BLASTX nr result
ID: Cheilocostus21_contig00054418
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00054418
(664 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010527203.1| PREDICTED: uncharacterized protein LOC104804... 59 2e-07
emb|CAN73536.1| hypothetical protein VITISV_042993 [Vitis vinifera] 60 7e-07
gb|KYP70964.1| Copia protein [Cajanus cajan] 55 1e-06
gb|KYP43009.1| Retrovirus-related Pol polyprotein from transposo... 54 2e-06
gb|KYP63761.1| Retrovirus-related Pol polyprotein from transposo... 54 2e-06
gb|KYP32322.1| Copia protein [Cajanus cajan] 54 2e-06
ref|XP_020208425.1| uncharacterized protein LOC109793376 [Cajanu... 54 2e-06
ref|XP_020211619.1| uncharacterized protein LOC109796352 [Cajanu... 54 2e-06
gb|KYP70520.1| Copia protein [Cajanus cajan] 54 2e-06
dbj|GAV67639.1| hypothetical protein CFOL_v3_11144 [Cephalotus f... 58 2e-06
gb|KYP63787.1| Copia protein [Cajanus cajan] 54 2e-06
gb|KYP66755.1| Copia protein [Cajanus cajan] 54 3e-06
gb|KYP32318.1| Copia protein [Cajanus cajan] 53 4e-06
gb|KHN05278.1| Copia protein [Glycine soja] 50 6e-06
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 51 7e-06
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] >gi|386038... 51 7e-06
gb|KYP56739.1| Retrovirus-related Pol polyprotein from transposo... 54 7e-06
gb|KYP44841.1| Retrovirus-related Pol polyprotein from transposo... 54 9e-06
gb|KYP77073.1| Retrovirus-related Pol polyprotein from transposo... 52 9e-06
gb|PNX98092.1| retrovirus-related Pol polyprotein from transposo... 57 1e-05
>ref|XP_010527203.1| PREDICTED: uncharacterized protein LOC104804587 [Tarenaya
hassleriana]
Length = 157
Score = 58.9 bits (141), Expect = 2e-07
Identities = 22/42 (52%), Positives = 33/42 (78%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIKKVYSL 664
+HCD QA+I I +N +FHERTKHIE +YHF++ +++ + SL
Sbjct: 28 LHCDNQAAIHIATNPVFHERTKHIEVDYHFVREKVLQDIISL 69
>emb|CAN73536.1| hypothetical protein VITISV_042993 [Vitis vinifera]
Length = 594
Score = 60.1 bits (144), Expect = 7e-07
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIKK 652
MHCD QA+I I+SN +FHERTKHIE + HF++NV+ K
Sbjct: 515 MHCDNQAAIHIVSNPVFHERTKHIEVDCHFVRNVVTSK 552
>gb|KYP70964.1| Copia protein [Cajanus cajan]
Length = 107
Score = 55.1 bits (131), Expect(2) = 1e-06
Identities = 21/37 (56%), Positives = 31/37 (83%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIK 649
+HCD+QA++ I+ N +FHERTKHIE + HFI+N I++
Sbjct: 28 LHCDSQAALHIVKNPVFHERTKHIEVDCHFIRNEILQ 64
Score = 25.8 bits (55), Expect(2) = 1e-06
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 475 TA*EAAWLHSLVKDLGFSH 531
T E WL SL+ DLG SH
Sbjct: 4 TCCELKWLQSLLADLGISH 22
>gb|KYP43009.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1063
Score = 54.3 bits (129), Expect(2) = 2e-06
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIK 649
+HCD+QA++ I N +FHERTKHIE + HFI+N I++
Sbjct: 1009 LHCDSQAALHIAKNPVFHERTKHIEVDCHFIRNEILQ 1045
Score = 25.8 bits (55), Expect(2) = 2e-06
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 475 TA*EAAWLHSLVKDLGFSH 531
T E WL SL+ DLG SH
Sbjct: 985 TCCELKWLRSLLADLGISH 1003
>gb|KYP63761.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1048
Score = 54.3 bits (129), Expect(2) = 2e-06
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIK 649
+HCD+QA++ I N +FHERTKHIE + HFI+N I++
Sbjct: 969 LHCDSQAALHIAKNPVFHERTKHIEVDCHFIRNEILQ 1005
Score = 25.8 bits (55), Expect(2) = 2e-06
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 475 TA*EAAWLHSLVKDLGFSH 531
T E WL SL+ DLG SH
Sbjct: 945 TCCELKWLRSLLADLGISH 963
>gb|KYP32322.1| Copia protein [Cajanus cajan]
Length = 403
Score = 54.3 bits (129), Expect(2) = 2e-06
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIK 649
+HCD+QA++ I N +FHERTKHIE + HFI+N I++
Sbjct: 324 LHCDSQAALHIAKNPVFHERTKHIEVDCHFIRNEILQ 360
Score = 25.8 bits (55), Expect(2) = 2e-06
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 475 TA*EAAWLHSLVKDLGFSH 531
T E WL SL+ DLG SH
Sbjct: 300 TCCELKWLRSLLADLGISH 318
>ref|XP_020208425.1| uncharacterized protein LOC109793376 [Cajanus cajan]
Length = 322
Score = 54.3 bits (129), Expect(2) = 2e-06
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIK 649
+HCD+QA++ I N +FHERTKHIE + HFI+N I++
Sbjct: 243 LHCDSQAALHIAKNPVFHERTKHIEVDCHFIRNEILQ 279
Score = 25.8 bits (55), Expect(2) = 2e-06
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 475 TA*EAAWLHSLVKDLGFSH 531
T E WL SL+ DLG SH
Sbjct: 219 TCCELKWLRSLLADLGISH 237
>ref|XP_020211619.1| uncharacterized protein LOC109796352 [Cajanus cajan]
Length = 291
Score = 54.3 bits (129), Expect(2) = 2e-06
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIK 649
+HCD+QA++ I N +FHERTKHIE + HFI+N I++
Sbjct: 212 LHCDSQAALHIAKNPVFHERTKHIEVDCHFIRNEILQ 248
Score = 25.8 bits (55), Expect(2) = 2e-06
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 475 TA*EAAWLHSLVKDLGFSH 531
T E WL SL+ DLG SH
Sbjct: 188 TCCELKWLRSLLADLGISH 206
>gb|KYP70520.1| Copia protein [Cajanus cajan]
Length = 247
Score = 54.3 bits (129), Expect(2) = 2e-06
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIK 649
+HCD+QA++ I N +FHERTKHIE + HFI+N I++
Sbjct: 168 LHCDSQAALHIAKNPVFHERTKHIEVDCHFIRNEILQ 204
Score = 25.8 bits (55), Expect(2) = 2e-06
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 475 TA*EAAWLHSLVKDLGFSH 531
T E WL SL+ DLG SH
Sbjct: 144 TCCELKWLRSLLADLGISH 162
>dbj|GAV67639.1| hypothetical protein CFOL_v3_11144 [Cephalotus follicularis]
Length = 253
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIKKV 655
M CD Q +I I SN ++HERTKHIE NYHF+++ ++KK+
Sbjct: 174 MFCDNQVAIYIASNPVYHERTKHIEVNYHFVRDAVMKKL 212
>gb|KYP63787.1| Copia protein [Cajanus cajan]
Length = 107
Score = 54.3 bits (129), Expect(2) = 2e-06
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIK 649
+HCD+QA++ I N +FHERTKHIE + HFI+N I++
Sbjct: 28 LHCDSQATLHIAKNPVFHERTKHIEVDCHFIRNEILQ 64
Score = 25.8 bits (55), Expect(2) = 2e-06
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 475 TA*EAAWLHSLVKDLGFSH 531
T E WL SL+ DLG SH
Sbjct: 4 TCYELKWLRSLLADLGISH 22
>gb|KYP66755.1| Copia protein [Cajanus cajan]
Length = 82
Score = 53.9 bits (128), Expect = 3e-06
Identities = 20/41 (48%), Positives = 32/41 (78%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIKKVYS 661
++CD+Q++I I SN +FHERTKHIE ++HF++ ++ K S
Sbjct: 3 LYCDSQSAIHIASNPVFHERTKHIELDFHFVRKHVLSKTIS 43
>gb|KYP32318.1| Copia protein [Cajanus cajan]
Length = 61
Score = 53.1 bits (126), Expect = 4e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIK 649
+HCD+QA++ I N +FHERTKHIE + HFI N I++
Sbjct: 3 LHCDSQAALHIAKNPVFHERTKHIEVDCHFIHNEILQ 39
>gb|KHN05278.1| Copia protein [Glycine soja]
Length = 107
Score = 49.7 bits (117), Expect(2) = 6e-06
Identities = 19/36 (52%), Positives = 29/36 (80%)
Frame = +2
Query: 536 IMHCDTQASISIMSNSIFHERTKHIETNYHFIKNVI 643
+++CD +A++ I SN +FHERT+HIE N HFI++ I
Sbjct: 27 LLYCDNKATLHIASNPVFHERTRHIEINCHFIRDKI 62
Score = 28.9 bits (63), Expect(2) = 6e-06
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 475 TA*EAAWLHSLVKDLGFSHANHAL*Y 552
T E +WL SL+KDLG H+ L Y
Sbjct: 4 TCCELSWLRSLLKDLGILHSRATLLY 29
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 50.8 bits (120), Expect(2) = 7e-06
Identities = 18/39 (46%), Positives = 32/39 (82%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIKKV 655
+HCD++A+I I +N +FHERTKHIE++ H +++ ++ K+
Sbjct: 1417 LHCDSEAAIHIAANPVFHERTKHIESDCHKVRDAVLDKL 1455
Score = 27.3 bits (59), Expect(2) = 7e-06
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 472 YTA*EAAWLHSLVKDLGFSHAN 537
YT E WL +L+KDLG H++
Sbjct: 1392 YTLKELKWLKALLKDLGVHHSS 1413
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana]
gb|AAR24647.1| At2g23330 [Arabidopsis thaliana]
dbj|BAE99183.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 776
Score = 50.8 bits (120), Expect(2) = 7e-06
Identities = 18/39 (46%), Positives = 32/39 (82%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIKKV 655
+HCD++A+I I +N +FHERTKHIE++ H +++ ++ K+
Sbjct: 697 LHCDSEAAIHIAANPVFHERTKHIESDCHKVRDAVLDKL 735
Score = 27.3 bits (59), Expect(2) = 7e-06
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 472 YTA*EAAWLHSLVKDLGFSHAN 537
YT E WL +L+KDLG H++
Sbjct: 672 YTLKELKWLKALLKDLGVHHSS 693
>gb|KYP56739.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 581
Score = 54.3 bits (129), Expect(2) = 7e-06
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIK 649
+HCD+QA++ I N +FHERTKHIE + HFI+N I++
Sbjct: 502 LHCDSQAALHIAKNPVFHERTKHIEVDCHFIRNEILQ 538
Score = 23.9 bits (50), Expect(2) = 7e-06
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 475 TA*EAAWLHSLVKDLGFSH 531
T E WL SL+ +LG SH
Sbjct: 478 TCCELKWLRSLLANLGISH 496
>gb|KYP44841.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 126
Score = 53.9 bits (128), Expect = 9e-06
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIKKVYS 661
++CD+Q++I I SN +FHERTKHIE N HFI+ ++ K S
Sbjct: 40 LYCDSQSAIHIASNPVFHERTKHIELNCHFIREHVMSKTIS 80
>gb|KYP77073.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1069
Score = 52.0 bits (123), Expect(2) = 9e-06
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +2
Query: 539 MHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIK 649
+HCD+QA++ I N +FHERTK+IE + HFI+N I++
Sbjct: 990 LHCDSQAALHIAKNPVFHERTKYIEVDCHFIRNEILQ 1026
Score = 25.8 bits (55), Expect(2) = 9e-06
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 475 TA*EAAWLHSLVKDLGFSH 531
T E WL SL+ DLG SH
Sbjct: 966 TCCELKWLRSLLADLGISH 984
>gb|PNX98092.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 503
Score = 56.6 bits (135), Expect = 1e-05
Identities = 22/38 (57%), Positives = 31/38 (81%)
Frame = +2
Query: 536 IMHCDTQASISIMSNSIFHERTKHIETNYHFIKNVIIK 649
I+HCD+QA++ I N +FHERTKHIE + HF++N I+K
Sbjct: 423 IVHCDSQAALHIAKNPVFHERTKHIEVDCHFVRNEILK 460