BLASTX nr result

ID: Cheilocostus21_contig00053199 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00053199
         (791 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013728373.1| uncharacterized protein LOC106432076 [Brassi...    48   1e-08
ref|XP_023733910.1| uncharacterized protein LOC111881751 [Lactuc...    46   4e-08
ref|XP_018515146.1| PREDICTED: uncharacterized protein LOC108872...    47   5e-08
ref|XP_013650404.1| uncharacterized protein LOC106354909 [Brassi...    49   3e-07
ref|XP_023766572.1| uncharacterized protein LOC111915118 [Lactuc...    43   6e-07
ref|XP_023741120.1| uncharacterized protein LOC111889220 [Lactuc...    44   7e-07
ref|XP_018448764.1| PREDICTED: uncharacterized protein LOC108820...    48   8e-07
ref|XP_023744750.1| uncharacterized protein LOC111892902 [Lactuc...    47   1e-06
ref|XP_013665452.1| uncharacterized protein LOC106369908 [Brassi...    44   1e-06
gb|OWM90669.1| hypothetical protein CDL15_Pgr020974 [Punica gran...    49   1e-06
ref|XP_024011401.1| uncharacterized protein LOC112086661 [Eutrem...    44   2e-06
ref|XP_019085551.1| PREDICTED: uncharacterized protein LOC109126...    47   2e-06
ref|XP_013608326.1| PREDICTED: uncharacterized protein LOC106315...    47   2e-06
ref|XP_022566288.1| uncharacterized protein LOC111210284 [Brassi...    47   2e-06
ref|XP_023758563.1| uncharacterized protein LOC111907005 [Lactuc...    43   3e-06
ref|XP_013617536.1| PREDICTED: uncharacterized protein LOC106324...    47   3e-06
ref|XP_018479921.1| PREDICTED: uncharacterized protein LOC108850...    51   3e-06
ref|XP_013601463.1| PREDICTED: uncharacterized protein LOC106308...    41   4e-06
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    42   5e-06
dbj|GAV83549.1| zf-RVT domain-containing protein [Cephalotus fol...    40   5e-06

>ref|XP_013728373.1| uncharacterized protein LOC106432076 [Brassica napus]
          Length = 257

 Score = 48.1 bits (113), Expect(2) = 1e-08
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
 Frame = +2

Query: 140 GITTRKGCCFHNLGDESIDRLFFECHVTNKLLKALQEVLE-INVGFDCWSKMLVMISTKW 316
           G+ T   CC  +  D+S D +F EC  T +L + +Q  L      FD W ++L   S   
Sbjct: 130 GMLTPISCCLCSSSDKSRDHIFAECDFTKELWRRMQAKLSGTTTTFDSWPQLLAWCSQ-- 187

Query: 317 NVDNSLNTIRKLLL-TVVYHIWIE 385
           NV  S   +R + + +++Y+IW E
Sbjct: 188 NVSKSQRALRNIAVQSIIYNIWAE 211



 Score = 40.0 bits (92), Expect(2) = 1e-08
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +3

Query: 36  WYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKW 140
           W+K+VWF+G IP+ +F   +  L+RL T N L  W
Sbjct: 95  WHKMVWFKGHIPKHAFTMWVSVLDRLPTRNRLASW 129


>ref|XP_023733910.1| uncharacterized protein LOC111881751 [Lactuca sativa]
          Length = 476

 Score = 46.2 bits (108), Expect(2) = 4e-08
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = +2

Query: 161 CCFHNLGDESIDRLFFECHVTNKLLKALQEVLEINVGFDCWSKMLVMISTKWNVDNSLNT 340
           C F NL  +S D LFF C  +  + +   + + +N+    W+++++     W  D   N 
Sbjct: 345 CPFCNLIPDSHDHLFFNCEFSQSIWRHFCDKMRLNLVMGSWNELILKCCNLWYKDTGENL 404

Query: 341 IRK-LLLTVVYHIWIE 385
           I K +L + V HIW E
Sbjct: 405 INKCILASCVAHIWKE 420



 Score = 40.0 bits (92), Expect(2) = 4e-08
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +3

Query: 30  IPWYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKWE 143
           +PW ++VW+   IPR SFI  +  LNRL T + +  WE
Sbjct: 301 VPWKEIVWYGKGIPRNSFILWMAILNRLKTQDRVRVWE 338


>ref|XP_018515146.1| PREDICTED: uncharacterized protein LOC108872236 [Brassica rapa]
          Length = 1576

 Score = 47.0 bits (110), Expect(2) = 5e-08
 Identities = 18/40 (45%), Positives = 27/40 (67%)
 Frame = +3

Query: 30   IPWYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKWELQ 149
            +PW+K +WF G  P+FSF+T L   NRL+T + + +W  Q
Sbjct: 1409 VPWFKAIWFPGATPKFSFLTWLAAHNRLATGDRILRWNPQ 1448



 Score = 38.9 bits (89), Expect(2) = 5e-08
 Identities = 25/76 (32%), Positives = 35/76 (46%)
 Frame = +2

Query: 158  GCCFHNLGDESIDRLFFECHVTNKLLKALQEVLEINVGFDCWSKMLVMISTKWNVDNSLN 337
            GC   N G ES D LFFEC  + ++L+   + L I V    WS +L  +   +    +  
Sbjct: 1452 GCWLCNSGMESRDHLFFECAFSAEVLQGTIKGLVIGVTVQ-WSPLLQCLVNGFQDRTTTF 1510

Query: 338  TIRKLLLTVVYHIWIE 385
             +R     V Y IW E
Sbjct: 1511 LVRYCFQAVAYAIWYE 1526


>ref|XP_013650404.1| uncharacterized protein LOC106354909 [Brassica napus]
 ref|XP_013694977.1| uncharacterized protein LOC106399045 [Brassica napus]
          Length = 1651

 Score = 48.9 bits (115), Expect(2) = 3e-07
 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
 Frame = +2

Query: 140  GITTRKGCCFHNLGDESIDRLFFECHVTNKL-LKALQEVLEINVGFDCWSKMLVMISTKW 316
            G+ T   CC  +L DES D LF EC  +  +  + LQ++   +  FD W++ML   S   
Sbjct: 1524 GMLTPTSCCLCSLSDESRDHLFIECPFSKDIWRRMLQKLFPTSPMFDSWAQMLNWPSLAP 1583

Query: 317  NVDNSLNTIRKLLL-TVVYHIWIE 385
            N   S+ T+R + +  ++Y++W E
Sbjct: 1584 N--QSMRTLRGIAVQVIIYNLWTE 1605



 Score = 34.3 bits (77), Expect(2) = 3e-07
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 36   WYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKW 140
            W+K VWF+G  P+ +F   +   +RL T N L  W
Sbjct: 1489 WFKAVWFKGNTPKHAFHMWVAVHDRLPTRNRLAAW 1523


>ref|XP_023766572.1| uncharacterized protein LOC111915118 [Lactuca sativa]
          Length = 228

 Score = 43.1 bits (100), Expect(2) = 6e-07
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = +3

Query: 30  IPWYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKWE 143
           + WY LVWFQ RIP   FI  L  L RL T + +++W+
Sbjct: 48  VDWYDLVWFQNRIPSHCFILWLAILGRLRTQDRMKRWK 85



 Score = 39.3 bits (90), Expect(2) = 6e-07
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +2

Query: 161 CCFHNLGDESIDRLFFECHVTNKLLKALQEVLEINVGFDCWSKMLVMISTKWNVDNSLNT 340
           C F N   +S   LFF+C+ + ++   ++  +EI      W ++++ +       N  N 
Sbjct: 92  CVFCNAQMDSHSHLFFDCNYSKEVWNLMKNKVEIKHCPGNWFEIIIELQYSLKKKNISNF 151

Query: 341 IRK-LLLTVVYHIWIE 385
           I+K  L   VYHIW E
Sbjct: 152 IKKTALAATVYHIWNE 167


>ref|XP_023741120.1| uncharacterized protein LOC111889220 [Lactuca sativa]
          Length = 1211

 Score = 44.3 bits (103), Expect(2) = 7e-07
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +3

Query: 30   IPWYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKWEL 146
            +PWY +VW+   IPR SFI  +  LNRL T + +  WE+
Sbjct: 1042 VPWYDIVWYNNCIPRNSFILWMAVLNRLKTQDRVRGWEV 1080



 Score = 37.7 bits (86), Expect(2) = 7e-07
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = +2

Query: 161  CCFHNLGDESIDRLFFECHVTNKLLKALQEVLEINVGFDCWSKMLVMISTKWNVDNSLNT 340
            C F  +  +S + LFF C  T+++ +     + +N+    W+ +++M+S   N+    N 
Sbjct: 1086 CPFCEIVPDSHNHLFFNCDYTSRIWRYFCIKVGLNLKTVEWNDLILMLSRMLNLKTGENL 1145

Query: 341  IRK-LLLTVVYHIWIE 385
            I K ++ + V HIW E
Sbjct: 1146 IIKCMIASCVSHIWRE 1161


>ref|XP_018448764.1| PREDICTED: uncharacterized protein LOC108820299 [Raphanus sativus]
          Length = 339

 Score = 48.1 bits (113), Expect(2) = 8e-07
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
 Frame = +2

Query: 140 GITTRKGCCFHNLGDESIDRLFFECHVTNKLLK-ALQEVLEINVGFDCWSKMLVMISTKW 316
           GI T   CC     DE+ D LF +C  T  + K  L  + E   GFD W+ +L      W
Sbjct: 212 GILTPLTCCLCLAADETRDHLFIDCSFTKDIWKMMLLRLSESRQGFDSWNHLLA-----W 266

Query: 317 NVDNSLNTIRKL----LLTVVYHIWIE 385
               S  +IR L    + T++Y +WIE
Sbjct: 267 YTSVSSKSIRALRGIAVQTIIYSLWIE 293



 Score = 33.9 bits (76), Expect(2) = 8e-07
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 36  WYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKW 140
           WY  +WF+G IP+ +F   +   +RL T   L  W
Sbjct: 177 WYSAIWFKGHIPKHAFTMWVAVQDRLPTRCRLSSW 211


>ref|XP_023744750.1| uncharacterized protein LOC111892902 [Lactuca sativa]
          Length = 990

 Score = 46.6 bits (109), Expect(2) = 1e-06
 Identities = 20/39 (51%), Positives = 26/39 (66%)
 Frame = +3

Query: 27  SIPWYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKWE 143
           ++ WY LVWFQ RIP   FI  L  L RL T +I++KW+
Sbjct: 811 NVGWYDLVWFQQRIPNHCFILWLAILGRLRTQDIMKKWK 849



 Score = 34.7 bits (78), Expect(2) = 1e-06
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
 Frame = +2

Query: 131  RKMGITTRKGCCFHNLGDESIDRLFFECHVTNKLLKALQEVLEINVGFDCWSKMLVMIST 310
            +K   T    C F N   +S   +FFEC+   ++   ++  L I      W +++  +  
Sbjct: 846  KKWKSTCNFSCAFCNKQSDSHCHIFFECNFPQEVWSKVKRNLNITHKDGNWFEIIQDLQG 905

Query: 311  KWNVDNSLNTIRK-LLLTVVYHIWIE 385
                 N  N I+K  L   +YH+W E
Sbjct: 906  TLKRKNIENFIKKCALAATIYHLWNE 931


>ref|XP_013665452.1| uncharacterized protein LOC106369908 [Brassica napus]
          Length = 267

 Score = 44.3 bits (103), Expect(2) = 1e-06
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +3

Query: 27  SIPWYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKWELQ 149
           +IPWYK VWF G  P++S ++ +   NRL+T + L +W  Q
Sbjct: 100 TIPWYKGVWFSGATPKYSVLSWIAAHNRLATEDRLLQWNAQ 140



 Score = 37.0 bits (84), Expect(2) = 1e-06
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = +2

Query: 161 CCFHNLGDESIDRLFFECHVTNKLLKAL-QEVLEINVGFDCWSKMLVMISTKWNVDNSLN 337
           C F N   E+ D LFF CH + ++ + L +++L     ++ WS++L ++S       +  
Sbjct: 145 CVFCNYVVETRDHLFFGCHYSEEIWRNLTRKLLGQRYTYE-WSRVLELVSANVLSTTNQY 203

Query: 338 TIRKLLLTVVYHIWIE 385
            +R +   +V+ IWIE
Sbjct: 204 LLRYVFQALVHTIWIE 219


>gb|OWM90669.1| hypothetical protein CDL15_Pgr020974 [Punica granatum]
          Length = 183

 Score = 48.9 bits (115), Expect(2) = 1e-06
 Identities = 19/37 (51%), Positives = 28/37 (75%)
 Frame = +3

Query: 30  IPWYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKW 140
           + W+KL+WF G +PR SFI  L  L+RL+T ++L+KW
Sbjct: 37  VEWHKLIWFFGHVPRASFICWLALLDRLTTTDMLKKW 73



 Score = 32.3 bits (72), Expect(2) = 1e-06
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +2

Query: 161 CCFHNLGDESIDRLFFECHVTNKLLKALQEVLEINVGFDCWSKMLVMISTKWNVDNSLNT 340
           CCF  + +E+   L F C  T  + + ++ +L +      W K     + +W        
Sbjct: 82  CCFCQMEEENRSHLSFTCSFTKSIWEKIRNILFLAGPTGDWDKE-YNEALEWKGKKLETI 140

Query: 341 IRKLLLTV-VYHIWIE 385
           I+KL  TV +Y +W E
Sbjct: 141 IKKLAWTVYIYIVWSE 156


>ref|XP_024011401.1| uncharacterized protein LOC112086661 [Eutrema salsugineum]
          Length = 304

 Score = 43.9 bits (102), Expect(2) = 2e-06
 Identities = 17/42 (40%), Positives = 29/42 (69%)
 Frame = +3

Query: 27  SIPWYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKWELQL 152
           ++PW++++WF+  +PR+SF T L  L RL T + L +W L +
Sbjct: 124 AVPWHRVLWFKENVPRWSFTTWLAFLARLPTKDRLRQWGLNV 165



 Score = 37.0 bits (84), Expect(2) = 2e-06
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
 Frame = +2

Query: 131 RKMGITTRKGCCFHNLGDESIDRLFFECHVTNKLLKALQEVLEINVGFDCWSKMLVMIST 310
           R+ G+     C   + G+ES   LFF+C  +  + K   E + IN   D  S    + + 
Sbjct: 159 RQWGLNVSAECVLCSRGNESHGHLFFDCQFSATVWKRFVEPIRINPPLDISSAASWISNH 218

Query: 311 KWNVDNSLNTIRKLLL-TVVYHIWIE 385
               + S  T+ K++L  +VY IW E
Sbjct: 219 LHGSNRSHATLVKVILQALVYSIWKE 244


>ref|XP_019085551.1| PREDICTED: uncharacterized protein LOC109126452 [Camelina sativa]
          Length = 297

 Score = 46.6 bits (109), Expect(2) = 2e-06
 Identities = 17/41 (41%), Positives = 28/41 (68%)
 Frame = +3

Query: 30  IPWYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKWELQL 152
           +PW +++WF+  +PR+SFI  L  LNRL T + L +W + +
Sbjct: 125 VPWSEVIWFKEHVPRYSFIAWLAMLNRLPTRDRLRRWGMNI 165



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
 Frame = +2

Query: 131 RKMGITTRKGCCFHNLGDESIDRLFFECHVTNKLLKALQEVLEINVGFDCWSKMLVMIST 310
           R+ G+     C   + G+E  + LFFEC  ++ L     E    N          +  ++
Sbjct: 159 RRWGMNIPATCVLCSNGEEDHNHLFFECSFSSGLWTFFAEKFPPN------PPATLAAAS 212

Query: 311 KWNVDNS------LNTIRKLLL-TVVYHIWIE 385
            W + +S      + TI KLL  +VVYH+W E
Sbjct: 213 SWILHHSQPHLRRIKTILKLLFQSVVYHLWKE 244


>ref|XP_013608326.1| PREDICTED: uncharacterized protein LOC106315102 [Brassica oleracea
           var. oleracea]
          Length = 216

 Score = 46.6 bits (109), Expect(2) = 2e-06
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
 Frame = +2

Query: 140 GITTRKGCCFHNLGDESIDRLFFECHVTNKL-LKALQEVLEINVGFDCWSKMLVMISTKW 316
           G+ T   CC  +L DES D LF EC  +  +  + LQ++   +  FD W++ML   S   
Sbjct: 89  GMLTPTSCCLCSLSDESRDHLFIECPFSKDIWRRMLQKLSPTSPMFDSWAQMLNWPSLA- 147

Query: 317 NVDNSLNTIRKLLL-TVVYHIWIE 385
               S+ T+R + +  ++Y++W E
Sbjct: 148 -PSQSMRTLRGIAVQVIIYNLWTE 170



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 36  WYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKW 140
           W+K VWF+G  P+ +F   +   +RL T N L  W
Sbjct: 54  WFKAVWFKGNTPKHAFHMWVTVHDRLPTRNRLAAW 88


>ref|XP_022566288.1| uncharacterized protein LOC111210284 [Brassica napus]
          Length = 294

 Score = 47.4 bits (111), Expect(2) = 2e-06
 Identities = 21/40 (52%), Positives = 26/40 (65%)
 Frame = +3

Query: 27  SIPWYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKWEL 146
           S  W K VWF    P+FSFIT L  LNRL+T++ + KW L
Sbjct: 126 SCSWAKGVWFSNATPKFSFITWLAVLNRLATMDRISKWSL 165



 Score = 33.1 bits (74), Expect(2) = 2e-06
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +2

Query: 185 ESIDRLFFECHVTNKLLKALQEVLEINVGFDCWSKMLVMISTKWNVDNSLNTIRKLLLTV 364
           E+ D LFF+C  +++L K L   +  N   + WS ++ ++S       S   +R      
Sbjct: 179 ETRDHLFFQCDYSSQLWKQLTLGILRNAHSNSWSAIIHLLSDNSRGVKSTFCVRYSFQAA 238

Query: 365 VYHIWIE 385
           +Y +W E
Sbjct: 239 IYALWRE 245


>ref|XP_023758563.1| uncharacterized protein LOC111907005 [Lactuca sativa]
          Length = 308

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = +3

Query: 30  IPWYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKWE 143
           + WY LVWFQ RIP   FI  L  L RL T + +++W+
Sbjct: 128 VDWYDLVWFQNRIPSHCFILWLAILGRLRTQDRMKRWK 165



 Score = 37.0 bits (84), Expect(2) = 3e-06
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +2

Query: 161 CCFHNLGDESIDRLFFECHVTNKLLKALQEVLEINVGFDCWSKMLVMISTKWNVDNSLNT 340
           C F N   +S   LFF+C  +  + K ++  ++I      W +++  +       N  N 
Sbjct: 172 CVFCNAQLDSHSHLFFDCKFSKDVWKLMKNKVKIKHNPGNWFEIINELQYLLKKKNISNF 231

Query: 341 IRKLLLTV-VYHIWIE 385
           I+K+ L   VYHIW E
Sbjct: 232 IKKIALAASVYHIWNE 247


>ref|XP_013617536.1| PREDICTED: uncharacterized protein LOC106324058 [Brassica oleracea
           var. oleracea]
          Length = 279

 Score = 47.0 bits (110), Expect(2) = 3e-06
 Identities = 20/37 (54%), Positives = 26/37 (70%)
 Frame = +3

Query: 30  IPWYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKW 140
           +PW KLVWF  R+PR++FIT L   +RLST +   KW
Sbjct: 111 VPWSKLVWFPQRVPRYTFITWLAFRDRLSTGHRTSKW 147



 Score = 33.1 bits (74), Expect(2) = 3e-06
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +2

Query: 155 KGCCFHNLGDESIDRLFFECHVTNKL-LKALQEVLEINVGFDCWSKMLVMISTKWNVDNS 331
           +GC +    DE+ D LFF C  T  L LK +  +       D W   ++ + T      +
Sbjct: 151 QGCLYCGEPDETRDHLFFACPYTYTLWLKVVGNLFGAEPDPD-WGITILRLQTGTYDRIT 209

Query: 332 LNTIRKLLLTVVYHIWIE 385
           L  +R +L   +Y+IW E
Sbjct: 210 LILLRMVLQVTIYYIWRE 227


>ref|XP_018479921.1| PREDICTED: uncharacterized protein LOC108850980 [Raphanus sativus]
          Length = 208

 Score = 51.2 bits (121), Expect(2) = 3e-06
 Identities = 19/38 (50%), Positives = 30/38 (78%)
 Frame = +3

Query: 27  SIPWYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKW 140
           ++PWY+ VWF G IP+ +F++ LV L+RLST +I+ +W
Sbjct: 38  AVPWYRSVWFTGMIPKHAFLSWLVALDRLSTRDIMRRW 75



 Score = 28.9 bits (63), Expect(2) = 3e-06
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
 Frame = +2

Query: 131 RKMGITTRKGCCFHNLGDESIDRLFFECHVTNKLLKALQEVLEINVGFDCWSKMLVMIST 310
           R+ GIT    C      DE    LFF+C  + ++ +     L ++     +   L  IS+
Sbjct: 73  RRWGITVSPMCLLCGSSDECRQHLFFDCSYSQEVWEFFYSRLHLSPP-HLFEDGLRWISS 131

Query: 311 KWNVDNSLNTIRKLLLTV-VYHIWIE 385
               DN++N I +L     VY +W E
Sbjct: 132 P-TQDNNINLILRLSFQASVYLLWKE 156


>ref|XP_013601463.1| PREDICTED: uncharacterized protein LOC106308905 [Brassica oleracea
           var. oleracea]
          Length = 176

 Score = 40.8 bits (94), Expect(2) = 4e-06
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
 Frame = +2

Query: 140 GITTRKGCCFHNLGDESIDRLFFECHVTNKLLKALQEVLEIN-VGFDCWSKMLVMISTKW 316
           G+  +  CCF N  DE+ D LF EC  +  L       L+ N   F  W ++L  +  ++
Sbjct: 49  GLNIQTVCCFCNTHDETRDHLFLECSYSTALWLRFFARLDPNRTAFLSWEELLSWL--RF 106

Query: 317 NVDNSLNTIRKLLL-TVVYHIW 379
           +  ++ +TIRKL   +++Y IW
Sbjct: 107 STASAPSTIRKLATQSMIYIIW 128



 Score = 38.9 bits (89), Expect(2) = 4e-06
 Identities = 19/39 (48%), Positives = 23/39 (58%)
 Frame = +3

Query: 36  WYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKWELQL 152
           W + VWF+G IPR +FI  L  LNRL T   L  W L +
Sbjct: 14  WARSVWFRGAIPRQAFIMWLANLNRLPTKVRLASWGLNI 52


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 41.6 bits (96), Expect(2) = 5e-06
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = +2

Query: 161  CCFHNLGDESIDRLFFECHVTNKLLKAL-QEVLEINVGFDCWSKMLVMISTKWNVDNSLN 337
            C   N  +E+ D LFF C  T+ + +AL Q +L  N   D W+++  ++ T     + L 
Sbjct: 1396 CTLCNNAEETRDHLFFSCQYTSYVWEALTQRLLSTNYSRD-WNRLFTLLCTSNLPRDHLF 1454

Query: 338  TIRKLLLTVVYHIWIE 385
              R +    +YHIW E
Sbjct: 1455 LFRYVFQASIYHIWRE 1470



 Score = 37.7 bits (86), Expect(2) = 5e-06
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +3

Query: 36   WYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKW 140
            WYK VWF    P++SF+  L   NRLST + ++ W
Sbjct: 1354 WYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAW 1388


>dbj|GAV83549.1| zf-RVT domain-containing protein [Cephalotus follicularis]
          Length = 242

 Score = 39.7 bits (91), Expect(2) = 5e-06
 Identities = 19/39 (48%), Positives = 21/39 (53%)
 Frame = +3

Query: 30  IPWYKLVWFQGRIPRFSFITRLVCLNRLSTINILEKWEL 146
           +PW KLVWF  RIP+ SF   L  L    T N L  W L
Sbjct: 117 VPWCKLVWFSKRIPKHSFCLWLTILRAHKTKNKLLNWGL 155



 Score = 39.7 bits (91), Expect(2) = 5e-06
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = +2

Query: 140 GITTRKGCCFHNLGDESIDRLFFECHVTNKLLKALQEVLEINVGFDCWSKMLVMISTKWN 319
           G+ +   C FH  G  SID LF EC  T  + K       I      W + +  +     
Sbjct: 154 GLISSARCVFHCGGSGSIDHLFSECPYTRDIWKDALRRCNIFKNILPWVEQVQWLKAYAR 213

Query: 320 VDNSLNTIRKLLL-TVVYHIWIE 385
            +N    + +L L   VYHIW+E
Sbjct: 214 GNNFPTVLMRLALGATVYHIWLE 236


Top