BLASTX nr result

ID: Cheilocostus21_contig00052884 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00052884
         (440 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009388705.1| PREDICTED: SCAR-like protein 2 isoform X2 [M...    55   9e-06
ref|XP_009388703.1| PREDICTED: SCAR-like protein 2 isoform X1 [M...    55   9e-06

>ref|XP_009388705.1| PREDICTED: SCAR-like protein 2 isoform X2 [Musa acuminata subsp.
           malaccensis]
          Length = 1107

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
 Frame = -2

Query: 439 GVKPSKPFFIGAMHDSTGDHVSGSTNTGRNLPRYILETQK--HESPTKSDAILSNSGSTN 266
           GV  SKP F+G M++S+ D  SGS N   NLP  IL+T K  + S T SDAI S S S +
Sbjct: 522 GVGASKPLFLGVMNNSSVDVTSGSRNCSSNLPNNILKTSKRINGSSTTSDAIFSFSESIS 581

Query: 265 RYAAYGAPLSAVNSAKSQYSQSTKHISSF 179
           R +     +   +       QS   ++ F
Sbjct: 582 RASKSAQKIDGESPVSRSLVQSNSSVNRF 610


>ref|XP_009388703.1| PREDICTED: SCAR-like protein 2 isoform X1 [Musa acuminata subsp.
           malaccensis]
 ref|XP_009388704.1| PREDICTED: SCAR-like protein 2 isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 1145

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
 Frame = -2

Query: 439 GVKPSKPFFIGAMHDSTGDHVSGSTNTGRNLPRYILETQK--HESPTKSDAILSNSGSTN 266
           GV  SKP F+G M++S+ D  SGS N   NLP  IL+T K  + S T SDAI S S S +
Sbjct: 560 GVGASKPLFLGVMNNSSVDVTSGSRNCSSNLPNNILKTSKRINGSSTTSDAIFSFSESIS 619

Query: 265 RYAAYGAPLSAVNSAKSQYSQSTKHISSF 179
           R +     +   +       QS   ++ F
Sbjct: 620 RASKSAQKIDGESPVSRSLVQSNSSVNRF 648


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