BLASTX nr result

ID: Cheilocostus21_contig00056049 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00056049
         (450 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018675665.1| PREDICTED: protein NLP1-like isoform X3 [Mus...    60   1e-07
ref|XP_009384610.1| PREDICTED: protein NLP1-like isoform X1 [Mus...    60   1e-07
ref|XP_009401874.1| PREDICTED: protein NLP1-like isoform X2 [Mus...    60   2e-07
ref|XP_009401873.1| PREDICTED: protein NLP1-like isoform X1 [Mus...    60   2e-07

>ref|XP_018675665.1| PREDICTED: protein NLP1-like isoform X3 [Musa acuminata subsp.
           malaccensis]
          Length = 771

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/75 (52%), Positives = 45/75 (60%), Gaps = 10/75 (13%)
 Frame = -2

Query: 254 SGSVFDCPEFLQTSTCPSSG------LSAVIGARSCSTNTVPLPTIDYQVDGERPVFSM- 96
           SGSVFDC + LQT T  S+G       S V+G  S S+N   L  IDYQVD ER VFS+ 
Sbjct: 32  SGSVFDCSDLLQTGTSASTGPLSSACFSPVLGISSTSSNPT-LAGIDYQVDAERSVFSVE 90

Query: 95  ---DGMQMEMLDVGQ 60
              D  QM+MLD GQ
Sbjct: 91  LASDEAQMQMLDGGQ 105


>ref|XP_009384610.1| PREDICTED: protein NLP1-like isoform X1 [Musa acuminata subsp.
           malaccensis]
 ref|XP_018675663.1| PREDICTED: protein NLP1-like isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 930

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/75 (52%), Positives = 45/75 (60%), Gaps = 10/75 (13%)
 Frame = -2

Query: 254 SGSVFDCPEFLQTSTCPSSG------LSAVIGARSCSTNTVPLPTIDYQVDGERPVFSM- 96
           SGSVFDC + LQT T  S+G       S V+G  S S+N   L  IDYQVD ER VFS+ 
Sbjct: 32  SGSVFDCSDLLQTGTSASTGPLSSACFSPVLGISSTSSNPT-LAGIDYQVDAERSVFSVE 90

Query: 95  ---DGMQMEMLDVGQ 60
              D  QM+MLD GQ
Sbjct: 91  LASDEAQMQMLDGGQ 105


>ref|XP_009401874.1| PREDICTED: protein NLP1-like isoform X2 [Musa acuminata subsp.
           malaccensis]
          Length = 864

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/75 (50%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
 Frame = -2

Query: 254 SGSVFDCPEFLQTSTCPSSGLSAVIGARSCSTNTVPLPTIDYQVDGERPVFSMDG----M 87
           SGSVFDC + LQT T  S+ L  V+G    S N   LP IDYQVD ER +FS++      
Sbjct: 24  SGSVFDCCDLLQTGT--SAFLLPVLGVSYSSPNPT-LPGIDYQVDAERSIFSVESASEET 80

Query: 86  QMEMLDVGQSINLNP 42
           Q++MLD GQSI  +P
Sbjct: 81  QIQMLDGGQSIYPSP 95


>ref|XP_009401873.1| PREDICTED: protein NLP1-like isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 894

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/75 (50%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
 Frame = -2

Query: 254 SGSVFDCPEFLQTSTCPSSGLSAVIGARSCSTNTVPLPTIDYQVDGERPVFSMDG----M 87
           SGSVFDC + LQT T  S+ L  V+G    S N   LP IDYQVD ER +FS++      
Sbjct: 24  SGSVFDCCDLLQTGT--SAFLLPVLGVSYSSPNPT-LPGIDYQVDAERSIFSVESASEET 80

Query: 86  QMEMLDVGQSINLNP 42
           Q++MLD GQSI  +P
Sbjct: 81  QIQMLDGGQSIYPSP 95


Top