BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00053555
         (622 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009419409.1| PREDICTED: protein MKS1-like [Musa acuminata...    59   6e-07
ref|XP_009420191.2| PREDICTED: nuclear speckle RNA-binding prote...    59   7e-07
gb|OAY65457.1| Nuclear speckle RNA-binding protein B [Ananas com...    57   3e-06

>ref|XP_009419409.1| PREDICTED: protein MKS1-like [Musa acuminata subsp. malaccensis]
          Length = 243

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 50/141 (35%), Positives = 61/141 (43%), Gaps = 29/141 (20%)
 Frame = -2

Query: 600 QVFSPAARLAIFEKSRAPAAGK------------------VDDAVARTDGVRAGMAAGIL 475
           ++FSPAARLA FEK+   A                     +D A A T    AG  AGIL
Sbjct: 109 KLFSPAARLATFEKTAQTAHASSGERLTKGEQNLAEVLLGIDGAGASTLDRSAGPFAGIL 168

Query: 474 SPVPSSLPRIPADYFTS-----------GDVSPTATSRRFMEMMSNFSPSTPDDYNNLLC 328
           SP+PSSLP I  D F S            ++SP   S R    +++F PS     NN L 
Sbjct: 169 SPIPSSLPCISPDLFASSTAQQHQINFFNELSPAIQSNRSFMGINSFFPSP----NNFL- 223

Query: 327 XXXXXXXXXXXAYWDLFKQLQ 265
                      +YWDLF Q Q
Sbjct: 224 --SSGIVPSPASYWDLFNQYQ 242


>ref|XP_009420191.2| PREDICTED: nuclear speckle RNA-binding protein B-like isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 229

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 49/132 (37%), Positives = 63/132 (47%), Gaps = 17/132 (12%)
 Frame = -2

Query: 606 TGQVFSPAARLAIFEKSRAPAAGKVDDAVARTDGVRAGMAA------GILSPVPSSLPRI 445
           TG+VFSPAAR A+FEK   PA G +   +  T G  + +        GILSPVPSSLP I
Sbjct: 107 TGEVFSPAARFAVFEK---PAQGAISADLLGTGGGTSTLDRPSASFHGILSPVPSSLPWI 163

Query: 444 PADYFTS----------GDVSPTA-TSRRFMEMMSNFSPSTPDDYNNLLCXXXXXXXXXX 298
             + F S           ++SP     R F E ++ F PS P ++               
Sbjct: 164 SPNLFASSTGQTQISFVNELSPAIHGGRSFPETINCFMPS-PSNF------LSGGMVPSP 216

Query: 297 XAYWDLFKQLQD 262
            A+WDLF Q QD
Sbjct: 217 AAFWDLFNQYQD 228


>gb|OAY65457.1| Nuclear speckle RNA-binding protein B [Ananas comosus]
          Length = 249

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 48/141 (34%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
 Frame = -2

Query: 603 GQVFSPAARLAIFEKS-------RAPAAGKVDDAVARTDGV----------RAGMAAGIL 475
           G+  SPAARLA+ E+        R     +VD AV   D +          R G   GIL
Sbjct: 111 GEALSPAARLAVIERPQGRVVTPRGNMTSQVDGAVDVLDQLGFQGGARLLDRTGSFPGIL 170

Query: 474 SPVPSSLPRIPADYFTSGDVSPTATSRRFMEMMS----NFSPSTPDDYNNLLC------X 325
           SPVPS+LP IP ++F+S    P   S  F+  +S     F+ S     NN +        
Sbjct: 171 SPVPSTLPAIPPNFFSS---LPEMNSLNFLHELSPAFHTFNKSNISTENNNMAMVSPSFF 227

Query: 324 XXXXXXXXXXAYWDLFKQLQD 262
                     AYWDLF+Q QD
Sbjct: 228 LTTPFAPSPNAYWDLFQQYQD 248