BLASTX nr result

ID: Cheilocostus21_contig00053330 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00053330
         (428 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009395153.1| PREDICTED: uncharacterized protein LOC103980...    64   5e-09

>ref|XP_009395153.1| PREDICTED: uncharacterized protein LOC103980421 [Musa acuminata
           subsp. malaccensis]
          Length = 339

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 43/91 (47%), Positives = 47/91 (51%), Gaps = 24/91 (26%)
 Frame = +1

Query: 112 PINHHNH------LPSFSCHFSPA----------LGMRRTRSDGNLQSL---HVDDPRHH 234
           P N H H      L + SCHFSPA          LG+RR+RSDGNL S      DDP HH
Sbjct: 28  PNNFHPHNSPNPNLHTLSCHFSPASDGLHDQSPSLGIRRSRSDGNLHSFLSDQSDDPNHH 87

Query: 235 T----PIAKCSS-RRAYPGFGRIPSFSFYKP 312
                P  KCSS RRA+P    IPSFS   P
Sbjct: 88  NHLLPPSLKCSSARRAHPALESIPSFSSRNP 118


Top