BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00052530
         (894 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]                 92   6e-17
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]...    92   6e-17
ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus] >gi|...    91   1e-16
gb|ATZ69486.1| ORF3 polyprotein [Cacao swollen shoot Ghana N virus]    87   2e-15
gb|ATZ69518.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]    86   5e-15
gb|ATZ69526.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]    86   5e-15
gb|ATZ69522.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]    86   5e-15
gb|ATZ69514.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]    86   1e-14
gb|ATZ69510.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]    86   1e-14
gb|ATZ69506.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]    86   1e-14
gb|ATZ69459.1| ORF3 polyprotein [Cacao swollen shoot CE virus]         86   1e-14
gb|ASM61441.1| polyprotein, partial [Cacao swollen shoot virus]        81   2e-14
gb|ASM61434.1| polyprotein, partial [Cacao swollen shoot virus] ...    81   2e-14
gb|ASM61436.1| polyprotein, partial [Cacao swollen shoot virus]        81   2e-14
gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]                      84   4e-14
gb|ASM61440.1| polyprotein, partial [Cacao swollen shoot virus]        80   4e-14
gb|ATZ69490.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]    83   8e-14
gb|ATZ69502.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]    83   8e-14
gb|ATZ69498.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]    83   8e-14
gb|ATZ69494.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]    83   8e-14

>gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]
          Length = 1803

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 52/87 (59%), Positives = 66/87 (75%), Gaps = 3/87 (3%)
 Frame = -2

Query: 551 SSGVQTQKEQPSTS--TPLFEDQIREYRRNQRRLHNVQQATRRLGRRLSGKLQ-PLQILE 381
           S+  +TQ +QPSTS  TPLFEDQIR YR+ QRRL+N +Q   RL RR++G+ Q   Q LE
Sbjct: 6   STTARTQ-DQPSTSRTTPLFEDQIRNYRQRQRRLNNARQVVGRLQRRITGRSQLHNQTLE 64

Query: 380 QEIDPGEQLQLSMTERASIVPAEVLYH 300
           Q+IDP  QL+ SM ERA+I+PAEV+YH
Sbjct: 65  QQIDPQVQLRNSMQERAAIIPAEVMYH 91


>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
 gb|AHI90954.1| polyprotein [Hibiscus bacilliform virus GD1]
          Length = 1892

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 44/78 (56%), Positives = 58/78 (74%)
 Frame = -2

Query: 536 TQKEQPSTSTPLFEDQIREYRRNQRRLHNVQQATRRLGRRLSGKLQPLQILEQEIDPGEQ 357
           T+++Q    TPLFEDQIR+YR +QRR +  Q+A RRL RR++G+    + LEQE+DP   
Sbjct: 17  TRRQQGERETPLFEDQIRDYRNSQRRAYTTQRAVRRLRRRITGRQPYQETLEQEVDPQAD 76

Query: 356 LQLSMTERASIVPAEVLY 303
           LQ+SM ERA +VPAEVLY
Sbjct: 77  LQMSMQERARLVPAEVLY 94


>ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus]
 gb|AKA45804.1| polyprotein [Taro bacilliform CH virus]
          Length = 1803

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
 Frame = -2

Query: 524 QPSTS--TPLFEDQIREYRRNQRRLHNVQQATRRLGRRLSGKLQ-PLQILEQEIDPGEQL 354
           QPSTS  TPLFEDQIR YR+ +RRLHN +Q   RL RR++G+ Q   Q LEQ+IDP   L
Sbjct: 14  QPSTSRTTPLFEDQIRNYRQRERRLHNARQVVGRLHRRITGRSQLHNQTLEQQIDPQVHL 73

Query: 353 QLSMTERASIVPAEVLYH 300
           + SM ERA+IVPAEVLYH
Sbjct: 74  RNSMQERAAIVPAEVLYH 91


>gb|ATZ69486.1| ORF3 polyprotein [Cacao swollen shoot Ghana N virus]
          Length = 1881

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 49/91 (53%), Positives = 63/91 (69%), Gaps = 9/91 (9%)
 Frame = -2

Query: 548 SGVQTQKEQPSTS---------TPLFEDQIREYRRNQRRLHNVQQATRRLGRRLSGKLQP 396
           S  QT +E PS +         TPLFEDQ+R+YR+NQRRL N+Q+ATRRL   ++G+ + 
Sbjct: 2   SRTQTVQENPSVTDGRGRQRDNTPLFEDQVRDYRQNQRRLFNLQRATRRLRGSVTGR-RY 60

Query: 395 LQILEQEIDPGEQLQLSMTERASIVPAEVLY 303
              LEQE+DP   L+LSM ERA +VPAEVLY
Sbjct: 61  QDTLEQEVDPQAALRLSMQERARLVPAEVLY 91


>gb|ATZ69518.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
          Length = 1833

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
 Frame = -2

Query: 569 KTKALMSSGVQTQKEQPSTSTPLFEDQIREYRRNQRRLHNVQQATRRLGRRLSGKLQPLQ 390
           +T+ +M + V  ++ + + S P F+DQIR YR NQRR +NVQ++ RR+  RL+G  QP +
Sbjct: 4   RTETMMETPVSGRRNEEA-SGPSFDDQIRSYRNNQRRRYNVQRSFRRMRGRLTG--QPYE 60

Query: 389 -ILEQEIDPGEQLQLSMTERASIVPAEVLYHWVNCSSH 279
             LEQEIDP   L++SM ERA +VPAEVLYH    S+H
Sbjct: 61  RTLEQEIDPQATLRMSMRERARLVPAEVLYHSREDSAH 98


>gb|ATZ69526.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
          Length = 1833

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
 Frame = -2

Query: 569 KTKALMSSGVQTQKEQPSTSTPLFEDQIREYRRNQRRLHNVQQATRRLGRRLSGKLQPLQ 390
           +T+ +M + V  ++ + + S P F+DQIR YR NQRR +NVQ++ RR+  RL+G  QP +
Sbjct: 4   RTETMMETPVSGRRNEEA-SGPSFDDQIRSYRNNQRRRYNVQRSFRRMRGRLTG--QPYE 60

Query: 389 -ILEQEIDPGEQLQLSMTERASIVPAEVLYHWVNCSSH 279
             LEQEIDP   L++SM ERA +VPAEVLYH    S+H
Sbjct: 61  RTLEQEIDPQATLRMSMRERARLVPAEVLYHSREDSAH 98


>gb|ATZ69522.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
          Length = 1833

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
 Frame = -2

Query: 569 KTKALMSSGVQTQKEQPSTSTPLFEDQIREYRRNQRRLHNVQQATRRLGRRLSGKLQPLQ 390
           +T+ +M + V  ++ + + S P F+DQIR YR NQRR +NVQ++ RR+  RL+G  QP +
Sbjct: 4   RTETMMETPVSGRRNEEA-SGPSFDDQIRSYRNNQRRRYNVQRSFRRMRGRLTG--QPYE 60

Query: 389 -ILEQEIDPGEQLQLSMTERASIVPAEVLYHWVNCSSH 279
             LEQEIDP   L++SM ERA +VPAEVLYH    S+H
Sbjct: 61  RTLEQEIDPQATLRMSMRERARLVPAEVLYHSREDSAH 98


>gb|ATZ69514.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
          Length = 1833

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 49/98 (50%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
 Frame = -2

Query: 569 KTKALMSSGVQTQKEQPSTSTPLFEDQIREYRRNQRRLHNVQQATRRLGRRLSGKLQPLQ 390
           +T+ +M + V  ++ + + S P F DQIR YR NQRR +NVQ++ RR+  RL+G  QP +
Sbjct: 4   RTETMMETPVSGRRNEEA-SGPSFNDQIRSYRNNQRRRYNVQRSFRRMRGRLTG--QPYE 60

Query: 389 -ILEQEIDPGEQLQLSMTERASIVPAEVLYHWVNCSSH 279
             LEQEIDP   L++SM ERA +VPAEVLYH    S+H
Sbjct: 61  RTLEQEIDPQATLRMSMRERARLVPAEVLYHSREDSAH 98


>gb|ATZ69510.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
          Length = 1833

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 49/98 (50%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
 Frame = -2

Query: 569 KTKALMSSGVQTQKEQPSTSTPLFEDQIREYRRNQRRLHNVQQATRRLGRRLSGKLQPLQ 390
           +T+ +M + V  ++ + + S P F DQIR YR NQRR +NVQ++ RR+  RL+G  QP +
Sbjct: 4   RTETMMETPVSGRRNEEA-SGPSFNDQIRSYRNNQRRRYNVQRSFRRMRGRLTG--QPYE 60

Query: 389 -ILEQEIDPGEQLQLSMTERASIVPAEVLYHWVNCSSH 279
             LEQEIDP   L++SM ERA +VPAEVLYH    S+H
Sbjct: 61  RTLEQEIDPQATLRMSMRERARLVPAEVLYHSREDSAH 98


>gb|ATZ69506.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
          Length = 1839

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 49/98 (50%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
 Frame = -2

Query: 569 KTKALMSSGVQTQKEQPSTSTPLFEDQIREYRRNQRRLHNVQQATRRLGRRLSGKLQPLQ 390
           +T+ +M + V  ++ + + S P F DQIR YR NQRR +NVQ++ RR+  RL+G  QP +
Sbjct: 4   RTETMMETPVSGRRNEEA-SGPSFNDQIRSYRNNQRRRYNVQRSFRRMRGRLTG--QPYE 60

Query: 389 -ILEQEIDPGEQLQLSMTERASIVPAEVLYHWVNCSSH 279
             LEQEIDP   L++SM ERA +VPAEVLYH    S+H
Sbjct: 61  RTLEQEIDPQATLRMSMRERARLVPAEVLYHSREDSAH 98


>gb|ATZ69459.1| ORF3 polyprotein [Cacao swollen shoot CE virus]
          Length = 1855

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 52/102 (50%), Positives = 67/102 (65%), Gaps = 6/102 (5%)
 Frame = -2

Query: 515 TSTPLFEDQIREYRRNQRRLHNVQQATRRLGRRLS---GKLQPLQILEQEIDPGEQLQLS 345
           T+TPLF+DQIR+YR+ QRR+HN+++  RRL R LS   G+ Q  + LEQEIDP   L+LS
Sbjct: 25  TNTPLFDDQIRDYRQGQRRMHNLRRRARRLQRSLSAGPGRFQ--ETLEQEIDPQTTLRLS 82

Query: 344 MTERASIVPAEVLYH-WVNCSSHSIMTKRLRFS--CPRANTI 228
           M ERA +VPAEVLY    +  +H + T R   S  C   N I
Sbjct: 83  MQERARLVPAEVLYRSRRDTVNHRVYTHRSEESILCTEGNQI 124


>gb|ASM61441.1| polyprotein, partial [Cacao swollen shoot virus]
          Length = 241

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 48/89 (53%), Positives = 61/89 (68%), Gaps = 10/89 (11%)
 Frame = -2

Query: 539 QTQKEQ-PSTST--------PLFEDQIREYRRNQRRLHNVQQATRRLGRRLSG-KLQPLQ 390
           QT+  Q PS +T        PLFEDQ+R+YRRNQRRL N+++  RR  R L+G + +  +
Sbjct: 3   QTRTHQMPSVTTTVNEQGEGPLFEDQVRDYRRNQRRLFNLRKKARRAQRALTGSRSRHQE 62

Query: 389 ILEQEIDPGEQLQLSMTERASIVPAEVLY 303
            LEQEIDP   L+LSM ERA +VPAEVLY
Sbjct: 63  TLEQEIDPQVTLRLSMQERARLVPAEVLY 91


>gb|ASM61434.1| polyprotein, partial [Cacao swollen shoot virus]
 gb|ASM61435.1| polyprotein, partial [Cacao swollen shoot virus]
 gb|ASM61437.1| polyprotein, partial [Cacao swollen shoot virus]
 gb|ASM61442.1| polyprotein, partial [Cacao swollen shoot virus]
          Length = 241

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 48/89 (53%), Positives = 61/89 (68%), Gaps = 10/89 (11%)
 Frame = -2

Query: 539 QTQKEQ-PSTST--------PLFEDQIREYRRNQRRLHNVQQATRRLGRRLSG-KLQPLQ 390
           QT+  Q PS +T        PLFEDQ+R+YRRNQRRL N+++  RR  R L+G + +  +
Sbjct: 3   QTRTHQMPSVTTTVNEQGEGPLFEDQVRDYRRNQRRLFNLRKKARRAQRALTGSRSRHQE 62

Query: 389 ILEQEIDPGEQLQLSMTERASIVPAEVLY 303
            LEQEIDP   L+LSM ERA +VPAEVLY
Sbjct: 63  TLEQEIDPQVTLRLSMQERARLVPAEVLY 91


>gb|ASM61436.1| polyprotein, partial [Cacao swollen shoot virus]
          Length = 241

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 48/89 (53%), Positives = 61/89 (68%), Gaps = 10/89 (11%)
 Frame = -2

Query: 539 QTQKEQ-PSTST--------PLFEDQIREYRRNQRRLHNVQQATRRLGRRLSG-KLQPLQ 390
           QT+  Q PS +T        PLFEDQ+R+YRRNQRRL N+++  RR  R L+G + +  +
Sbjct: 3   QTRTHQMPSVTTTVNEQGEGPLFEDQVRDYRRNQRRLFNLRKKARRAQRALTGSRSRHQE 62

Query: 389 ILEQEIDPGEQLQLSMTERASIVPAEVLY 303
            LEQEIDP   L+LSM ERA +VPAEVLY
Sbjct: 63  TLEQEIDPQVTLRLSMQERARLVPAEVLY 91


>gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]
          Length = 1946

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 43/79 (54%), Positives = 57/79 (72%)
 Frame = -2

Query: 536 TQKEQPSTSTPLFEDQIREYRRNQRRLHNVQQATRRLGRRLSGKLQPLQILEQEIDPGEQ 357
           ++++  +T  P  EDQI+EYR N+RRL+N+QQ  RRL  RL  +    + LEQ IDP EQ
Sbjct: 2   SRQQTLATIAPTVEDQIQEYRNNRRRLYNLQQGARRLKNRLQKRTYE-RTLEQYIDPNEQ 60

Query: 356 LQLSMTERASIVPAEVLYH 300
           L+LSM +RA +VPAEVLYH
Sbjct: 61  LKLSMKKRAKLVPAEVLYH 79


>gb|ASM61440.1| polyprotein, partial [Cacao swollen shoot virus]
          Length = 241

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 48/89 (53%), Positives = 61/89 (68%), Gaps = 10/89 (11%)
 Frame = -2

Query: 539 QTQKEQ-PSTST--------PLFEDQIREYRRNQRRLHNVQQATRRLGRRLSG-KLQPLQ 390
           QT+  Q PS +T        PLFEDQ+R+YRRNQRRL N+++  RR  R L+G + +  +
Sbjct: 3   QTRTHQMPSVTTTVNEQGEGPLFEDQVRDYRRNQRRLFNLRKKARRAQRALTGSRSRHQE 62

Query: 389 ILEQEIDPGEQLQLSMTERASIVPAEVLY 303
            LEQEIDP   L+LSM ERA +VPAEVLY
Sbjct: 63  TLEQEIDPQVILRLSMQERARLVPAEVLY 91


>gb|ATZ69490.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]
          Length = 1853

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 49/93 (52%), Positives = 62/93 (66%), Gaps = 8/93 (8%)
 Frame = -2

Query: 554 MSSGVQTQKEQP-----STSTP--LFEDQIREYRRNQRRLHNVQQATRRLGRRLSGKLQP 396
           M++  QT+ E P     +  TP   F+DQIR YR +QRR HNVQQ  RR+  R++G  QP
Sbjct: 1   MTTRTQTEVETPVSRRRNEETPGLSFDDQIRSYRNSQRRRHNVQQGMRRMRSRITG--QP 58

Query: 395 LQ-ILEQEIDPGEQLQLSMTERASIVPAEVLYH 300
            +  LEQEIDP   L++SM ERA +VPAEVLYH
Sbjct: 59  YERTLEQEIDPQATLRMSMRERARLVPAEVLYH 91


>gb|ATZ69502.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]
          Length = 1858

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 49/93 (52%), Positives = 62/93 (66%), Gaps = 8/93 (8%)
 Frame = -2

Query: 554 MSSGVQTQKEQP-----STSTP--LFEDQIREYRRNQRRLHNVQQATRRLGRRLSGKLQP 396
           M++  QT+ E P     +  TP   F+DQIR YR +QRR HNVQQ  RR+  R++G  QP
Sbjct: 1   MTTRTQTEVETPVSRRRNDETPGLSFDDQIRSYRNSQRRRHNVQQGMRRMRSRITG--QP 58

Query: 395 LQ-ILEQEIDPGEQLQLSMTERASIVPAEVLYH 300
            +  LEQEIDP   L++SM ERA +VPAEVLYH
Sbjct: 59  YERTLEQEIDPQATLRMSMRERARLVPAEVLYH 91


>gb|ATZ69498.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]
          Length = 1859

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 49/93 (52%), Positives = 62/93 (66%), Gaps = 8/93 (8%)
 Frame = -2

Query: 554 MSSGVQTQKEQP-----STSTP--LFEDQIREYRRNQRRLHNVQQATRRLGRRLSGKLQP 396
           M++  QT+ E P     +  TP   F+DQIR YR +QRR HNVQQ  RR+  R++G  QP
Sbjct: 1   MTTRTQTEVETPVSRRRNEETPGLSFDDQIRSYRNSQRRRHNVQQGMRRMRSRITG--QP 58

Query: 395 LQ-ILEQEIDPGEQLQLSMTERASIVPAEVLYH 300
            +  LEQEIDP   L++SM ERA +VPAEVLYH
Sbjct: 59  YERTLEQEIDPQATLRMSMRERARLVPAEVLYH 91


>gb|ATZ69494.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]
          Length = 1941

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 49/93 (52%), Positives = 62/93 (66%), Gaps = 8/93 (8%)
 Frame = -2

Query: 554 MSSGVQTQKEQP-----STSTP--LFEDQIREYRRNQRRLHNVQQATRRLGRRLSGKLQP 396
           M++  QT+ E P     +  TP   F+DQIR YR +QRR HNVQQ  RR+  R++G  QP
Sbjct: 1   MTTRTQTEVETPVSRRRNEETPGLSFDDQIRSYRNSQRRRHNVQQGMRRMRSRITG--QP 58

Query: 395 LQ-ILEQEIDPGEQLQLSMTERASIVPAEVLYH 300
            +  LEQEIDP   L++SM ERA +VPAEVLYH
Sbjct: 59  YERTLEQEIDPQATLRMSMRERARLVPAEVLYH 91