BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00054964
         (823 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]                   165   2e-42
gb|ANK58548.1| polyprotein [Fig badnavirus 1]                         164   3e-42
gb|ANK58539.1| polyprotein [Fig badnavirus 1]                         164   3e-42
gb|ANK58542.1| polyprotein [Fig badnavirus 1]                         164   4e-42
gb|ANK58536.1| polyprotein [Fig badnavirus 1]                         163   8e-42
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962...   163   8e-42
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor...   162   2e-41
gb|ANK58545.1| polyprotein [Fig badnavirus 1]                         161   5e-41
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration...   159   3e-40
gb|AIK01824.1| ORF3 [Piper yellow mottle virus]                       157   1e-39
gb|AIK01816.1| ORF3 [Piper yellow mottle virus]                       157   1e-39
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] >gi|5403574...   157   1e-39
gb|AIK01820.1| ORF3 [Piper yellow mottle virus]                       156   3e-39
gb|ASM61279.1| polyprotein, partial [Cacao swollen shoot virus]       141   4e-37
ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus] >gi|...   149   7e-37
gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]                148   1e-36
gb|ATZ69472.1| ORF3 polyprotein [Cacao swollen shoot Ghana K virus]   146   8e-36
gb|ASM61278.1| polyprotein, partial [Cacao swollen shoot virus]       138   9e-36
gb|ASM61263.1| polyprotein, partial [Cacao swollen shoot virus]       137   1e-35
gb|ASM61293.1| polyprotein, partial [Cacao swollen shoot virus]       137   1e-35

>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
          Length = 1846

 Score =  165 bits (417), Expect = 2e-42
 Identities = 85/182 (46%), Positives = 115/182 (63%), Gaps = 9/182 (4%)
 Frame = +1

Query: 304 SKEEEEEFLNPFSTNV-VLAAGTQSQPQA----HEGGESELEYPSLRELQKNLINASSST 468
           S  E ++F+NPF+        G+++  +      E  E  L+YP +++L+K      S++
Sbjct: 424 SDAEMDDFINPFAEGGGERDTGSENSEKLFVFQEEVAEPTLDYPVMKKLEK----VYSTS 479

Query: 469 TALSPYRPPQDEAMGPPGYPPATS----GANPVPVITEEHRRPVKFKPAGRNEMWNLPSA 636
              S Y PP D  MGPP YPPA +    G +          R V FK    +E+W+LP A
Sbjct: 480 EVTSRYTPPTDAVMGPPSYPPARNINGAGTSYAAASPPNFNRRVNFKAGYNDELWSLPPA 539

Query: 637 QRTDGAIFVIPEQLGMFEDAFARWESITKNHVSAQAFTDVRDKIDYMENLLGEMEKLIWV 816
           Q+  GA+FVIPEQ+GMF D F+RWESITKNHVS+Q FTDVRDK++YMENLLGE+EKL+W+
Sbjct: 540 QQKGGAMFVIPEQIGMFHDVFSRWESITKNHVSSQGFTDVRDKLEYMENLLGEVEKLLWI 599

Query: 817 QW 822
           QW
Sbjct: 600 QW 601


>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  164 bits (416), Expect = 3e-42
 Identities = 89/204 (43%), Positives = 120/204 (58%), Gaps = 8/204 (3%)
 Frame = +1

Query: 235  SPSQK----VDKEKSKPSYQEKGKQKISKEEEEEFLNPFSTNVVLAAGTQSQPQAHEGGE 402
            SP +K    +  E+ K    +  ++    + E EF  P      L   ++   +      
Sbjct: 419  SPDEKSLATIRFEEYKEEESQSDEEHYQPDAEAEFDYPLKRIHYLNPFSEGGGKDDHLNS 478

Query: 403  SELEYPSLRELQKNLINASSSTTALSPYRPPQDEAMGPPGYPPATS----GANPVPVITE 570
             E++YP   +  + L++ S  T   SPYRPP+D AMG P YPPA +    GA+       
Sbjct: 479  EEMDYPQRMKKIEKLLSTSEVT---SPYRPPEDAAMGRPSYPPARTIPGGGASSSAEPPR 535

Query: 571  EHRRPVKFKPAGRNEMWNLPSAQRTDGAIFVIPEQLGMFEDAFARWESITKNHVSAQAFT 750
                  +FK    +EMW LPSAQ+ +GA+FVIPEQLG+F DAF+RWES+TKNHV+ Q FT
Sbjct: 536  FDAARTRFKGGYNDEMWTLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFT 595

Query: 751  DVRDKIDYMENLLGEMEKLIWVQW 822
            D RDKI+YMENLLGE+EKLIW+QW
Sbjct: 596  DTRDKIEYMENLLGEIEKLIWIQW 619


>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  164 bits (416), Expect = 3e-42
 Identities = 96/231 (41%), Positives = 127/231 (54%), Gaps = 4/231 (1%)
 Frame = +1

Query: 142  DPFCDGCPRCCDCVGCGQHKKNHGIKEEQTPSPSQKVDKEKSKPSYQEKGKQKISKEEEE 321
            +P CD  P           K    I+ E+      + D+E   P  + +    + +    
Sbjct: 413  EPKCDDSP---------DEKSLATIRFEEYKEEESQSDEEHYHPDAEAEFDYPLKRIH-- 461

Query: 322  EFLNPFSTNVVLAAGTQSQPQAHEGGESELEYPSLRELQKNLINASSSTTALSPYRPPQD 501
             +LNPFS               H   E E++YP   +  + L++ S  T   SPYRPP+D
Sbjct: 462  -YLNPFSEG--------GGKDDHLNSE-EMDYPQRMKKIEKLLSTSEVT---SPYRPPED 508

Query: 502  EAMGPPGYPPATS----GANPVPVITEEHRRPVKFKPAGRNEMWNLPSAQRTDGAIFVIP 669
             AMG P YPPA +    GA+             +FK    +EMW LPSAQ+ +GA+FVIP
Sbjct: 509  AAMGRPSYPPARTIPGGGASSSAEPPRFDAARTRFKGGYNDEMWTLPSAQQKNGAMFVIP 568

Query: 670  EQLGMFEDAFARWESITKNHVSAQAFTDVRDKIDYMENLLGEMEKLIWVQW 822
            EQLG+F DAF+RWES+TKNHV+ Q FTD RDKI+YMENLLGE+EKLIW+QW
Sbjct: 569  EQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIEYMENLLGEIEKLIWIQW 619


>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  164 bits (415), Expect = 4e-42
 Identities = 89/204 (43%), Positives = 120/204 (58%), Gaps = 8/204 (3%)
 Frame = +1

Query: 235  SPSQK----VDKEKSKPSYQEKGKQKISKEEEEEFLNPFSTNVVLAAGTQSQPQAHEGGE 402
            SP +K    +  E+ K    +  ++    + E EF  P      L   ++   +      
Sbjct: 419  SPDEKSLATIRFEEYKEEESQSDEEHYHPDAEAEFDYPLKRIHYLNPFSEGGGKDDHLNS 478

Query: 403  SELEYPSLRELQKNLINASSSTTALSPYRPPQDEAMGPPGYPPATS----GANPVPVITE 570
             E++YP   +  + L++ S  T   SPYRPP+D AMG P YPPA +    GA+       
Sbjct: 479  EEMDYPQRMKKIEKLLSTSEVT---SPYRPPEDAAMGRPSYPPARTIPGGGASSSAEPPR 535

Query: 571  EHRRPVKFKPAGRNEMWNLPSAQRTDGAIFVIPEQLGMFEDAFARWESITKNHVSAQAFT 750
                  +FK    +EMW LPSAQ+ +GA+FVIPEQLG+F DAF+RWES+TKNHV+ Q FT
Sbjct: 536  FDAARTRFKGGYNDEMWTLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFT 595

Query: 751  DVRDKIDYMENLLGEMEKLIWVQW 822
            D RDKI+YMENLLGE+EKLIW+QW
Sbjct: 596  DTRDKIEYMENLLGEIEKLIWIQW 619


>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  163 bits (413), Expect = 8e-42
 Identities = 96/231 (41%), Positives = 126/231 (54%), Gaps = 4/231 (1%)
 Frame = +1

Query: 142  DPFCDGCPRCCDCVGCGQHKKNHGIKEEQTPSPSQKVDKEKSKPSYQEKGKQKISKEEEE 321
            +P CD  P           K    I+ E+      + D+E   P  + +    + +    
Sbjct: 413  EPKCDDSP---------DEKSLATIRFEEYKEEESQSDEEHYHPDAEAEFDYPLKRIH-- 461

Query: 322  EFLNPFSTNVVLAAGTQSQPQAHEGGESELEYPSLRELQKNLINASSSTTALSPYRPPQD 501
             +LNPFS               H   E E++YP   +  + L++ S  T   SPYRPP+D
Sbjct: 462  -YLNPFSEG--------GGKDDHLNSE-EMDYPQRMKKIEKLLSTSEVT---SPYRPPED 508

Query: 502  EAMGPPGYPPATS----GANPVPVITEEHRRPVKFKPAGRNEMWNLPSAQRTDGAIFVIP 669
             AMG P YPPA +    GA+             +FK    +EMW LPSAQ+ +GA+FVIP
Sbjct: 509  AAMGRPSYPPARTIPGGGASSSAEPPRFDAARTRFKGGYNDEMWTLPSAQQKNGAMFVIP 568

Query: 670  EQLGMFEDAFARWESITKNHVSAQAFTDVRDKIDYMENLLGEMEKLIWVQW 822
            EQLG+F DAF+RWES+TKNHV+ Q FTD RDKI YMENLLGE+EKLIW+QW
Sbjct: 569  EQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIKYMENLLGEIEKLIWIQW 619


>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
 gb|AEF56561.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  163 bits (413), Expect = 8e-42
 Identities = 89/204 (43%), Positives = 119/204 (58%), Gaps = 8/204 (3%)
 Frame = +1

Query: 235  SPSQK----VDKEKSKPSYQEKGKQKISKEEEEEFLNPFSTNVVLAAGTQSQPQAHEGGE 402
            SP +K    +  E+ K    +  ++    + E EF  P      L   ++   +      
Sbjct: 419  SPDEKSLATIRFEEYKEEESQSDEEHYQPDAEAEFDYPLKRIHYLNPFSEGGGKDDHLNS 478

Query: 403  SELEYPSLRELQKNLINASSSTTALSPYRPPQDEAMGPPGYPPATS----GANPVPVITE 570
             E++YP   +  + L++ S  T   SPYRPP+D AMG P YPPA +    GA+       
Sbjct: 479  EEMDYPQRMKKIEKLLSTSEVT---SPYRPPEDAAMGRPSYPPARTIPGGGASSSAEPPR 535

Query: 571  EHRRPVKFKPAGRNEMWNLPSAQRTDGAIFVIPEQLGMFEDAFARWESITKNHVSAQAFT 750
                  +FK    +EMW LPSAQ+ +GA+FVIPEQLG+F DAF+RWES+TKNHV+ Q FT
Sbjct: 536  FDAARTRFKGGYNDEMWTLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFT 595

Query: 751  DVRDKIDYMENLLGEMEKLIWVQW 822
            D RDKI YMENLLGE+EKLIW+QW
Sbjct: 596  DTRDKIKYMENLLGEIEKLIWIQW 619


>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
 emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
          Length = 1830

 Score =  162 bits (410), Expect = 2e-41
 Identities = 91/218 (41%), Positives = 126/218 (57%), Gaps = 7/218 (3%)
 Frame = +1

Query: 190  GQHKKNHGIKEEQTPSPSQKVDKEKSKPSYQEKGKQKISKEEEEEF-LNPFSTNVVLAAG 366
            GQ    +    + T  P+  +   + +PS  +   Q   + +        FS+   L   
Sbjct: 384  GQPSGKYDYYVQYTAPPAATIPLTEIQPSGWDDQPQWDDEPQATTIRFEEFSSEAELELA 443

Query: 367  TQSQPQA--HEGGESELEYPSLRELQKNLINASSSTTALSPYRPPQDEAMGPPGYPPATS 540
             Q +  A   E  E EL YP   +  + L++ S  T    PYRPP D AMG P YPPA S
Sbjct: 444  YQQEVFAAVEEEAELELAYPQRFKAIEKLLSTSEVT---GPYRPPDDAAMGRPSYPPARS 500

Query: 541  ----GANPVPVITEEHRRPVKFKPAGRNEMWNLPSAQRTDGAIFVIPEQLGMFEDAFARW 708
                G +     ++ +    +F+    +EMW LPSAQ+ +GA+FV+PEQLG+F DAF+RW
Sbjct: 501  ISEEGVSSSNYPSKFNAARTRFRGGYNDEMWTLPSAQQKNGAMFVLPEQLGLFNDAFSRW 560

Query: 709  ESITKNHVSAQAFTDVRDKIDYMENLLGEMEKLIWVQW 822
            ES+TKNHV+ Q+FTDVRDK++YMENLLGE+EKLIW+QW
Sbjct: 561  ESVTKNHVATQSFTDVRDKMEYMENLLGEIEKLIWIQW 598


>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  161 bits (407), Expect = 5e-41
 Identities = 88/204 (43%), Positives = 119/204 (58%), Gaps = 8/204 (3%)
 Frame = +1

Query: 235  SPSQK----VDKEKSKPSYQEKGKQKISKEEEEEFLNPFSTNVVLAAGTQSQPQAHEGGE 402
            SP +K    +  E+ K    +  ++    + E EF  P      L   ++   +      
Sbjct: 419  SPDEKSLATIRFEEYKEEESQSDEEHYHPDAEAEFDYPLKRIHYLNPFSEGGGKDDHLNS 478

Query: 403  SELEYPSLRELQKNLINASSSTTALSPYRPPQDEAMGPPGYPPATS----GANPVPVITE 570
             E++YP   +  + L++ S  T   SPYRPP+D AM  P YPPA +    GA+       
Sbjct: 479  EEMDYPQRMKKIEKLLSTSEVT---SPYRPPEDAAMRRPSYPPARTIPGGGASSSAEPPR 535

Query: 571  EHRRPVKFKPAGRNEMWNLPSAQRTDGAIFVIPEQLGMFEDAFARWESITKNHVSAQAFT 750
                  +FK    +EMW LPSAQ+ +GA+FVIPEQLG+F DAF+RWES+TKNHV+ Q FT
Sbjct: 536  FDAARTRFKGGYNDEMWTLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFT 595

Query: 751  DVRDKIDYMENLLGEMEKLIWVQW 822
            D RDKI+YMENLLGE+EKLIW+QW
Sbjct: 596  DTRDKIEYMENLLGEIEKLIWIQW 619


>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
          Length = 1789

 Score =  159 bits (401), Expect = 3e-40
 Identities = 79/155 (50%), Positives = 103/155 (66%), Gaps = 4/155 (2%)
 Frame = +1

Query: 370 QSQPQAHEGGESELEYPSLRELQKNLINASSSTTALSPYRPPQDEAMGPPGYPPATS--- 540
           + Q Q     E EL YP   +  + L++ S  T    PYRPP D AMG P YPPA +   
Sbjct: 483 REQEQVLAAVEEELAYPQRFKAIEKLLSTSEVT---GPYRPPDDAAMGRPSYPPARAISE 539

Query: 541 -GANPVPVITEEHRRPVKFKPAGRNEMWNLPSAQRTDGAIFVIPEQLGMFEDAFARWESI 717
            G +     +       +FK    +EMW LPSAQ+ +GA+FV+PEQLG+F DAF+RWES+
Sbjct: 540 EGMSSSNYPSRFDTARTRFKGGYNDEMWTLPSAQQKNGAMFVLPEQLGLFNDAFSRWESV 599

Query: 718 TKNHVSAQAFTDVRDKIDYMENLLGEMEKLIWVQW 822
           TKNHV+ Q+FTDVRDK++YMENLLGE+EKLIW++W
Sbjct: 600 TKNHVATQSFTDVRDKMEYMENLLGEIEKLIWIRW 634


>gb|AIK01824.1| ORF3 [Piper yellow mottle virus]
          Length = 1925

 Score =  157 bits (397), Expect = 1e-39
 Identities = 89/222 (40%), Positives = 123/222 (55%), Gaps = 11/222 (4%)
 Frame = +1

Query: 190  GQHKKNHGIKEEQTPSPSQKVDKEKSKPSYQE-------KGKQKISKEEEEEFLNPFSTN 348
            G H  N   +EE+  SP+    ++     YQ        +G    + EEEEE        
Sbjct: 494  GGHLPNTNSEEEEAISPAVTTPEDIQDDLYQHDLAAINTEGPVWDNSEEEEE-------- 545

Query: 349  VVLAAGTQSQPQAHEGGESELEYPSLRELQKNLINASSSTTALSPYRPPQDEAMGPPGYP 528
                 G  ++ +  E   +++EYP +R L+  +    S+ + +S YRPPQD AMGP  YP
Sbjct: 546  -----GYAAEEEEEE--VNDMEYPHIRALRLKMQEVFSAQSEISQYRPPQDTAMGPSSYP 598

Query: 529  PATSGANPV----PVITEEHRRPVKFKPAGRNEMWNLPSAQRTDGAIFVIPEQLGMFEDA 696
            PA +  N      P+    ++  V+FK     + W LPSAQ+  GA+FVIP QLG+F+  
Sbjct: 599  PAVNITNEAGPSRPMFEGYNKSGVRFKHKDLADSWTLPSAQQQQGAVFVIPTQLGLFDSV 658

Query: 697  FARWESITKNHVSAQAFTDVRDKIDYMENLLGEMEKLIWVQW 822
            FARWESITKN V+AQ FTD  DK+ ++ENLLGE EKL W+QW
Sbjct: 659  FARWESITKNLVAAQGFTDPADKVGFIENLLGEAEKLTWIQW 700


>gb|AIK01816.1| ORF3 [Piper yellow mottle virus]
          Length = 1925

 Score =  157 bits (397), Expect = 1e-39
 Identities = 89/222 (40%), Positives = 119/222 (53%), Gaps = 11/222 (4%)
 Frame = +1

Query: 190  GQHKKNHGIKEEQTPSPSQKVDKEKSKPSYQE-------KGKQKISKEEEEEFLNPFSTN 348
            G H  N   +EE+  SP+    ++     YQ        +G    + EEEEE        
Sbjct: 494  GGHLPNTNYEEEEAISPAVTTPEDIQDDLYQHDLAAINTEGPVWDNSEEEEE-------- 545

Query: 349  VVLAAGTQSQPQAHEGGESELEYPSLRELQKNLINASSSTTALSPYRPPQDEAMGPPGYP 528
                          E    ++EYP +R L+  +    S+ + +S YRPPQD AMGP  YP
Sbjct: 546  --------GYAAEEEEEIDDMEYPHVRALRLKMQEVFSAQSEISQYRPPQDTAMGPSSYP 597

Query: 529  PATSGANPV----PVITEEHRRPVKFKPAGRNEMWNLPSAQRTDGAIFVIPEQLGMFEDA 696
            PA +  N      P+    ++  V+FK     + W LPSAQ+  GA+FVIP QLG+F+  
Sbjct: 598  PAVNITNEAGPSRPMFEGYNKSGVRFKHKDLADNWTLPSAQQQQGAVFVIPTQLGLFDSV 657

Query: 697  FARWESITKNHVSAQAFTDVRDKIDYMENLLGEMEKLIWVQW 822
            FARWESITKN V+AQ FTD  DK+D++ENLLGE EKL W+QW
Sbjct: 658  FARWESITKNLVAAQGFTDPADKVDFIENLLGEAEKLTWIQW 699


>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus]
 gb|AGV08293.1| ORF3 [Piper yellow mottle virus]
          Length = 1925

 Score =  157 bits (397), Expect = 1e-39
 Identities = 89/222 (40%), Positives = 119/222 (53%), Gaps = 11/222 (4%)
 Frame = +1

Query: 190  GQHKKNHGIKEEQTPSPSQKVDKEKSKPSYQE-------KGKQKISKEEEEEFLNPFSTN 348
            G H  N   +EE+  SP+    ++     YQ        +G    + EEEEE        
Sbjct: 494  GGHLPNTNYEEEEAISPAVTTPEDIQDDLYQHDLAAINTEGPVWDNSEEEEE-------- 545

Query: 349  VVLAAGTQSQPQAHEGGESELEYPSLRELQKNLINASSSTTALSPYRPPQDEAMGPPGYP 528
                          E    ++EYP +R L+  +    S+ + +S YRPPQD AMGP  YP
Sbjct: 546  --------GYAAEEEEEIDDMEYPHVRALRLKMQEVFSAQSEISQYRPPQDTAMGPSSYP 597

Query: 529  PATSGANPV----PVITEEHRRPVKFKPAGRNEMWNLPSAQRTDGAIFVIPEQLGMFEDA 696
            PA +  N      P+    ++  V+FK     + W LPSAQ+  GA+FVIP QLG+F+  
Sbjct: 598  PAVNITNEAGPSRPMFEGYNKSGVRFKHKDLADNWTLPSAQQQQGAVFVIPTQLGLFDSV 657

Query: 697  FARWESITKNHVSAQAFTDVRDKIDYMENLLGEMEKLIWVQW 822
            FARWESITKN V+AQ FTD  DK+D++ENLLGE EKL W+QW
Sbjct: 658  FARWESITKNLVAAQGFTDPADKVDFIENLLGEAEKLTWIQW 699


>gb|AIK01820.1| ORF3 [Piper yellow mottle virus]
          Length = 1925

 Score =  156 bits (394), Expect = 3e-39
 Identities = 89/222 (40%), Positives = 122/222 (54%), Gaps = 11/222 (4%)
 Frame = +1

Query: 190  GQHKKNHGIKEEQTPSPSQKVDKEKSKPSYQE-------KGKQKISKEEEEEFLNPFSTN 348
            G H  N   +EE+  SP+    ++     YQ        +G    + EEEEE        
Sbjct: 494  GGHLPNTNSEEEEAISPAVTTPEDIQDDLYQHDLAAINTEGPVWDNSEEEEE-------- 545

Query: 349  VVLAAGTQSQPQAHEGGESELEYPSLRELQKNLINASSSTTALSPYRPPQDEAMGPPGYP 528
                 G  ++ +  E    ++EYP +R L+  +    S+ + +S YRPPQD AMGP  YP
Sbjct: 546  -----GYAAEEEEEE--VDDMEYPHVRALRLKMQEVFSAQSEISQYRPPQDTAMGPSSYP 598

Query: 529  PATSGANPV----PVITEEHRRPVKFKPAGRNEMWNLPSAQRTDGAIFVIPEQLGMFEDA 696
            PA +  N      P+    ++  V+FK     + W LPSAQ+  GA+FVIP QLG+F+  
Sbjct: 599  PAVNITNEAGPSRPMFEGYNKSGVRFKHKDLADNWTLPSAQQQQGAVFVIPTQLGLFDSV 658

Query: 697  FARWESITKNHVSAQAFTDVRDKIDYMENLLGEMEKLIWVQW 822
            FARWESITKN V+AQ FTD  DK+ ++ENLLGE EKL W+QW
Sbjct: 659  FARWESITKNLVAAQGFTDPADKVGFIENLLGEAEKLTWIQW 700


>gb|ASM61279.1| polyprotein, partial [Cacao swollen shoot virus]
          Length = 263

 Score =  141 bits (356), Expect = 4e-37
 Identities = 79/204 (38%), Positives = 115/204 (56%), Gaps = 14/204 (6%)
 Frame = +1

Query: 253 DKEKSKPSYQEKGKQKISKE---EEEEFLNPFSTNVVLAAGTQSQPQAHEGG-----ESE 408
           D+E++ P + E   ++   E   ++EE  + +  NV +A   + + +  E       E E
Sbjct: 5   DEEETPPKWDESPDEEGPSEPIWDQEEEEDEYDPNVYMAYLQKEEDEWQEIAASIQEERE 64

Query: 409 LEYPSLRELQKNLINASSSTTALSPYRPPQDEAMGPPGYPPATSGANPV------PVITE 570
           +EYP  R   + + + +        Y PP D  M P GYPPA+S  + V      P+   
Sbjct: 65  MEYPRRRPQTETVFSETVD------YTPPGDTMMTPVGYPPASSSRSTVTTPSRPPLFEG 118

Query: 571 EHRRPVKFKPAGRNEMWNLPSAQRTDGAIFVIPEQLGMFEDAFARWESITKNHVSAQAFT 750
                 +FK     E W LPS+Q T GA+FV+P+Q+G+F D F+RWESITKN+V+AQ FT
Sbjct: 119 RPTHMPRFKRDDYTEWWQLPSSQGTTGALFVMPKQMGLFHDVFSRWESITKNYVAAQGFT 178

Query: 751 DVRDKIDYMENLLGEMEKLIWVQW 822
           D  +KI++MENLLGE EKL W+QW
Sbjct: 179 DPTEKIEFMENLLGETEKLTWIQW 202


>ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus]
 gb|AKA45804.1| polyprotein [Taro bacilliform CH virus]
          Length = 1803

 Score =  149 bits (376), Expect = 7e-37
 Identities = 80/177 (45%), Positives = 107/177 (60%), Gaps = 6/177 (3%)
 Frame = +1

Query: 310 EEEEEFLNPFSTNVVLAAGTQSQPQAHEGGESELEYPSLRELQKNLINASSSTTALSPYR 489
           +EEEE L    +     A   +        + E++YP L+ LQ++L    +S +A++ Y+
Sbjct: 458 DEEEEILPSSDSCRKEIASYIAAAFPENNADDEIDYPQLKNLQQHLY---ASPSAITGYK 514

Query: 490 PPQDEAMGPPGYPPAT-----SGANPVPVITEEHRR-PVKFKPAGRNEMWNLPSAQRTDG 651
           PPQD AMGPP Y P         A P+    E ++   V++K    +E WNLPSAQ   G
Sbjct: 515 PPQDVAMGPPNYGPTPLRVIRPEAGPLRPAFEGYKPGEVRYKAKDYSEWWNLPSAQHGTG 574

Query: 652 AIFVIPEQLGMFEDAFARWESITKNHVSAQAFTDVRDKIDYMENLLGEMEKLIWVQW 822
           AIF+IP QLGMF D F RWESITKN VS Q FTD  DK++++ENLLGE EK+ W+QW
Sbjct: 575 AIFIIPTQLGMFNDTFMRWESITKNLVSQQGFTDPNDKVEFIENLLGEAEKIAWIQW 631


>gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]
          Length = 1803

 Score =  148 bits (374), Expect = 1e-36
 Identities = 83/182 (45%), Positives = 108/182 (59%), Gaps = 11/182 (6%)
 Frame = +1

Query: 310 EEEEEFLNPFSTNVVLAAGTQSQPQAHEGGESELEYPSLRELQKNLINASSSTTALSPYR 489
           +EEEE L    +     A   +        + E++YP L+ LQ++L    +S +A++ Y+
Sbjct: 458 DEEEEILPSSDSCRKEIASYIAAAFPENNADDEIDYPQLKNLQQHLY---ASPSAITGYK 514

Query: 490 PPQDEAMGPPGYPPATSGANPVPVITEEH--RRP---------VKFKPAGRNEMWNLPSA 636
           PPQD AMGPP Y P      P+ VI  E    RP         V++K    +E WNLPSA
Sbjct: 515 PPQDVAMGPPNYGPT-----PLRVIRPEAGPSRPAFEGYKPGEVRYKTKDYSEWWNLPSA 569

Query: 637 QRTDGAIFVIPEQLGMFEDAFARWESITKNHVSAQAFTDVRDKIDYMENLLGEMEKLIWV 816
           Q   GAIF+IP QLGMF D F RWESITKN VS Q FTD  DK++++ENLLGE EK+ W+
Sbjct: 570 QYGTGAIFIIPTQLGMFNDTFMRWESITKNLVSQQGFTDPNDKVEFIENLLGEAEKIAWI 629

Query: 817 QW 822
           QW
Sbjct: 630 QW 631


>gb|ATZ69472.1| ORF3 polyprotein [Cacao swollen shoot Ghana K virus]
          Length = 1881

 Score =  146 bits (368), Expect = 8e-36
 Identities = 88/227 (38%), Positives = 123/227 (54%), Gaps = 25/227 (11%)
 Frame = +1

Query: 217  KEEQTP---SPSQKVDKEKSKPSYQEKGKQ--------------KISKEEEEEFLNPFST 345
            +EE+ P    P Q  DKE+  P Y+    Q              ++ +EEEE     F  
Sbjct: 417  EEEEFPYCRPPVQPEDKEEDDPDYKPSTVQQEDEDDDDPNVIWARLQREEEERCSFIFEE 476

Query: 346  NVV----LAAGTQSQPQAHEGGESELEYPSLRELQKNLINASSSTTALSPYRPPQDEAMG 513
             +V    +A  T+ +P        ELEYP LR  ++        ++ +  Y PP D  M 
Sbjct: 477  GIVRGEIIATLTEEKPD-------ELEYPQLRNPERVF------SSEVVDYTPPGDTLMT 523

Query: 514  PPGYPPATSGANPVPVITE--EHRRPV--KFKPAGRNEMWNLPSAQRTDGAIFVIPEQLG 681
            P GYPPA++   P PV     E R P   KF+     E W LPS+Q T GA+FV+P+Q+G
Sbjct: 524  PVGYPPASTSRQPQPVRPPLYEGRIPQTPKFRRDDYTEWWQLPSSQATTGALFVMPKQIG 583

Query: 682  MFEDAFARWESITKNHVSAQAFTDVRDKIDYMENLLGEMEKLIWVQW 822
            +F + F+RWESITKN+++ Q FTD  DK++++ENLLGE EKL W+QW
Sbjct: 584  LFHEVFSRWESITKNYIALQEFTDPADKVEFIENLLGETEKLTWIQW 630


>gb|ASM61278.1| polyprotein, partial [Cacao swollen shoot virus]
          Length = 265

 Score =  138 bits (347), Expect = 9e-36
 Identities = 84/195 (43%), Positives = 111/195 (56%), Gaps = 12/195 (6%)
 Frame = +1

Query: 274 SYQEKG-KQKISKEEEEEFLNPFSTNVVLAAGTQSQPQAHEGG-----ESELEYPSLREL 435
           S  E+G  + I  +EEEE  + +  NV +A   + + +  E       E ELEYP  R  
Sbjct: 18  SLDEEGLNEPIWDQEEEE--DEYDPNVYMAYLQKEEDKWQEIAATIQEERELEYPRRRPQ 75

Query: 436 QKNLINASSSTTALSPYRPPQDEAMGPPGYPPATSGANPV------PVITEEHRRPVKFK 597
            +    A S T     Y PP D  M P GYPPA+S  + V      P+         KFK
Sbjct: 76  TET---AFSETV---DYTPPVDTMMTPVGYPPASSSRSTVTTPSRPPLFEGRISHVPKFK 129

Query: 598 PAGRNEMWNLPSAQRTDGAIFVIPEQLGMFEDAFARWESITKNHVSAQAFTDVRDKIDYM 777
                E W LPS+Q T GA+FV+P+Q+G+F D F+RWESITKN+V+AQ FTD  +K+++M
Sbjct: 130 RDDYTEWWQLPSSQGTTGALFVMPKQMGLFHDVFSRWESITKNYVAAQGFTDPTEKMEFM 189

Query: 778 ENLLGEMEKLIWVQW 822
           ENLLGE EKL W+QW
Sbjct: 190 ENLLGETEKLTWIQW 204


>gb|ASM61263.1| polyprotein, partial [Cacao swollen shoot virus]
          Length = 268

 Score =  137 bits (346), Expect = 1e-35
 Identities = 78/195 (40%), Positives = 111/195 (56%), Gaps = 12/195 (6%)
 Frame = +1

Query: 274 SYQEKGKQKISKEEEEEFLNPFSTNVVLAAGTQSQPQAHEGG-----ESELEYPSLRELQ 438
           S  E+G  K   ++EEE  + +  N+ +A   + + +  E       E+E+EYP  R   
Sbjct: 19  SPDEEGSSKPIWDQEEEEEDEYDPNIYMAYLQKEEDEWQEIAAGLQEETEMEYPRRRPQT 78

Query: 439 KNLINASSSTTALSPYRPPQDEAMGPPGYPPATSGANPV-----PVITEEH--RRPVKFK 597
           + + + +        Y PP D  M P GYPPA+S  + V     P + E      P   K
Sbjct: 79  ETVFSETVD------YTPPGDTMMTPVGYPPASSSRSTVTTPSRPPLFEGRVTHVPRFLK 132

Query: 598 PAGRNEMWNLPSAQRTDGAIFVIPEQLGMFEDAFARWESITKNHVSAQAFTDVRDKIDYM 777
                E W LPS+Q T GA+FV+P+Q+G+F D F+RWESITKN+V+AQ FTD  +K+++M
Sbjct: 133 RDDYTEWWQLPSSQGTTGALFVVPKQMGLFHDVFSRWESITKNYVAAQGFTDPTEKMEFM 192

Query: 778 ENLLGEMEKLIWVQW 822
           ENLLGE EKL W+QW
Sbjct: 193 ENLLGETEKLTWIQW 207


>gb|ASM61293.1| polyprotein, partial [Cacao swollen shoot virus]
          Length = 269

 Score =  137 bits (346), Expect = 1e-35
 Identities = 77/193 (39%), Positives = 110/193 (56%), Gaps = 12/193 (6%)
 Frame = +1

Query: 280 QEKGKQKISKEEEEEFLNPFSTNVVLAAGTQSQPQAHEGG-----ESELEYPSLRELQKN 444
           +E+  + I  +EEEE  + +  N+ +A   + + +  E       E E+EYP  R   + 
Sbjct: 22  EERSSEPIWDQEEEEEEDEYDPNIYMAYLQKEEDEWQEIAASLQEEMEMEYPRRRPQTET 81

Query: 445 LINASSSTTALSPYRPPQDEAMGPPGYPPATSGANPV-----PVITEEH--RRPVKFKPA 603
           + + +        Y PP D  M P GYPPA+S  + V     P + E      P   K  
Sbjct: 82  VFSETVD------YTPPADTMMTPVGYPPASSSRSTVTTPSRPPLFEGRVTHVPRFLKRD 135

Query: 604 GRNEMWNLPSAQRTDGAIFVIPEQLGMFEDAFARWESITKNHVSAQAFTDVRDKIDYMEN 783
              E W LPS+Q T GA+FV+P+Q+G+F D F+RWESITKN+V+AQ FTD  +K+++MEN
Sbjct: 136 DYTEWWQLPSSQGTTGALFVMPKQMGLFHDVFSRWESITKNYVAAQGFTDPTEKMEFMEN 195

Query: 784 LLGEMEKLIWVQW 822
           LLGE EKL W+QW
Sbjct: 196 LLGETEKLTWIQW 208