BLASTX nr result
ID: Cheilocostus21_contig00055677
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00055677
(1003 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_021760653.1| uncharacterized protein LOC110725491 [Chenop... 53 2e-10
gb|OMO65653.1| hypothetical protein CCACVL1_21443 [Corchorus cap... 51 3e-09
gb|ACB59199.1| copia-like protein [Brassica oleracea] 56 5e-09
gb|OMO90088.1| Integrase, catalytic core [Corchorus capsularis] 50 5e-09
ref|XP_019097465.1| PREDICTED: uncharacterized protein LOC109131... 48 7e-09
dbj|GAV66666.1| hypothetical protein CFOL_v3_10176 [Cephalotus f... 49 9e-07
dbj|GAV63635.1| hypothetical protein CFOL_v3_07153, partial [Cep... 60 1e-06
>ref|XP_021760653.1| uncharacterized protein LOC110725491 [Chenopodium quinoa]
Length = 344
Score = 53.1 bits (126), Expect(3) = 2e-10
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +1
Query: 424 WLKGLLHEFNISYHFPMNMLCDNQFTIFITSNLVFHERIKH 546
WLK LLH + + P+++ CDNQ I+I SN VFHER KH
Sbjct: 247 WLKVLLHSLGVRHRKPIHLFCDNQAAIYIASNPVFHERSKH 287
Score = 31.2 bits (69), Expect(3) = 2e-10
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = +3
Query: 99 DIPYXXXXXSQFI*NPKFYYQNATL*ILLIIKKTPSEVFCIKEMDIRELISIQIHIT*GM 278
D+ Y SQF+ P+ + +A + +L IK P + ++ +L S+ +
Sbjct: 153 DLSYAVHILSQFMQAPRQDHYDAAIRVLRYIKGHPGQGLFLRADSDLQLRSVSGYFV--- 209
Query: 279 WIIEDLSLDFAPMLEETLLPRKVKKQSVVARSS 377
+LE +L+ K KKQ+ V+RSS
Sbjct: 210 ------------LLENSLISWKTKKQTTVSRSS 230
Score = 30.0 bits (66), Expect(3) = 2e-10
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 524 YFTRE*NTEVDCYFITKTISTN--KTTHHAQNLKSN*IFTKTLSSTRFYILCDKLSMIDI 697
+ R + E+DC+F+ + + T H + +FTK L F L KL + D+
Sbjct: 281 FHERSKHIEIDCHFVRELLMQGVISTAHVRTKFQLADLFTKALGVPTFSFLLSKLGVRDL 340
Query: 698 F 700
+
Sbjct: 341 Y 341
>gb|OMO65653.1| hypothetical protein CCACVL1_21443 [Corchorus capsularis]
Length = 1245
Score = 50.8 bits (120), Expect(3) = 3e-09
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +1
Query: 418 MLWLKGLLHEFNISYHFPMNMLCDNQFTIFITSNLVFHERIKH 546
+LWL+ LL I + PM + CDNQ I I +N VFHER KH
Sbjct: 1146 LLWLRSLLQTLGIPHQQPMALFCDNQVAIHIATNPVFHERTKH 1188
Score = 33.1 bits (74), Expect(3) = 3e-09
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 524 YFTRE*NTEVDCYFITKTISTN--KTTHHAQNLKSN*IFTKTLSSTRFYILCDKLSMIDI 697
+ R + E+DC+FI I +T+H + L+ IFTK L +F L KL + ++
Sbjct: 1182 FHERTKHIELDCHFIRSHIQAKSIQTSHISSKLQLADIFTKALGRDQFQFLLRKLGIFNL 1241
Score = 26.2 bits (56), Expect(3) = 3e-09
Identities = 22/93 (23%), Positives = 37/93 (39%)
Frame = +3
Query: 99 DIPYXXXXXSQFI*NPKFYYQNATL*ILLIIKKTPSEVFCIKEMDIRELISIQIHIT*GM 278
+I Y SQF+ +P+ + +A L +L +K P + L
Sbjct: 1039 EISYAVHILSQFMNDPRQPHLDAALRVLRYLKSCPGQGIFFSSSSSPHLTGFSDSDWASC 1098
Query: 279 WIIEDLSLDFAPMLEETLLPRKVKKQSVVARSS 377
+ + ML + + K KKQ+ V+RSS
Sbjct: 1099 PQTRRSTTGYITMLGSSPISWKTKKQTTVSRSS 1131
>gb|ACB59199.1| copia-like protein [Brassica oleracea]
Length = 975
Score = 56.2 bits (134), Expect(2) = 5e-09
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 418 MLWLKGLLHEFNISYHFPMNMLCDNQFTIFITSNLVFHERIKHRSXXXXXXXXXXXXXXX 597
++W+KG+L I+ PM M CDNQ I I SN VFHER KH
Sbjct: 875 LVWIKGILKHLEIAQDTPMTMHCDNQAAIHIASNSVFHERTKHIEVDCHKVRQMIVLGVI 934
Query: 598 TPC-TKSKEQL 627
PC T+S++QL
Sbjct: 935 LPCYTRSEDQL 945
Score = 33.9 bits (76), Expect(2) = 5e-09
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 5/128 (3%)
Frame = +2
Query: 68 IGKLIYFTVMRHPICCGGG*PVYIKPQILLPECHFMNSIN----Y*ENS**-GLLYKRNG 232
+ +LIY T+ R IC + + LP+ H + Y S G+ NG
Sbjct: 756 LAQLIYLTITRPDICFAVN---QVSQHMQLPKEHHWRMVERLLMYLNGSPDQGVWMGCNG 812
Query: 233 XXXXXXXXXXXXXGNVDN*RSISRFRTHVGGNIVT*KSKKAKCGG*I*FEVGYWAMAHVT 412
G+ + RS + + T +GGN+VT KSKK K E Y AM +T
Sbjct: 813 SIEVVGYCDADWAGDRADRRSTTGYCTFIGGNLVTWKSKKQKVVSCSSAEAEYRAMLKLT 872
Query: 413 YKCYGSKG 436
+ KG
Sbjct: 873 NELVWIKG 880
>gb|OMO90088.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1161
Score = 49.7 bits (117), Expect(3) = 5e-09
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +1
Query: 418 MLWLKGLLHEFNISYHFPMNMLCDNQFTIFITSNLVFHERIKH 546
+LWL+ LL + ++ + PM++ CDNQ ++I +N VF ER KH
Sbjct: 1062 LLWLRALLKDLSVQHCSPMSLFCDNQAALYIANNPVFRERTKH 1104
Score = 31.6 bits (70), Expect(3) = 5e-09
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 542 NTEVDCYFITKTISTNKTTHHAQNLKSN*--IFTKTLSSTRFYILCDKLSMIDI 697
+ EVDCYF+ + H K +FTK L + F+ L KL +ID+
Sbjct: 1104 HVEVDCYFVRDHVLAGDIHTHYVASKDQVADLFTKALGNDAFHSLLRKLGIIDL 1157
Score = 28.1 bits (61), Expect(3) = 5e-09
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +3
Query: 99 DIPYXXXXXSQFI*NPKFYYQNATL*ILLIIKKTPSE-VFCIKEMDIRELISIQIHIT*G 275
+I Y SQF+ P+ + +A L IL IK P + +F + D L+S G
Sbjct: 955 EITYSVNLLSQFMQEPRKTHMDAALRILRYIKSFPGQGLFFPADNDF--LLSAFCDADWG 1012
Query: 276 MWIIEDLSLD-FAPMLEETLLPRKVKKQSVVARSS 377
S F ML + + K KKQ+ VARSS
Sbjct: 1013 GCSASRRSTSGFFIMLGKAPIVWKTKKQNTVARSS 1047
>ref|XP_019097465.1| PREDICTED: uncharacterized protein LOC109131227 [Camelina sativa]
Length = 249
Score = 48.1 bits (113), Expect(2) = 7e-09
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 418 MLWLKGLLHEFNISYHFPMNMLCDNQFTIFITSNLVFHERIKHRSXXXXXXXXXXXXXXX 597
++W K LL + + P+ M CDN+ I I +N VFHE KH
Sbjct: 151 LMWFKALLKDLGVESSKPITMHCDNEAAIHIATNSVFHEITKHIEVNCHKVREQIQLGVT 210
Query: 598 TPC-TKSKEQL 627
PC T SKEQL
Sbjct: 211 LPCHTDSKEQL 221
Score = 41.6 bits (96), Expect(2) = 7e-09
Identities = 38/120 (31%), Positives = 52/120 (43%), Gaps = 5/120 (4%)
Frame = +2
Query: 68 IGKLIYFTVMRHPICCGGG*PVYIKPQILLPECHFMNSIN----Y*ENS-**GLLYKRNG 232
+GKLIY T+ RH IC + + P H N +N Y + S G+ RN
Sbjct: 32 VGKLIYLTITRHDICFAVN---QVSQHMQNPTRHHWNMVNRILKYIKGSPGQGIWMGRNK 88
Query: 233 XXXXXXXXXXXXXGNVDN*RSISRFRTHVGGNIVT*KSKKAKCGG*I*FEVGYWAMAHVT 412
G+ + RS + + T +GGN+VT KSKK K E Y AM +T
Sbjct: 89 STELIGYCDVDYAGDRGDRRSTTGYCTFLGGNLVTWKSKKQKVVSLSSAESEYRAMRKLT 148
>dbj|GAV66666.1| hypothetical protein CFOL_v3_10176 [Cephalotus follicularis]
Length = 253
Score = 48.9 bits (115), Expect(2) = 9e-07
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +1
Query: 385 RILGNGSCNI*MLWLKGLLHEFNISYHFPMNMLCDNQFTIFITSNLVFHERIKH 546
R + + +C + +W++ LL E + PM + CDNQ I I+SN VFHER KH
Sbjct: 145 RAMAHTTCEL--MWVRQLLTEIGFTEGSPMQLRCDNQTAIHISSNPVFHERTKH 196
Score = 33.5 bits (75), Expect(2) = 9e-07
Identities = 27/101 (26%), Positives = 44/101 (43%)
Frame = +3
Query: 75 NSFTLL**DIPYXXXXXSQFI*NPKFYYQNATL*ILLIIKKTPSEVFCIKEMDIRELISI 254
N T+ +I + SQF+ +PK + NA + IL +K P ++ R +
Sbjct: 39 NYLTITLPNIAFSASVVSQFLPSPKITHWNAVIRILRYLKGNPGHGLVYRDYGHRRVEGF 98
Query: 255 QIHIT*GMWIIEDLSLDFAPMLEETLLPRKVKKQSVVARSS 377
G + + + + L+ K KKQSVV+RSS
Sbjct: 99 SDADWAGSLVDRRSTTGYCVFVCGNLVSWKSKKQSVVSRSS 139
>dbj|GAV63635.1| hypothetical protein CFOL_v3_07153, partial [Cephalotus
follicularis]
Length = 277
Score = 60.5 bits (145), Expect = 1e-06
Identities = 68/221 (30%), Positives = 96/221 (43%), Gaps = 10/221 (4%)
Frame = +2
Query: 68 IGKLIYFTVMRHPICCGGG*PVYIKPQILL-PECHFMNSI----NY*E-NS**GLLYKRN 229
+GKL Y TV R I PV + Q L P+ N++ Y + N GL Y+
Sbjct: 61 VGKLNYLTVTRPDIAF----PVSVVSQFLATPKITHRNAVIRILRYLKGNPVRGLAYRDY 116
Query: 230 GXXXXXXXXXXXXXGNVDN*RSISRFRTHVGGNIVT*KSKKAKCGG*I*FEVGYWAMAHV 409
G G+ + RSI+R+ VGGN+V+ KSKK E Y AMAH
Sbjct: 117 GHRRVEGFSDADWAGSPVDRRSITRYCVFVGGNLVSGKSKKQSVVARSSAESKYRAMAHT 176
Query: 410 TYKCYGSKGSYMSLTF--HIIFL*ICYVTINLLSLSLAI*YFTRE*NTEVDCYFITKTIS 583
T + K + F C + + S + + R + EVDC+F+ + I
Sbjct: 177 TCELMWVKQLLTEMGFVDSSPMQLWCDNQAAIHNASNPV-FHERTKHIEVDCHFVREKIQ 235
Query: 584 TN--KTTHHAQNLKSN*IFTKTLSSTRFYILCDKLSMIDIF 700
T H + IFTK+L + R LC+KL MIDI+
Sbjct: 236 QGLISTCHVKTGEQLADIFTKSLGNGRVQYLCNKLGMIDIY 276