BLASTX nr result

ID: Cheilocostus21_contig00053509 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00053509
         (504 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009420741.1| PREDICTED: myb-related protein Myb4-like [Mu...    80   1e-14

>ref|XP_009420741.1| PREDICTED: myb-related protein Myb4-like [Musa acuminata subsp.
           malaccensis]
          Length = 308

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 61/173 (35%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
 Frame = +2

Query: 14  PSIIVTSTNPSAFEHLEPQAAAVFSTAD-----LNPNFXXXXXXXXXXXXXXCSLFMFDV 178
           PS    +  PS F+H++P    VFSTAD     L+ N               C LFMFDV
Sbjct: 119 PSKAAQTATPSGFDHVQP----VFSTADQFDAILHHNLPKPSAADPIFPPPPCPLFMFDV 174

Query: 179 GGANDGSIGPAARSSDQEPQLVHDQVSCGLWS-TSQGEAITPQQPFLAFHPCMDSDYFTA 355
              + GS   A  S+ +E       ++  LW+ T Q +   P  PFLAF  CM+S+Y   
Sbjct: 175 SAGDSGS---ATGSTKEEFVQEVTTLTSDLWNPTHQQDQAMP--PFLAFTACMESNYLPP 229

Query: 356 AA---ASPVAGTVGTDGYGKINP---SELSEWVDARQCSSSLIWENIQGLNIG 496
                   V   V  D     +P    ELSEWVD+RQ SS LIW+ + G ++G
Sbjct: 230 LVDGMGGMVPCCVADDEEASRHPFEKQELSEWVDSRQYSSPLIWDQVAGTSLG 282


Top