BLASTX nr result
ID: Cheilocostus21_contig00053014
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cheilocostus21_contig00053014 (630 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_009395218.1| PREDICTED: zinc finger CCCH domain-containin... 71 5e-11 ref|XP_009396540.1| PREDICTED: zinc finger CCCH domain-containin... 59 7e-07 >ref|XP_009395218.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like [Musa acuminata subsp. malaccensis] Length = 293 Score = 70.9 bits (172), Expect = 5e-11 Identities = 55/147 (37%), Positives = 59/147 (40%), Gaps = 27/147 (18%) Frame = +1 Query: 1 RRVCFFAHSPEQLRVVVPTSPKDGGAAXXXXXXXXXXXXXXXXXXXXXXXXXX----VAA 168 RRVCFFAH+PEQLR+V+P SP G V A Sbjct: 157 RRVCFFAHTPEQLRIVLPPSPTSSGKIGVNMFSSPTSTLALLSSPSDGSPPLSPVDDVLA 216 Query: 169 AMRALQLSKVRPGLPFGRA------------PLSEGRRAEA-----------EDWSVDVR 279 AMR LQL KVR LPFG P + GRRA A EDW Sbjct: 217 AMRNLQLGKVRSALPFGTRSGFASPASLESDPATRGRRAAAAVADQSAPRLLEDWGRQEE 276 Query: 280 AXXXXXXXXXXXXGAPDLRWVSELVKD 360 A APDL WVSELVKD Sbjct: 277 AAEP----------APDLAWVSELVKD 293 >ref|XP_009396540.1| PREDICTED: zinc finger CCCH domain-containing protein 2-like [Musa acuminata subsp. malaccensis] Length = 300 Score = 59.3 bits (142), Expect = 7e-07 Identities = 52/141 (36%), Positives = 56/141 (39%), Gaps = 21/141 (14%) Frame = +1 Query: 1 RRVCFFAHSPEQLRVVVPTSP----KDGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAA 168 RRVCFFAHSP QLRVV+P SP KDG V Sbjct: 172 RRVCFFAHSPMQLRVVLPPSPTSPGKDGARVTLSPTSTLAPAPMSPPSDGSSPPVSPVGV 231 Query: 169 -----AMRALQLSKVRPGLP------------FGRAPLSEGRRAEAEDWSVDVRAXXXXX 297 AMR LQLSKV P FG AP++ G R ED + R Sbjct: 232 DEVVKAMRKLQLSKVSSAPPFGTRSGMGFLSAFGSAPVTPGTR---EDEAAKRR------ 282 Query: 298 XXXXXXXGAPDLRWVSELVKD 360 PDL WVSELVKD Sbjct: 283 ---EEEEAVPDLNWVSELVKD 300