BLASTX nr result

ID: Cheilocostus21_contig00055910 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00055910
         (495 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018680511.1| PREDICTED: protein CHUP1, chloroplastic-like...    62   4e-08
ref|XP_009395793.1| PREDICTED: protein CHUP1, chloroplastic-like...    62   4e-08
ref|XP_018684230.1| PREDICTED: protein CHUP1, chloroplastic-like...    58   1e-06
ref|XP_009410777.1| PREDICTED: protein CHUP1, chloroplastic-like...    58   1e-06
ref|XP_018684227.1| PREDICTED: protein CHUP1, chloroplastic-like...    58   1e-06

>ref|XP_018680511.1| PREDICTED: protein CHUP1, chloroplastic-like isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 405

 Score = 62.0 bits (149), Expect = 4e-08
 Identities = 50/179 (27%), Positives = 70/179 (39%), Gaps = 19/179 (10%)
 Frame = -1

Query: 483 DDDLETRRKRRSVGPCGCSEGIKDGLAVLLNVRCSNLCSAFCFSVQPVDE*LCLNYEPYD 304
           +D+  T R+     P GC   +KDGL +L N                             
Sbjct: 45  NDESATGRRSIDAAPIGCGRDLKDGLLILQN----------------------------- 75

Query: 303 LT*PVKDKAATNIIHGXXXXXXXXXXXXXXXXSNNGS---------MQEVKHQ------L 169
                 ++A  N++HG                  +           +Q VK +       
Sbjct: 76  ------EEAIVNVVHGTSAAPATITAVTNNFTEQSPENLVDEDGLLLQVVKQEPERAGPR 129

Query: 168 NSTSIKLENSEVKVDEEICRLGDMVQALCDRNRRLE----TYYGLKEQEDSLRELENQL 4
           NST  K E  +VK D EI  L D+VQ+LCDR R L+     YYG KEQ+ ++RELE +L
Sbjct: 130 NSTGDKFEGKKVKTDAEIVYLRDLVQSLCDRIRSLDIQMLEYYGSKEQDAAIRELEGEL 188


>ref|XP_009395793.1| PREDICTED: protein CHUP1, chloroplastic-like isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 406

 Score = 62.0 bits (149), Expect = 4e-08
 Identities = 50/179 (27%), Positives = 70/179 (39%), Gaps = 19/179 (10%)
 Frame = -1

Query: 483 DDDLETRRKRRSVGPCGCSEGIKDGLAVLLNVRCSNLCSAFCFSVQPVDE*LCLNYEPYD 304
           +D+  T R+     P GC   +KDGL +L N                             
Sbjct: 46  NDESATGRRSIDAAPIGCGRDLKDGLLILQN----------------------------- 76

Query: 303 LT*PVKDKAATNIIHGXXXXXXXXXXXXXXXXSNNGS---------MQEVKHQ------L 169
                 ++A  N++HG                  +           +Q VK +       
Sbjct: 77  ------EEAIVNVVHGTSAAPATITAVTNNFTEQSPENLVDEDGLLLQVVKQEPERAGPR 130

Query: 168 NSTSIKLENSEVKVDEEICRLGDMVQALCDRNRRLE----TYYGLKEQEDSLRELENQL 4
           NST  K E  +VK D EI  L D+VQ+LCDR R L+     YYG KEQ+ ++RELE +L
Sbjct: 131 NSTGDKFEGKKVKTDAEIVYLRDLVQSLCDRIRSLDIQMLEYYGSKEQDAAIRELEGEL 189


>ref|XP_018684230.1| PREDICTED: protein CHUP1, chloroplastic-like isoform X3 [Musa
           acuminata subsp. malaccensis]
 ref|XP_018684231.1| PREDICTED: protein CHUP1, chloroplastic-like isoform X3 [Musa
           acuminata subsp. malaccensis]
          Length = 563

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 11/74 (14%)
 Frame = -1

Query: 192 MQEVKHQLNST------SIKLENSEVKVDEEICRLGDMVQALCDRNRRLE----TYYGLK 43
           +QE + +  S+      SI+LEN + K+D EI  L ++ QAL DRNR LE     YYGLK
Sbjct: 61  LQEAEQESESSCPKKPVSIELENEKAKMDAEIVYLSNLAQALWDRNRSLEMEMLEYYGLK 120

Query: 42  E-QEDSLRELENQL 4
           E QE +++ELENQL
Sbjct: 121 ELQEAAVKELENQL 134


>ref|XP_009410777.1| PREDICTED: protein CHUP1, chloroplastic-like isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 624

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 11/74 (14%)
 Frame = -1

Query: 192 MQEVKHQLNST------SIKLENSEVKVDEEICRLGDMVQALCDRNRRLE----TYYGLK 43
           +QE + +  S+      SI+LEN + K+D EI  L ++ QAL DRNR LE     YYGLK
Sbjct: 122 LQEAEQESESSCPKKPVSIELENEKAKMDAEIVYLSNLAQALWDRNRSLEMEMLEYYGLK 181

Query: 42  E-QEDSLRELENQL 4
           E QE +++ELENQL
Sbjct: 182 ELQEAAVKELENQL 195


>ref|XP_018684227.1| PREDICTED: protein CHUP1, chloroplastic-like isoform X1 [Musa
           acuminata subsp. malaccensis]
 ref|XP_018684228.1| PREDICTED: protein CHUP1, chloroplastic-like isoform X1 [Musa
           acuminata subsp. malaccensis]
 ref|XP_018684229.1| PREDICTED: protein CHUP1, chloroplastic-like isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 625

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 11/74 (14%)
 Frame = -1

Query: 192 MQEVKHQLNST------SIKLENSEVKVDEEICRLGDMVQALCDRNRRLE----TYYGLK 43
           +QE + +  S+      SI+LEN + K+D EI  L ++ QAL DRNR LE     YYGLK
Sbjct: 123 LQEAEQESESSCPKKPVSIELENEKAKMDAEIVYLSNLAQALWDRNRSLEMEMLEYYGLK 182

Query: 42  E-QEDSLRELENQL 4
           E QE +++ELENQL
Sbjct: 183 ELQEAAVKELENQL 196


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