BLASTX nr result

ID: Cheilocostus21_contig00054681 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00054681
         (472 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018679516.1| PREDICTED: pentatricopeptide repeat-containi...    65   4e-09

>ref|XP_018679516.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Musa acuminata subsp. malaccensis]
          Length = 582

 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 36/56 (64%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
 Frame = -3

Query: 164 LSCMPSLTHS--PFSTFAQSFLLHLPCNIRRFSSQESSRNDLIRSVAELLKRFSNN 3
           LSCMPSL     PFS  AQS L  LP +IR  SSQESSRNDL RS  EL+KRF  N
Sbjct: 16  LSCMPSLPLPLLPFSPLAQSLLRRLPAHIRMMSSQESSRNDLFRSFVELVKRFPGN 71


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