BLASTX nr result

ID: Cheilocostus21_contig00055402 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00055402
         (442 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY16800.1| ribonuclease H, partial [Trifolium pratense]            47   4e-06
ref|XP_021847859.1| uncharacterized protein LOC110787535 [Spinac...    40   5e-06
ref|XP_021827477.1| uncharacterized protein LOC110768097 [Prunus...    44   5e-06

>gb|PNY16800.1| ribonuclease H, partial [Trifolium pratense]
          Length = 723

 Score = 46.6 bits (109), Expect(2) = 4e-06
 Identities = 25/75 (33%), Positives = 40/75 (53%)
 Frame = +1

Query: 217 IKQVLQFFLFKEGKFPFKSLGAYIAPSALSKTTSKDALDRLNSYLGNWQSNLLSQAGWTT 396
           ++ ++  F FK G  PF  LGA I          +   D++ S L +W+++LLS AG   
Sbjct: 457 LQNIVNLFGFKVGSLPFNYLGAPIFKGRPKARYFQPIADKIKSKLSSWKASLLSIAGRVQ 516

Query: 397 LLNSTILSTPIHALT 441
           L+ S I S  I+++T
Sbjct: 517 LIKSVIQSMTIYSIT 531



 Score = 31.6 bits (70), Expect(2) = 4e-06
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 66  YANDLLSFCANSKFCHNIL-NCMQLFYEIMGLKVNISKSAIF 188
           YA+D++ FC+    C N+L N    +    G  +N SKS I+
Sbjct: 407 YADDIMVFCSGKIACLNVLKNLFVRYANCSGQSINASKSTIY 448


>ref|XP_021847859.1| uncharacterized protein LOC110787535 [Spinacia oleracea]
          Length = 840

 Score = 40.4 bits (93), Expect(2) = 5e-06
 Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
 Frame = +3

Query: 63  FYANDLLSFC-ANSKFCHNILNCMQLFYEIMGLKVNISKSAIFFPK 197
           FYA+D+  F  A+    H+I+N +  F E+ GLK+++SKS + FP+
Sbjct: 162 FYADDVFLFSIASIDNMHSIMNTLDSFGEMFGLKISMSKSTLIFPR 207



 Score = 37.4 bits (85), Expect(2) = 5e-06
 Identities = 23/83 (27%), Positives = 39/83 (46%)
 Frame = +1

Query: 190 FPKFALLMLIKQVLQFFLFKEGKFPFKSLGAYIAPSALSKTTSKDALDRLNSYLGNWQSN 369
           FP+     + + +   + FK      K LG  I P+ L  +     LD+  S +  WQ+ 
Sbjct: 205 FPRSLHNSIRQDIASTYGFKISSCFGKYLGVDIRPNKLRISNYLQLLDKSTSKVRGWQAK 264

Query: 370 LLSQAGWTTLLNSTILSTPIHAL 438
           LL+ AG  TL+   + S P++ +
Sbjct: 265 LLNMAGRCTLIKYVLNSHPLYVM 287


>ref|XP_021827477.1| uncharacterized protein LOC110768097 [Prunus avium]
          Length = 1522

 Score = 43.9 bits (102), Expect(2) = 5e-06
 Identities = 23/57 (40%), Positives = 34/57 (59%)
 Frame = +1

Query: 268  KSLGAYIAPSALSKTTSKDALDRLNSYLGNWQSNLLSQAGWTTLLNSTILSTPIHAL 438
            K LG  +  + ++ TT K  LDR++S L +W+  LLS AG  TL+ +   S PI A+
Sbjct: 971  KYLGMPLLHTRVNHTTYKKLLDRVHSRLASWKGKLLSYAGRATLIQAVTSSIPIDAM 1027



 Score = 33.9 bits (76), Expect(2) = 5e-06
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +3

Query: 63   FYANDLLSFC-ANSKFCHNILNCMQLFYEIMGLKVNISKSAIFFPKICTLNANKAGASIF 239
            F+A+DL+ F  A+ K    +  C++LF +  G  VN  KSA+F    C+ N  K  A   
Sbjct: 902  FFADDLILFAEASVKQARIMKGCLELFCQASGQIVNFDKSAVF----CSSNTPKEVAKEI 957

Query: 240  S 242
            S
Sbjct: 958  S 958


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