BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00054225
         (638 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009229919.1| polyprotein [Blackberry Virus F] >gi|6892539...   124   9e-43
ref|YP_002117531.1| ORF3 [Cycad leaf necrosis virus] >gi|1943991...   115   2e-39
gb|ATZ69530.1| ORF3 polyprotein [Cacao Bacilliform SriLanka Virus]    114   2e-37
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]               114   9e-36
emb|CAE03089.2| OSJNBa0017B10.4 [Oryza sativa Japonica Group]         103   3e-33
gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group]     102   5e-33
gb|AAP53741.2| transposon protein, putative, CACTA, En/Spm sub-c...   103   1e-32
tpd|FAA01202.1| TPA: orf y [Oryza sativa Japonica Group]              103   1e-32
tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacillifo...   103   1e-32
gb|ABA99372.1| retrotransposon protein, putative, Ty3-gypsy subc...   103   1e-32
gb|ABG66247.1| retrotransposon protein, putative, Ty3-gypsy subc...   103   1e-32
tpd|FAA01208.1| TPA: orf y [Oryza sativa Japonica Group]              103   2e-32
tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacillifo...   103   2e-32
tpd|FAA01199.1| TPA: orf y [Oryza sativa Japonica Group]              103   2e-32
tpd|FAA01211.1| TPA: orf y [Oryza sativa Japonica Group]              102   2e-32
gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subc...   103   2e-32
tpd|FAA01205.1| TPA: orf y [Oryza sativa Japonica Group]              103   3e-32
tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacillifo...   103   3e-32
gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subc...   103   5e-32
emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group] >g...   101   1e-31

>ref|YP_009229919.1| polyprotein [Blackberry Virus F]
 gb|AHX37579.1| polyprotein [Blackberry Virus F]
          Length = 1948

 Score =  124 bits (311), Expect(2) = 9e-43
 Identities = 57/83 (68%), Positives = 68/83 (81%)
 Frame = +3

Query: 354  QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
            +GK +MV++YK LNDN +KDQY+LPGI+ +L +I   KI+SKFDLKS FH VAMD +SIP
Sbjct: 1398 KGKERMVFNYKTLNDNTFKDQYSLPGINTILQRIGKSKIYSKFDLKSGFHQVAMDEESIP 1457

Query: 534  WTAFICPHGHYEWLAMPFGLKNA 602
            WTAFI P G YEWL MPFGLKNA
Sbjct: 1458 WTAFITPEGLYEWLVMPFGLKNA 1480



 Score = 77.8 bits (190), Expect(2) = 9e-43
 Identities = 42/96 (43%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
 Frame = +1

Query: 76   IKEYCYYNMGKFTD-FKAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQ 252
            I+E  YY++G  +  F+    PLL +L+   Y+G +    W K++V C+LEIINPD TIQ
Sbjct: 1282 IREMVYYSLGHTSPKFQERFKPLLERLKEQGYVGEEPMRHWSKNQVKCKLEIINPDITIQ 1341

Query: 253  DK-LIIPSPDTAEEYKKHIDELLALIVIRPSNSHHR 357
            DK +   +P   ++++KH   LL L VIRPS S HR
Sbjct: 1342 DKPMKHVTPAMKDQFQKHTQALLKLGVIRPSKSRHR 1377


>ref|YP_002117531.1| ORF3 [Cycad leaf necrosis virus]
 gb|ACF60613.1| ORF3 [Cycad leaf necrosis virus]
          Length = 1916

 Score =  115 bits (288), Expect(2) = 2e-39
 Identities = 54/83 (65%), Positives = 65/83 (78%)
 Frame = +3

Query: 354  QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
            +GK ++V++YKRLNDN  KDQY+LPGI+ ++ +I   KI+SKFDLKS FH VAMDP SI 
Sbjct: 1401 RGKERLVFNYKRLNDNTEKDQYSLPGINTIIQRIGRSKIYSKFDLKSGFHQVAMDPASIE 1460

Query: 534  WTAFICPHGHYEWLAMPFGLKNA 602
            WTAF    G YEWL MPFGLKNA
Sbjct: 1461 WTAFWAIDGLYEWLVMPFGLKNA 1483



 Score = 75.9 bits (185), Expect(2) = 2e-39
 Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 8/123 (6%)
 Frame = +1

Query: 13   MLQPMSVLKN*KKLSILSILDIKEYCYYNMGKFTD-------FKAGILPLLYQLENLQYI 171
            +L  +   ++ ++++ +  L++ E  Y N+G   D       F      L+ +L+ +  I
Sbjct: 1251 LLTTVQTSRHAQQIAAIQELELDEIEYQNLGALDDQAFFNKKFMEQNRALMERLKKIGII 1310

Query: 172  GSDSAVAWKKSKVLCRLEIINPDFTIQDK-LIIPSPDTAEEYKKHIDELLALIVIRPSNS 348
            G D    W+++KV C+L+IINP+ TI+DK L   +P   E+ +KHID+LL L VIRPS S
Sbjct: 1311 GEDPLKFWERNKVKCKLDIINPNLTIEDKPLKHVTPAMKEQMRKHIDKLLELKVIRPSKS 1370

Query: 349  HHR 357
             HR
Sbjct: 1371 RHR 1373


>gb|ATZ69530.1| ORF3 polyprotein [Cacao Bacilliform SriLanka Virus]
          Length = 1772

 Score =  114 bits (285), Expect(2) = 2e-37
 Identities = 55/94 (58%), Positives = 69/94 (73%)
 Frame = +3

Query: 354  QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
            +GK +MV++Y+ LNDN +KDQY+LPGI+ +L KI   K+FSKFDLKS FH + MD +SI 
Sbjct: 1270 KGKERMVFNYRSLNDNTHKDQYSLPGINTILKKIGEAKVFSKFDLKSGFHQILMDEESIE 1329

Query: 534  WTAFICPHGHYEWLAMPFGLKNAVCLSAQDGLDF 635
            WTAF  P   YEWL MPFGLKNA  +  Q  +DF
Sbjct: 1330 WTAFTAPSELYEWLVMPFGLKNAPAI-FQRKMDF 1362



 Score = 70.1 bits (170), Expect(2) = 2e-37
 Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
 Frame = +1

Query: 76   IKEYCYYNMGKFTD-FKAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQ 252
            IKE  +YN GK  + F+     +L  L    ++G +    W K+ + C+L+IINP  TIQ
Sbjct: 1155 IKEMVHYNEGKTLEAFRMKFGGILESLAKEGFVGLNPLQHWAKNGIKCKLDIINPSLTIQ 1214

Query: 253  DK-LIIPSPDTAEEYKKHIDELLALIVIRPSNSHHR 357
            DK L   +P   + ++KHI ELL L VIRPS S HR
Sbjct: 1215 DKPLKHVTPAMIQSFQKHIKELLDLQVIRPSKSRHR 1250


>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1979

 Score =  114 bits (284), Expect(2) = 9e-36
 Identities = 55/83 (66%), Positives = 62/83 (74%)
 Frame = +3

Query: 354  QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
            +GK +MV+ YKRLND   KDQY+LPGI  +L ++K   IFSKFDLKS FH VAM P SI 
Sbjct: 1448 KGKERMVFIYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIE 1507

Query: 534  WTAFICPHGHYEWLAMPFGLKNA 602
            WTAF  P G YEWL MPFGLKNA
Sbjct: 1508 WTAFWVPSGLYEWLVMPFGLKNA 1530



 Score = 64.7 bits (156), Expect(2) = 9e-36
 Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
 Frame = +1

Query: 76   IKEYCYYNMGK-FTDFKAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQ 252
            I+E   Y+  + F  F+     L+ +L+   YIG +    W K++V+C L+I NPD  I+
Sbjct: 1332 IQEMVAYSTERPFVHFQQKFAGLIQELKAQGYIGEEPMKYWAKNQVVCHLDIKNPDMVIE 1391

Query: 253  DK-LIIPSPDTAEEYKKHIDELLALIVIRPSNSHHR 357
            D+ L   +P   E ++KH++ LL +  IRPS S HR
Sbjct: 1392 DRPLKHVTPQMEESFRKHVEALLKIGAIRPSKSRHR 1427


>emb|CAE03089.2| OSJNBa0017B10.4 [Oryza sativa Japonica Group]
          Length = 429

 Score =  103 bits (256), Expect(2) = 3e-33
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = +3

Query: 354 QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
           +GKS+MV +YKRLNDN  +D Y +P     + +I+  K FSKFDLK+ F  V M  +SI 
Sbjct: 120 RGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIE 179

Query: 534 WTAFICPHGHYEWLAMPFGLKNA 602
           WTAF CP GHYEWL MP GLKNA
Sbjct: 180 WTAFTCPQGHYEWLVMPLGLKNA 202



 Score = 67.0 bits (162), Expect(2) = 3e-33
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
 Frame = +1

Query: 91  YYNMGKFTDFKA--GILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLI 264
           YY   ++ D K+   I  ++ +LE++Q IG      W+K+ + C++ IINP++ I+   I
Sbjct: 16  YYADHRYRDIKSKRDIEKIIQRLEDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPI 75

Query: 265 IPSPDTAEEYKKHIDELLALIVIRPSNSHHRA 360
             +P   EE+K HI+ELL L  IR S S HR+
Sbjct: 76  EATPKDIEEFKMHIEELLKLGAIRESRSPHRS 107


>gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1326

 Score =  102 bits (255), Expect(2) = 5e-33
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = +3

Query: 354  QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
            +GKS+MV +YKRLNDN  +D Y +P     + +I+  K FSKFDLK+ F  V M  +SI 
Sbjct: 911  RGKSRMVKNYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKTGFWQVKMAEESIE 970

Query: 534  WTAFICPHGHYEWLAMPFGLKNA 602
            WTAF CP GHYEWL MP GLKNA
Sbjct: 971  WTAFTCPQGHYEWLVMPLGLKNA 993



 Score = 66.6 bits (161), Expect(2) = 5e-33
 Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
 Frame = +1

Query: 109  FTDFKA--GILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLIIPSPDT 282
            + DFK+   I  ++ +LE++Q IG    + W+K+ + C++ IINP++ I+   I  +P  
Sbjct: 813  YRDFKSKRDIEKIIQRLEDIQIIGEIPMIYWEKNAIECKINIINPEYIIKTSPIEATPKD 872

Query: 283  AEEYKKHIDELLALIVIRPSNSHHRA 360
             E++K HI+ELL L  IR S S HR+
Sbjct: 873  IEQFKMHIEELLKLGAIRESRSPHRS 898


>gb|AAP53741.2| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
            Japonica Group]
          Length = 2828

 Score =  103 bits (258), Expect(2) = 1e-32
 Identities = 49/86 (56%), Positives = 59/86 (68%)
 Frame = +3

Query: 354  QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
            +GKS+MV +YKRLNDN  +D Y +P     + +I+  K FSKFDLK+ F  V M  +SI 
Sbjct: 2295 RGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIE 2354

Query: 534  WTAFICPHGHYEWLAMPFGLKNAVCL 611
            WTAF CP GHYEWL MP GLKNA  L
Sbjct: 2355 WTAFTCPQGHYEWLVMPLGLKNAPAL 2380



 Score = 64.3 bits (155), Expect(2) = 1e-32
 Identities = 32/80 (40%), Positives = 49/80 (61%)
 Frame = +1

Query: 121  KAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLIIPSPDTAEEYKK 300
            K  I  ++ +LE++Q IG      W+K+ + C++ IINP++ I+   I  +P   EE+K 
Sbjct: 2203 KKDIEKIVQRLEDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFKM 2262

Query: 301  HIDELLALIVIRPSNSHHRA 360
            HI+ELL L  IR S S HR+
Sbjct: 2263 HIEELLKLGAIRESRSPHRS 2282


>tpd|FAA01202.1| TPA: orf y [Oryza sativa Japonica Group]
          Length = 1711

 Score =  103 bits (258), Expect(2) = 1e-32
 Identities = 49/86 (56%), Positives = 59/86 (68%)
 Frame = +3

Query: 354  QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
            +GKS+MV +YKRLNDN  +D Y +P     + +I+  K FSKFDLK+ F  V M  +SI 
Sbjct: 1329 RGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIE 1388

Query: 534  WTAFICPHGHYEWLAMPFGLKNAVCL 611
            WTAF CP GHYEWL MP GLKNA  L
Sbjct: 1389 WTAFTCPQGHYEWLVMPLGLKNAPAL 1414



 Score = 64.3 bits (155), Expect(2) = 1e-32
 Identities = 32/80 (40%), Positives = 49/80 (61%)
 Frame = +1

Query: 121  KAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLIIPSPDTAEEYKK 300
            K  I  ++ +LE++Q IG      W+K+ + C++ IINP++ I+   I  +P   EE+K 
Sbjct: 1237 KKDIEKIVQRLEDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFKM 1296

Query: 301  HIDELLALIVIRPSNSHHRA 360
            HI+ELL L  IR S S HR+
Sbjct: 1297 HIEELLKLGAIRESRSPHRS 1316


>tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1711

 Score =  103 bits (258), Expect(2) = 1e-32
 Identities = 49/86 (56%), Positives = 59/86 (68%)
 Frame = +3

Query: 354  QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
            +GKS+MV +YKRLNDN  +D Y +P     + +I+  K FSKFDLK+ F  V M  +SI 
Sbjct: 1329 RGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIE 1388

Query: 534  WTAFICPHGHYEWLAMPFGLKNAVCL 611
            WTAF CP GHYEWL MP GLKNA  L
Sbjct: 1389 WTAFTCPQGHYEWLVMPLGLKNAPAL 1414



 Score = 64.3 bits (155), Expect(2) = 1e-32
 Identities = 32/80 (40%), Positives = 49/80 (61%)
 Frame = +1

Query: 121  KAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLIIPSPDTAEEYKK 300
            K  I  ++ +LE++Q IG      W+K+ + C++ IINP++ I+   I  +P   EE+K 
Sbjct: 1237 KKDIEKIVQRLEDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFKM 1296

Query: 301  HIDELLALIVIRPSNSHHRA 360
            HI+ELL L  IR S S HR+
Sbjct: 1297 HIEELLKLGAIRESRSPHRS 1316


>gb|ABA99372.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1098

 Score =  103 bits (258), Expect(2) = 1e-32
 Identities = 49/86 (56%), Positives = 59/86 (68%)
 Frame = +3

Query: 354 QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
           +GKS+MV +YKRLNDN  +D Y +P     + +I+  K FSKFDLK+ F  V M  +SI 
Sbjct: 565 RGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKTGFWQVKMAEESIE 624

Query: 534 WTAFICPHGHYEWLAMPFGLKNAVCL 611
           WTAF CP GHYEWL MP GLKNA  L
Sbjct: 625 WTAFTCPQGHYEWLVMPLGLKNAPAL 650



 Score = 64.3 bits (155), Expect(2) = 1e-32
 Identities = 32/80 (40%), Positives = 49/80 (61%)
 Frame = +1

Query: 121 KAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLIIPSPDTAEEYKK 300
           K  I  ++ +LE++Q IG      W+K+ + C++ IINP++ I+   I  +P   EE+K 
Sbjct: 473 KKDIEKIVQRLEDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFKM 532

Query: 301 HIDELLALIVIRPSNSHHRA 360
           HI+ELL L  IR S S HR+
Sbjct: 533 HIEELLKLGAIRESRSPHRS 552


>gb|ABG66247.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 764

 Score =  103 bits (258), Expect(2) = 1e-32
 Identities = 49/86 (56%), Positives = 59/86 (68%)
 Frame = +3

Query: 354 QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
           +GKS+MV +YKRLNDN  +D Y +P     + +I+  K FSKFDLK+ F  V M  +SI 
Sbjct: 231 RGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIE 290

Query: 534 WTAFICPHGHYEWLAMPFGLKNAVCL 611
           WTAF CP GHYEWL MP GLKNA  L
Sbjct: 291 WTAFTCPQGHYEWLVMPLGLKNAPAL 316



 Score = 64.3 bits (155), Expect(2) = 1e-32
 Identities = 32/80 (40%), Positives = 49/80 (61%)
 Frame = +1

Query: 121 KAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLIIPSPDTAEEYKK 300
           K  I  ++ +LE++Q IG      W+K+ + C++ IINP++ I+   I  +P   EE+K 
Sbjct: 139 KKDIEKIVQRLEDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFKM 198

Query: 301 HIDELLALIVIRPSNSHHRA 360
           HI+ELL L  IR S S HR+
Sbjct: 199 HIEELLKLGAIRESRSPHRS 218


>tpd|FAA01208.1| TPA: orf y [Oryza sativa Japonica Group]
          Length = 1718

 Score =  103 bits (256), Expect(2) = 2e-32
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = +3

Query: 354  QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
            +GKS+MV +YKRLNDN  +D Y +P     + +I+  K FSKFDLK+ F  V M  +SI 
Sbjct: 1336 RGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIE 1395

Query: 534  WTAFICPHGHYEWLAMPFGLKNA 602
            WTAF CP GHYEWL MP GLKNA
Sbjct: 1396 WTAFTCPQGHYEWLVMPLGLKNA 1418



 Score = 64.7 bits (156), Expect(2) = 2e-32
 Identities = 32/80 (40%), Positives = 49/80 (61%)
 Frame = +1

Query: 121  KAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLIIPSPDTAEEYKK 300
            K  I  ++ +LE++Q IG      W+K+ + C++ IINP++ I+   I  +P   EE+K 
Sbjct: 1244 KRDIEKIIQRLEDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFKM 1303

Query: 301  HIDELLALIVIRPSNSHHRA 360
            HI+ELL L  IR S S HR+
Sbjct: 1304 HIEELLKLGAIRESRSPHRS 1323


>tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1718

 Score =  103 bits (256), Expect(2) = 2e-32
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = +3

Query: 354  QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
            +GKS+MV +YKRLNDN  +D Y +P     + +I+  K FSKFDLK+ F  V M  +SI 
Sbjct: 1336 RGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIE 1395

Query: 534  WTAFICPHGHYEWLAMPFGLKNA 602
            WTAF CP GHYEWL MP GLKNA
Sbjct: 1396 WTAFTCPQGHYEWLVMPLGLKNA 1418



 Score = 64.7 bits (156), Expect(2) = 2e-32
 Identities = 32/80 (40%), Positives = 49/80 (61%)
 Frame = +1

Query: 121  KAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLIIPSPDTAEEYKK 300
            K  I  ++ +LE++Q IG      W+K+ + C++ IINP++ I+   I  +P   EE+K 
Sbjct: 1244 KRDIEKIIQRLEDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFKM 1303

Query: 301  HIDELLALIVIRPSNSHHRA 360
            HI+ELL L  IR S S HR+
Sbjct: 1304 HIEELLKLGAIRESRSPHRS 1323


>tpd|FAA01199.1| TPA: orf y [Oryza sativa Japonica Group]
          Length = 1711

 Score =  103 bits (258), Expect(2) = 2e-32
 Identities = 49/86 (56%), Positives = 59/86 (68%)
 Frame = +3

Query: 354  QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
            +GKS+MV +YKRLNDN  +D Y +P     + +I+  K FSKFDLK+ F  V M  +SI 
Sbjct: 1329 RGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIE 1388

Query: 534  WTAFICPHGHYEWLAMPFGLKNAVCL 611
            WTAF CP GHYEWL MP GLKNA  L
Sbjct: 1389 WTAFTCPQGHYEWLVMPLGLKNAPAL 1414



 Score = 63.5 bits (153), Expect(2) = 2e-32
 Identities = 31/80 (38%), Positives = 49/80 (61%)
 Frame = +1

Query: 121  KAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLIIPSPDTAEEYKK 300
            K  I  ++ +LE++Q IG      W+K+ + C++ I+NP++ I+   I  +P   EE+K 
Sbjct: 1237 KKDIEKIVQRLEDIQIIGEIPMKYWEKNAIECKINILNPEYIIKTSPIEATPKDIEEFKM 1296

Query: 301  HIDELLALIVIRPSNSHHRA 360
            HI+ELL L  IR S S HR+
Sbjct: 1297 HIEELLKLGAIRESRSPHRS 1316


>tpd|FAA01211.1| TPA: orf y [Oryza sativa Japonica Group]
          Length = 1710

 Score =  102 bits (255), Expect(2) = 2e-32
 Identities = 47/83 (56%), Positives = 58/83 (69%)
 Frame = +3

Query: 354  QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
            +GKS+MV +YKRLNDN  +D Y +P     + +I+  K FSKFDLK+ F  + M  +SI 
Sbjct: 1328 RGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQIKMAEESIE 1387

Query: 534  WTAFICPHGHYEWLAMPFGLKNA 602
            WTAF CP GHYEWL MP GLKNA
Sbjct: 1388 WTAFTCPQGHYEWLVMPLGLKNA 1410



 Score = 64.7 bits (156), Expect(2) = 2e-32
 Identities = 32/80 (40%), Positives = 49/80 (61%)
 Frame = +1

Query: 121  KAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLIIPSPDTAEEYKK 300
            K  I  ++ +LE++Q IG      W+K+ + C++ IINP++ I+   I  +P   EE+K 
Sbjct: 1236 KRDIEKIIQRLEDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFKM 1295

Query: 301  HIDELLALIVIRPSNSHHRA 360
            HI+ELL L  IR S S HR+
Sbjct: 1296 HIEELLKLGAIRESRSPHRS 1315


>gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 792

 Score =  103 bits (258), Expect(2) = 2e-32
 Identities = 49/86 (56%), Positives = 59/86 (68%)
 Frame = +3

Query: 354 QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
           +GKS+MV +YKRLNDN  +D Y +P     + +I+  K FSKFDLK+ F  V M  +SI 
Sbjct: 231 RGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIE 290

Query: 534 WTAFICPHGHYEWLAMPFGLKNAVCL 611
           WTAF CP GHYEWL MP GLKNA  L
Sbjct: 291 WTAFTCPQGHYEWLVMPLGLKNAPAL 316



 Score = 63.5 bits (153), Expect(2) = 2e-32
 Identities = 31/80 (38%), Positives = 49/80 (61%)
 Frame = +1

Query: 121 KAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLIIPSPDTAEEYKK 300
           K  I  ++ +LE++Q IG      W+K+ + C++ I+NP++ I+   I  +P   EE+K 
Sbjct: 139 KKDIEKIVQRLEDIQIIGEIPMKYWEKNAIECKINILNPEYIIKTSPIEATPKDIEEFKM 198

Query: 301 HIDELLALIVIRPSNSHHRA 360
           HI+ELL L  IR S S HR+
Sbjct: 199 HIEELLKLGAIRESRSPHRS 218


>tpd|FAA01205.1| TPA: orf y [Oryza sativa Japonica Group]
          Length = 1718

 Score =  103 bits (256), Expect(2) = 3e-32
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = +3

Query: 354  QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
            +GKS+MV +YKRLNDN  +D Y +P     + +I+  K FSKFDLK+ F  V M  +SI 
Sbjct: 1336 RGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIE 1395

Query: 534  WTAFICPHGHYEWLAMPFGLKNA 602
            WTAF CP GHYEWL MP GLKNA
Sbjct: 1396 WTAFTCPQGHYEWLVMPLGLKNA 1418



 Score = 63.9 bits (154), Expect(2) = 3e-32
 Identities = 32/80 (40%), Positives = 48/80 (60%)
 Frame = +1

Query: 121  KAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLIIPSPDTAEEYKK 300
            K  I  ++ +LE++Q IG      W K+ + C++ IINP++ I+   I  +P   EE+K 
Sbjct: 1244 KRDIEKIIQRLEDIQIIGEIPMKYWXKNAIECKINIINPEYIIKTSPIEATPKDIEEFKM 1303

Query: 301  HIDELLALIVIRPSNSHHRA 360
            HI+ELL L  IR S S HR+
Sbjct: 1304 HIEELLKLGAIRESRSPHRS 1323


>tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1718

 Score =  103 bits (256), Expect(2) = 3e-32
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = +3

Query: 354  QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
            +GKS+MV +YKRLNDN  +D Y +P     + +I+  K FSKFDLK+ F  V M  +SI 
Sbjct: 1336 RGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIE 1395

Query: 534  WTAFICPHGHYEWLAMPFGLKNA 602
            WTAF CP GHYEWL MP GLKNA
Sbjct: 1396 WTAFTCPQGHYEWLVMPLGLKNA 1418



 Score = 63.9 bits (154), Expect(2) = 3e-32
 Identities = 32/80 (40%), Positives = 48/80 (60%)
 Frame = +1

Query: 121  KAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLIIPSPDTAEEYKK 300
            K  I  ++ +LE++Q IG      W K+ + C++ IINP++ I+   I  +P   EE+K 
Sbjct: 1244 KRDIEKIIQRLEDIQIIGEIPXKYWXKNAIECKINIINPEYIIKTSPIEATPKDIEEFKM 1303

Query: 301  HIDELLALIVIRPSNSHHRA 360
            HI+ELL L  IR S S HR+
Sbjct: 1304 HIEELLKLGAIRESRSPHRS 1323


>gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 730

 Score =  103 bits (256), Expect(2) = 5e-32
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = +3

Query: 354 QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
           +GKS+MV +YKRLNDN  +D Y +P     + +I+  K FSKFDLK+ F  V M  +SI 
Sbjct: 169 RGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIE 228

Query: 534 WTAFICPHGHYEWLAMPFGLKNA 602
           WTAF CP GHYEWL MP GLKNA
Sbjct: 229 WTAFTCPQGHYEWLVMPLGLKNA 251



 Score = 63.2 bits (152), Expect(2) = 5e-32
 Identities = 31/80 (38%), Positives = 49/80 (61%)
 Frame = +1

Query: 121 KAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLIIPSPDTAEEYKK 300
           K  I  ++ +LE++Q IG      W+K+ + C++ IINP++ I+   I  +P   +E+K 
Sbjct: 77  KRDIEKIIQRLEDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIKEFKM 136

Query: 301 HIDELLALIVIRPSNSHHRA 360
           HI+ELL L  IR S S HR+
Sbjct: 137 HIEELLKLGAIRESRSPHRS 156


>emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group]
 emb|CAH67571.1| H0315A08.1 [Oryza sativa]
          Length = 685

 Score =  101 bits (251), Expect(2) = 1e-31
 Identities = 47/83 (56%), Positives = 58/83 (69%)
 Frame = +3

Query: 354 QGKSKMVYSYKRLNDNMYKDQYTLPGIDYLLLKIKNKKIFSKFDLKSRFH*VAMDPKSIP 533
           +GKS+MV +YKRLN+N  +D Y +P     + +I+  K FSKFDLK+ F  V M  +SI 
Sbjct: 231 RGKSRMVINYKRLNNNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIE 290

Query: 534 WTAFICPHGHYEWLAMPFGLKNA 602
           WTAF CP GHYEWL MP GLKNA
Sbjct: 291 WTAFTCPQGHYEWLVMPLGLKNA 313



 Score = 63.5 bits (153), Expect(2) = 1e-31
 Identities = 32/80 (40%), Positives = 48/80 (60%)
 Frame = +1

Query: 121 KAGILPLLYQLENLQYIGSDSAVAWKKSKVLCRLEIINPDFTIQDKLIIPSPDTAEEYKK 300
           K  I  ++ +LE++Q IG      W K+ + C++ IINP++ I+   I  +P   EE+K 
Sbjct: 139 KRDIEKIIQRLEDIQIIGEIPIKYWGKNAIECKINIINPEYIIKTSPIEATPKDIEEFKM 198

Query: 301 HIDELLALIVIRPSNSHHRA 360
           HI+ELL L  IR S S HR+
Sbjct: 199 HIEELLKLGAIRESRSPHRS 218