLQPKTFKEHVQRMGLGCIDD 859
             T  MIADPLTKGL PK + EHV  MG+  IDD
Sbjct: 1146 STNSMIADPLTKGLPPKVYHEHVTHMGVVHIDD 1178


>gb|KYP68427.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 216

 Score =  342 bits (878), Expect = e-115
 Identities = 170/216 (78%), Positives = 189/216 (87%)
 Frame = +2

Query: 212 MYLQTCTRPDISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIG 391
           MY Q CTRP+ISF  GMLGRYQSNPG++HWKAAKKVLRYLQGTK +ML YRRSN LEVIG
Sbjct: 1   MYAQICTRPNISFVAGMLGRYQSNPGMEHWKAAKKVLRYLQGTKCHMLTYRRSNHLEVIG 60

Query: 392 YSDSDFAGCIDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWL 571
           YSDSDFA C+DSRKST GY+FLLA+GAISWKS KQ V+AS TM+AEF+ACFEATIQA WL
Sbjct: 61  YSDSDFAECVDSRKSTLGYVFLLARGAISWKSEKQIVVASLTMKAEFVACFEATIQANWL 120

Query: 572 RNFVSGLEIVDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCI 751
           RNF+SGL IVD+ +KP+K+YCDNSAAVFFSKNDKYS+GAK MELKYFAVKEEVQKQRV I
Sbjct: 121 RNFISGLGIVDS-AKPLKMYCDNSAAVFFSKNDKYSKGAKRMELKYFAVKEEVQKQRVSI 179

Query: 752 EHIKTELMIADPLTKGLQPKTFKEHVQRMGLGCIDD 859
           EHI T LMIAD LTKGL PKTF EHV+ M +   +D
Sbjct: 180 EHISTNLMIADLLTKGLLPKTFIEHVKNMSIIVTND 215


>emb|CAN61426.1| hypothetical protein VITISV_037642 [Vitis vinifera]
          Length = 355

 Score =  346 bits (888), Expect = e-114
 Identities = 162/263 (61%), Positives = 210/263 (79%)
 Frame = +2

Query: 56  KKILERFNMDKCSPGVVPIQKGDKFSLMQCPNNDVERKVMESIPYASVVGSLMYLQTCTR 235
           ++IL+RFNM  C     PI KGDKFS  QCP ND ER+ M++IPY+SVVGSLMY Q CT 
Sbjct: 90  ERILKRFNMHNCKSTKAPIVKGDKFSKAQCPQNDDEREEMKTIPYSSVVGSLMYAQVCTC 149

Query: 236 PDISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDYMLMYRRSNPLEVIGYSDSDFAG 415
           PDI+F VGMLGRY SNPG  HWKAAKKVLRYLQGTKD ML Y+R++ L+V+G+ D+DFAG
Sbjct: 150 PDIAFVVGMLGRYLSNPGSQHWKAAKKVLRYLQGTKDLMLTYQRTSLLDVVGFCDADFAG 209

Query: 416 CIDSRKSTFGYLFLLAQGAISWKSAKQSVIASSTMEAEFIACFEATIQALWLRNFVSGLE 595
           CID +KST GY+F++A GA+SWKS KQ++ ASSTMEAE++AC+EA   A+W+RNFV  L 
Sbjct: 210 CIDDKKSTTGYIFMMAGGAVSWKSVKQTLTASSTMEAEYVACYEACCHAMWMRNFVLALG 269

Query: 596 IVDTISKPMKIYCDNSAAVFFSKNDKYSRGAKHMELKYFAVKEEVQKQRVCIEHIKTELM 775
           +VD+IS+P+K++CDNSAAV FSKN +    +KH+++K++ VKE+V +  + IEH+ T+ M
Sbjct: 270 VVDSISRPLKLFCDNSAAVAFSKNTRSISRSKHIDVKFYFVKEKVAESLIDIEHMSTKSM 329

Query: 776 IADPLTKGLQPKTFKEHVQRMGL 844
           +ADPLTKGL    F+EHV +MGL
Sbjct: 330 LADPLTKGLPIIAFQEHVSQMGL 352