BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00055740
         (1364 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN88207.1| integrase core domain containing protein [Phaseol...    52   2e-08
gb|KYP42175.1| Retrovirus-related Pol polyprotein from transposo...    53   5e-08
gb|KYP58728.1| Retrovirus-related Pol polyprotein from transposo...    50   5e-07
gb|PNY03792.1| ubiquitin carboxyl-terminal hydrolase 12-like pro...    52   5e-07
gb|KYP40247.1| Retrovirus-related Pol polyprotein from transposo...    51   5e-07
gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposo...    49   7e-07
gb|KYP74314.1| Retrovirus-related Pol polyprotein from transposo...    49   8e-07
gb|AAO26688.1|AF478375_1 gag-pol polyprotein, partial [Vitis vin...    42   9e-07
gb|AAO26689.1|AF478376_1 gag-pol polyprotein, partial [Vitis vin...    42   9e-07
gb|AAO26687.1|AF478374_1 gag-pol polyprotein, partial [Vitis vin...    42   9e-07
gb|KYP71533.1| Retrovirus-related Pol polyprotein from transposo...    47   2e-06
gb|OTG33444.1| putative ribonuclease H-like domain-containing pr...    39   4e-06
gb|KYP40188.1| Retrovirus-related Pol polyprotein from transposo...    34   4e-06
ref|XP_019058682.1| PREDICTED: uncharacterized protein LOC109116...    40   6e-06
gb|KYP52255.1| Retrovirus-related Pol polyprotein from transposo...    35   7e-06
gb|KYP45441.1| Retrovirus-related Pol polyprotein from transposo...    36   8e-06
gb|KYP55750.1| Retrovirus-related Pol polyprotein from transposo...    38   8e-06

>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score = 51.6 bits (122), Expect(2) = 2e-08
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
 Frame = +2

Query: 875  LGHSSPTLIKRFLSYLS-IPRFICDVC*LGK*RQVSCPSTYS-RCNSPCEVNTHSNTCGM 1048
            LGH S   +++ +  LS +    C+ C  GK  + S PS+ S R +SP  +  HS+  G 
Sbjct: 487  LGHPSLAKMQQLVPSLSNVSSLSCESCQFGKHIRSSFPSSVSQRASSPFAL-VHSDIWGP 545

Query: 1049 SHIFF*IGV*ILYYFC**LSSYVMDIPPEK*SLAFDVFEIFGREIKSKFGASIKILRANN 1228
            S I   +G      F    S        +  S  F +F++F  EIK++FG SI+ILR++N
Sbjct: 546  SRIKSNLGFQYFVTFIDDYSRCTWVFLMKNRSELFSIFQLFYNEIKNQFGISIRILRSDN 605

Query: 1229 VKDIHIHRF 1255
             ++   H F
Sbjct: 606  GREYLSHSF 614



 Score = 37.4 bits (85), Expect(2) = 2e-08
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = +1

Query: 1270 AHGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            +HGI++QT+C YT   N V E KNRHL+
Sbjct: 620  SHGILHQTSCAYTPQQNGVAERKNRHLV 647


>gb|KYP42175.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 304

 Score = 53.1 bits (126), Expect(2) = 5e-08
 Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
 Frame = +2

Query: 875  LGHSSPTLIKRFLSYLS-IPRFICDVC*LGK*RQVSCP-STYSRCNSPCEVNTHSNTCGM 1048
            LGH S   +K+ + +LS +    C+ C LGK  + S P S  SR  SP +V  HS+  G+
Sbjct: 132  LGHPSLNKLKKMVPHLSRLESLECESCQLGKHVRTSFPKSINSRAVSPFDV-IHSDVWGL 190

Query: 1049 SHIFF*IGV*ILYYFC**LSSYVMDIPPEK*SLAFDVFEIFGREIKSKFGASIKILRANN 1228
            S +   +G      F    S        +  S  F++F+ F  EIK++FG  I+ILR++N
Sbjct: 191  SRVPSLLGYRYYVTFIDEFSRCTWIFLMKNRSELFNIFQSFYSEIKTQFGKVIRILRSDN 250

Query: 1229 VKD 1237
             K+
Sbjct: 251  AKE 253



 Score = 34.3 bits (77), Expect(2) = 5e-08
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 1270 AHGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            +HGI++Q++CP+T   N V E K+RH++
Sbjct: 265  SHGILHQSSCPHTPQQNGVAERKHRHIV 292


>gb|KYP58728.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1402

 Score = 49.7 bits (117), Expect(2) = 5e-07
 Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
 Frame = +2

Query: 875  LGHSSPTLIKRFLSYLS-IPRFICDVC*LGK*RQVSCPSTY-SRCNSPCEVNTHSNTCGM 1048
            LGH S   +K+ + +LS +    C+ C LGK  + S P++  SR  SP +V  HS+  G 
Sbjct: 475  LGHPSLNKLKKMVPHLSRLESLECESCQLGKHVRASFPNSINSRAMSPFDV-IHSDVWGP 533

Query: 1049 SHIFF*IGV*ILYYFC**LSSYVMDIPPEK*SLAFDVFEIFGREIKSKFGASIKILRANN 1228
            S I   +G      F    S        +  S  F++F  F  EIK++FG  I+ILR++N
Sbjct: 534  SRIPSLLGHRYYVTFIDDFSRCTWIFLMKNRSELFNIFLSFYSEIKTQFGKVIRILRSDN 593

Query: 1229 VKD 1237
             K+
Sbjct: 594  AKE 596



 Score = 34.3 bits (77), Expect(2) = 5e-07
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 1270 AHGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            +HGI++Q++CP+T   N V E K+RH++
Sbjct: 608  SHGILHQSSCPHTPQQNGVAERKHRHIV 635


>gb|PNY03792.1| ubiquitin carboxyl-terminal hydrolase 12-like protein [Trifolium
            pratense]
          Length = 747

 Score = 52.4 bits (124), Expect(2) = 5e-07
 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
 Frame = +2

Query: 875  LGHSSPTLIKRFLSYLS-IPRFICDVC*LGK*RQVSCPSTYSRCNSPCEVNTHSNTCGMS 1051
            LGH S    K  +  LS +    C+ C LGK  QVS PS+ ++ +       HS+  G S
Sbjct: 62   LGHPSLDKSKLLVPQLSHLKTLDCESCLLGKHVQVSFPSSANKRSMSSFDTVHSDIWGPS 121

Query: 1052 HIFF*IGV*ILYYFC**LSSYVMDIPPEK*SLAFDVFEIFGREIKSKFGASIKILRANNV 1231
             +   +G      F    S Y      +  S  F  F+ F  EIK++FG +I+ILR++N 
Sbjct: 122  QVPSNLGYRYYVTFIDDFSRYTWMTLLKNCSELFSAFQTFYSEIKTQFGKTIRILRSDNA 181

Query: 1232 KDIHIHRF 1255
            K+    +F
Sbjct: 182  KEYFSKQF 189



 Score = 31.6 bits (70), Expect(2) = 5e-07
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = +1

Query: 1270 AHGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            + GII+Q +CP+T   N V ++K+RH++
Sbjct: 195  SQGIIHQCSCPHTPQQNGVADWKHRHIV 222


>gb|KYP40247.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 385

 Score = 50.8 bits (120), Expect(2) = 5e-07
 Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
 Frame = +2

Query: 875  LGHSSPTLIKRFLSYLS-IPRFICDVC*LGK*RQVSCPSTY-SRCNSPCEVNTHSNTCGM 1048
            LGH S   +K+ + +LS +    C+ C LGK  + S P++  SR  SP +V  HS+  G 
Sbjct: 196  LGHPSLNKLKKMVPHLSCLESLECESCQLGKHVRTSFPNSINSRAVSPFDV-IHSDVWGP 254

Query: 1049 SHIFF*IGV*ILYYFC**LSSYVMDIPPEK*SLAFDVFEIFGREIKSKFGASIKILRANN 1228
            S +   +G      F    S        +  S  F++F+ F  EIK++FG  I+ILR++N
Sbjct: 255  SRVPSLLGHRYYVTFIDDFSRCTWIFLMKNRSELFNIFQSFYSEIKTQFGKVIRILRSDN 314

Query: 1229 VKD 1237
             K+
Sbjct: 315  AKE 317



 Score = 33.1 bits (74), Expect(2) = 5e-07
 Identities = 12/28 (42%), Positives = 22/28 (78%)
 Frame = +1

Query: 1270 AHGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            +HGI++Q++CP+T   N V E K++H++
Sbjct: 329  SHGILHQSSCPHTPQQNGVAERKHKHIV 356


>gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1355

 Score = 49.3 bits (116), Expect(2) = 7e-07
 Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
 Frame = +2

Query: 875  LGHSSPTLIKRFLSYLS-IPRFICDVC*LGK*RQVSCPSTY-SRCNSPCEVNTHSNTCGM 1048
            LGH S   +K+ + +LS +    C+ C LGK  + S P++  SR  SP +V  HS+  G 
Sbjct: 428  LGHPSLNKLKKMVPHLSRLVSLECESCQLGKHVRASFPNSINSRAMSPFDV-IHSDVWGP 486

Query: 1049 SHIFF*IGV*ILYYFC**LSSYVMDIPPEK*SLAFDVFEIFGREIKSKFGASIKILRANN 1228
            S I   +G      F    S        +  S  F++F  F  EIK++FG  I+ILR++N
Sbjct: 487  SRIPSLLGHRYYVTFIDDFSRCTWIFLMKNRSELFNIFLSFYSEIKTQFGKVIRILRSDN 546

Query: 1229 VKD 1237
             K+
Sbjct: 547  AKE 549



 Score = 34.3 bits (77), Expect(2) = 7e-07
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 1270 AHGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            +HGI++Q++CP+T   N V E K+RH++
Sbjct: 561  SHGILHQSSCPHTPQQNGVAERKHRHIV 588


>gb|KYP74314.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1275

 Score = 48.9 bits (115), Expect(2) = 8e-07
 Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
 Frame = +2

Query: 875  LGHSSPTLIKRFLSYLS-IPRFICDVC*LGK*RQVSCPSTY-SRCNSPCEVNTHSNTCGM 1048
            LGH S   +K+ + +LS +    C+ C LGK  + S P++  SR  SP +V  HS+  G 
Sbjct: 475  LGHPSLNKLKKMVPHLSRLVSLECESCQLGKHVRASFPNSINSRAMSPFDV-IHSDVWGP 533

Query: 1049 SHIFF*IGV*ILYYFC**LSSYVMDIPPEK*SLAFDVFEIFGREIKSKFGASIKILRANN 1228
            S +   +G      F    S        +  S  F++F  F  EIK++FG  I+ILR++N
Sbjct: 534  SRVPSLLGHRYYVTFIDDFSRCTWIFLMKNRSELFNIFLSFYSEIKTQFGKVIRILRSDN 593

Query: 1229 VKD 1237
             K+
Sbjct: 594  AKE 596



 Score = 34.3 bits (77), Expect(2) = 8e-07
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 1270 AHGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            +HGI++Q++CP+T   N V E K+RH++
Sbjct: 608  SHGILHQSSCPHTPQQNGVAERKHRHIV 635


>gb|AAO26688.1|AF478375_1 gag-pol polyprotein, partial [Vitis vinifera]
          Length = 197

 Score = 41.6 bits (96), Expect(3) = 9e-07
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = +3

Query: 1062 SKLGFKSFITSVDDYPRMLWIYLLKNRA 1145
            S+ GF+ F+T VDD+ RM WIY +KNR+
Sbjct: 12   SQTGFRYFVTFVDDFSRMTWIYFMKNRS 39



 Score = 30.4 bits (67), Expect(3) = 9e-07
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +2

Query: 1142 SLAFDVFEIFGREIKSKFGASIKILRANNVKDIHIHRFLVSLRH 1273
            S  F  F  F  EIK+++  S+KILR++N K+   + F   + H
Sbjct: 39   SEVFSHFCAFSAEIKTQYDVSVKILRSDNGKEYVSNSFQNYMSH 82



 Score = 30.4 bits (67), Expect(3) = 9e-07
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +1

Query: 1273 HGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            +GI++QT+C  T   N V E KNRHL+
Sbjct: 83   NGILHQTSCVDTPSQNGVAERKNRHLL 109


>gb|AAO26689.1|AF478376_1 gag-pol polyprotein, partial [Vitis vinifera]
          Length = 197

 Score = 41.6 bits (96), Expect(3) = 9e-07
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = +3

Query: 1062 SKLGFKSFITSVDDYPRMLWIYLLKNRA 1145
            S+ GF+ F+T VDD+ RM WIY +KNR+
Sbjct: 12   SQTGFRYFVTFVDDFSRMTWIYFMKNRS 39



 Score = 30.4 bits (67), Expect(3) = 9e-07
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +2

Query: 1142 SLAFDVFEIFGREIKSKFGASIKILRANNVKDIHIHRFLVSLRH 1273
            S  F  F  F  EIK+++  S+KILR++N K+   + F   + H
Sbjct: 39   SEVFSHFCAFSAEIKTQYDVSVKILRSDNGKEYVSNSFQNYMSH 82



 Score = 30.4 bits (67), Expect(3) = 9e-07
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +1

Query: 1273 HGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            +GI++QT+C  T   N V E KNRHL+
Sbjct: 83   NGILHQTSCVDTPSQNGVAERKNRHLL 109


>gb|AAO26687.1|AF478374_1 gag-pol polyprotein, partial [Vitis vinifera]
          Length = 197

 Score = 41.6 bits (96), Expect(3) = 9e-07
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = +3

Query: 1062 SKLGFKSFITSVDDYPRMLWIYLLKNRA 1145
            S+ GF+ F+T VDD+ RM WIY +KNR+
Sbjct: 12   SQTGFRYFVTFVDDFSRMTWIYFMKNRS 39



 Score = 30.4 bits (67), Expect(3) = 9e-07
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +2

Query: 1142 SLAFDVFEIFGREIKSKFGASIKILRANNVKDIHIHRFLVSLRH 1273
            S  F  F  F  EIK+++  S+KILR++N K+   + F   + H
Sbjct: 39   SEVFSHFCAFSAEIKTQYDVSVKILRSDNGKEYVSNSFQNYMSH 82



 Score = 30.4 bits (67), Expect(3) = 9e-07
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +1

Query: 1273 HGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            +GI++QT+C  T   N V E KNRHL+
Sbjct: 83   NGILHQTSCVDTPSQNGVAERKNRHLL 109


>gb|KYP71533.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 191

 Score = 46.6 bits (109), Expect(2) = 2e-06
 Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
 Frame = +2

Query: 875  LGHSSPTLIKRFLSYLS-IPRFICDVC*LGK*RQVSCPSTYS-RCNSPCEVNTHSNTCGM 1048
            LGH S   +K+ +++LS +    C+ C LGK  + S P++ + R  SP +V  H +  G 
Sbjct: 4    LGHPSLNKLKKMVTHLSRLESLECESCQLGKHVRASFPNSINNRAMSPFDV-IHFDVWGP 62

Query: 1049 SHIFF*IGV*ILYYFC**LSSYVMDIPPEK*SLAFDVFEIFGREIKSKFGASIKILRANN 1228
            + +    G      F    S Y      +  S  F++F+ F  EIK++FG  I+ILR +N
Sbjct: 63   NCVPSLSGHRYYVTFIDDFSRYTWIFLLQNRSELFNIFQSFYSEIKTQFGKVIRILRIDN 122

Query: 1229 VK 1234
             K
Sbjct: 123  AK 124



 Score = 35.4 bits (80), Expect(2) = 2e-06
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 1270 AHGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            +HGI++Q++CP+T   N V E K+RH++
Sbjct: 137  SHGILHQSSCPHTPQQNDVAEQKHRHIV 164


>gb|OTG33444.1| putative ribonuclease H-like domain-containing protein [Helianthus
            annuus]
          Length = 1427

 Score = 39.3 bits (90), Expect(3) = 4e-06
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = +1

Query: 1273 HGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            +GII+QTTCPYT   N +VE K+RHL+
Sbjct: 618  NGIIHQTTCPYTPQQNGIVERKHRHLL 644



 Score = 35.4 bits (80), Expect(3) = 4e-06
 Identities = 12/27 (44%), Positives = 22/27 (81%)
 Frame = +3

Query: 1062 SKLGFKSFITSVDDYPRMLWIYLLKNR 1142
            S+ G+K F++ VDDY R +W+YL++++
Sbjct: 547  SREGYKYFLSVVDDYSRAVWVYLMEHK 573



 Score = 25.4 bits (54), Expect(3) = 4e-06
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 1151 FDVFEIFGREIKSKFGASIKILRANNVKDIHIHR 1252
            FD  + F   IK++FG +IK  R++N  +   H+
Sbjct: 577  FDNIKSFFNMIKTQFGKTIKTFRSDNGTEFVNHQ 610


>gb|KYP40188.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 289

 Score = 34.3 bits (77), Expect(3) = 4e-06
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 1270 AHGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            +HGI++Q++CP+T   N V E K+RH++
Sbjct: 140  SHGILHQSSCPHTPQQNGVAERKHRHIV 167



 Score = 33.9 bits (76), Expect(3) = 4e-06
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 1065 KLGFKSFITSVDDYPRMLWIYLLKNRA 1145
            K G + + T +DD+ R  WI+L+KNR+
Sbjct: 71   KFGHRYYATFIDDFSRCTWIFLMKNRS 97



 Score = 32.0 bits (71), Expect(3) = 4e-06
 Identities = 14/29 (48%), Positives = 22/29 (75%)
 Frame = +2

Query: 1151 FDVFEIFGREIKSKFGASIKILRANNVKD 1237
            F++F  F  EIK++FG  I+ILR++N K+
Sbjct: 100  FNIFLSFYSEIKTQFGKVIQILRSDNAKE 128


>ref|XP_019058682.1| PREDICTED: uncharacterized protein LOC109116892 [Tarenaya
            hassleriana]
          Length = 1341

 Score = 39.7 bits (91), Expect(3) = 6e-06
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = +1

Query: 1273 HGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            HGI++Q +CPYT   N V E KNRHLM
Sbjct: 507  HGIVHQRSCPYTPQQNGVAERKNRHLM 533



 Score = 30.4 bits (67), Expect(3) = 6e-06
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +2

Query: 1151 FDVFEIFGREIKSKFGASIKILRANN 1228
            FD F+ F   I ++FG SIKILR +N
Sbjct: 466  FDAFKNFFAYISNQFGTSIKILRTDN 491



 Score = 29.3 bits (64), Expect(3) = 6e-06
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +3

Query: 1059 FSKLGFKSFITSVDDYPRMLWIYLLKNRA 1145
            FS+   K F+T +D+  +  WIYLL +++
Sbjct: 435  FSRDAMKYFVTFIDEKSKYTWIYLLPSKS 463


>gb|KYP52255.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 273

 Score = 35.4 bits (80), Expect(3) = 7e-06
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +3

Query: 1062 SKLGFKSFITSVDDYPRMLWIYLLKNRA 1145
            S L F+ F+T +DDY R  W++L+K+R+
Sbjct: 110  STLEFQYFVTFIDDYSRCTWLFLMKSRS 137



 Score = 34.7 bits (78), Expect(3) = 7e-06
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +1

Query: 1270 AHGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            +H I++QT+C YT   N V E KNRHL+
Sbjct: 180  SHDILHQTSCTYTPRQNGVAECKNRHLI 207



 Score = 29.3 bits (64), Expect(3) = 7e-06
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 1142 SLAFDVFEIFGREIKSKFGASIKILRANNVKDIHIHRF 1255
            S  F +F+ F  EI+++FG  I   R++N ++   H F
Sbjct: 137  SKLFFIFQSFYNEIQTQFGVFIHTFRSDNAREYLSHSF 174


>gb|KYP45441.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 936

 Score = 35.8 bits (81), Expect(3) = 8e-06
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = +2

Query: 1151 FDVFEIFGREIKSKFGASIKILRANNVKDIHIHRF 1255
            F +F+ F  EI S+FG SIKILR +N K+    +F
Sbjct: 413  FHIFQSFFSEIASQFGQSIKILRTDNAKEYLSSKF 447



 Score = 32.3 bits (72), Expect(3) = 8e-06
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = +1

Query: 1270 AHGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            + GI++QT+C +T   N V E KNRHL+
Sbjct: 453  SQGILHQTSCAHTPQQNGVAERKNRHLV 480



 Score = 30.8 bits (68), Expect(3) = 8e-06
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +3

Query: 1074 FKSFITSVDDYPRMLWIYLLKNRA 1145
            +  F+T +DD+ R  W++L+K+R+
Sbjct: 387  YSYFVTFIDDFSRCTWVFLMKHRS 410


>gb|KYP55750.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 436

 Score = 37.7 bits (86), Expect(3) = 8e-06
 Identities = 14/28 (50%), Positives = 22/28 (78%)
 Frame = +1

Query: 1270 AHGIIYQTTCPYTS**NQVVEYKNRHLM 1353
            +HG+++Q+TCP+T   N + E KNRHL+
Sbjct: 251  SHGVLHQSTCPHTPQQNGIAERKNRHLV 278



 Score = 32.7 bits (73), Expect(3) = 8e-06
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +3

Query: 1062 SKLGFKSFITSVDDYPRMLWIYLLKNR 1142
            +  G + F+T +D++ R  W+YL+K+R
Sbjct: 181  TSFGLRYFVTFIDEFSRCTWVYLMKDR 207



 Score = 28.5 bits (62), Expect(3) = 8e-06
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = +2

Query: 1157 VFEIFGREIKSKFGASIKILRANNVKD 1237
            +F  F  EI+++FG +IKI +++N K+
Sbjct: 213  IFVSFFNEIQNQFGKTIKIFKSDNAKE 239