BLASTX nr result

ID: Cheilocostus21_contig00052697 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00052697
         (604 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018684754.1| PREDICTED: transcriptional corepressor LEUNI...    52   3e-07
ref|XP_009407638.1| PREDICTED: transcriptional corepressor LEUNI...    52   3e-07
ref|XP_018684755.1| PREDICTED: transcriptional corepressor LEUNI...    48   5e-06
ref|XP_009407639.1| PREDICTED: transcriptional corepressor LEUNI...    48   5e-06

>ref|XP_018684754.1| PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 893

 Score = 52.0 bits (123), Expect(2) = 3e-07
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = -2

Query: 87  DDSLVGMPSRTNQGGNNLTLKG*PLTGID 1
           D SL+GMP+ TNQGGNNLTLKG PLTG+D
Sbjct: 286 DGSLIGMPAGTNQGGNNLTLKGWPLTGLD 314



 Score = 30.4 bits (67), Expect(2) = 3e-07
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -1

Query: 136 TQDVKTQMNVVLTPR 92
           TQD+KT+MN VLTPR
Sbjct: 267 TQDIKTEMNAVLTPR 281


>ref|XP_009407638.1| PREDICTED: transcriptional corepressor LEUNIG-like isoform X3 [Musa
           acuminata subsp. malaccensis]
          Length = 889

 Score = 52.0 bits (123), Expect(2) = 3e-07
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = -2

Query: 87  DDSLVGMPSRTNQGGNNLTLKG*PLTGID 1
           D SL+GMP+ TNQGGNNLTLKG PLTG+D
Sbjct: 282 DGSLIGMPAGTNQGGNNLTLKGWPLTGLD 310



 Score = 30.4 bits (67), Expect(2) = 3e-07
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -1

Query: 136 TQDVKTQMNVVLTPR 92
           TQD+KT+MN VLTPR
Sbjct: 263 TQDIKTEMNAVLTPR 277


>ref|XP_018684755.1| PREDICTED: transcriptional corepressor LEUNIG-like isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 892

 Score = 47.8 bits (112), Expect(2) = 5e-06
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = -2

Query: 87  DDSLVGMPSRTNQGGNNLTLKG*PLTGID 1
           D SL+GMP  TNQGGNNLTLKG PLTG+D
Sbjct: 286 DGSLIGMPG-TNQGGNNLTLKGWPLTGLD 313



 Score = 30.4 bits (67), Expect(2) = 5e-06
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -1

Query: 136 TQDVKTQMNVVLTPR 92
           TQD+KT+MN VLTPR
Sbjct: 267 TQDIKTEMNAVLTPR 281


>ref|XP_009407639.1| PREDICTED: transcriptional corepressor LEUNIG-like isoform X4 [Musa
           acuminata subsp. malaccensis]
          Length = 888

 Score = 47.8 bits (112), Expect(2) = 5e-06
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = -2

Query: 87  DDSLVGMPSRTNQGGNNLTLKG*PLTGID 1
           D SL+GMP  TNQGGNNLTLKG PLTG+D
Sbjct: 282 DGSLIGMPG-TNQGGNNLTLKGWPLTGLD 309



 Score = 30.4 bits (67), Expect(2) = 5e-06
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -1

Query: 136 TQDVKTQMNVVLTPR 92
           TQD+KT+MN VLTPR
Sbjct: 263 TQDIKTEMNAVLTPR 277


Top