BLASTX nr result

ID: Cheilocostus21_contig00054766 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00054766
         (417 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009399293.1| PREDICTED: agamous-like MADS-box protein AGL...    88   2e-18
gb|OAY81005.1| Agamous-like MADS-box protein AGL62 [Ananas comosus]    55   2e-06

>ref|XP_009399293.1| PREDICTED: agamous-like MADS-box protein AGL29 [Musa acuminata
           subsp. malaccensis]
          Length = 244

 Score = 87.8 bits (216), Expect = 2e-18
 Identities = 60/128 (46%), Positives = 80/128 (62%), Gaps = 13/128 (10%)
 Frame = -1

Query: 411 LRERLAGSVVQSQEIEWAKN-IDSLGLEQLDRLREGFERLKVKSDARINEILSGDGGCQR 235
           L+ERLAG VVQSQEIEWAKN ID LGLEQL+RL++ FERLK ++DARI +IL   G  QR
Sbjct: 121 LQERLAG-VVQSQEIEWAKNNIDHLGLEQLERLKDAFERLKGRADARIQDIL---GTGQR 176

Query: 234 M----------PALSVGGLGIDPAEAEALPSSSFTIWGFTSMQFAANQM--DCVEHSTSG 91
           M          P  S+ G G+ P  A +  +S   +W F ++Q   NQ+  D  +    G
Sbjct: 177 MALHQPQPPPPPPPSMMGFGVPPVGAASSSTSYHPVWTFNTLQ-VPNQVEPDPYQAQWLG 235

Query: 90  SNVGW*HQ 67
           S++G+ H+
Sbjct: 236 SSMGYMHE 243


>gb|OAY81005.1| Agamous-like MADS-box protein AGL62 [Ananas comosus]
          Length = 217

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 33/86 (38%), Positives = 49/86 (56%)
 Frame = -1

Query: 411 LRERLAGSVVQSQEIEWAKNIDSLGLEQLDRLREGFERLKVKSDARINEILSGDGGCQRM 232
           L+ERL  +  Q+ E +W +N++ LGLE+L RL+E   RLK +++ R+NE+L G G     
Sbjct: 120 LQERLRVAA-QAGECKWLENVERLGLEELRRLKESLGRLKSQANKRMNELLRGGGPSSST 178

Query: 231 PALSVGGLGIDPAEAEALPSSSFTIW 154
              S   L + P E  A P    T+W
Sbjct: 179 TGSSRTALTVTP-ENMANPFEPITLW 203


Top