BLASTX nr result

ID: Cheilocostus21_contig00052477 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00052477
         (644 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009403999.1| PREDICTED: polygalacturonase At1g48100 [Musa...    76   2e-12

>ref|XP_009403999.1| PREDICTED: polygalacturonase At1g48100 [Musa acuminata subsp.
           malaccensis]
          Length = 463

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 48/92 (52%), Positives = 56/92 (60%), Gaps = 11/92 (11%)
 Frame = +2

Query: 161 MRDKKHMFISDGALCLII---LYTVSLMK--------INGRGYEIGFGLSDSSSPSGAQL 307
           MRD+ H+ +S   L L I   L TVS M+        +   G++ G G S SSSPS A  
Sbjct: 1   MRDRNHLPVSHVLLWLAISSILSTVSPMRSHLKPSEVLRHGGHDPGLGHSYSSSPSTANQ 60

Query: 308 HGSYMAPHSKSFNILLFGATGDGTSDDSKVCK 403
           HGSYM PHSK FNIL FGATGDG +DDSK  K
Sbjct: 61  HGSYM-PHSKKFNILFFGATGDGVADDSKAFK 91