BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00052367
         (802 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ALT16945.1| ribosomal protein L23 (chloroplast) [Endiandra gl...    40   5e-09
gb|PHU24596.1| 50S ribosomal protein L2, chloroplastic [Capsicum...    49   6e-09
ref|YP_009049660.1| hypothetical protein (mitochondrion) [Capsic...    48   8e-09
ref|YP_009402478.1| ribosomal protein L2 (chloroplast) [Faidherb...    45   8e-07
ref|YP_009450127.1| ribosomal protein L2 (chloroplast) [Burmanni...    43   4e-06
ref|YP_009365723.1| ribosomal protein L2 (plastid) [Digitalis la...    43   6e-06
ref|YP_009294905.1| ribosomal protein L2 (plastid) [Veronica nak...    43   6e-06
ref|YP_009183121.1| ribosomal protein L2 (plastid) [Plantago med...    43   6e-06
ref|YP_009183031.1| ribosomal protein L2 (plastid) [Plantago mar...    43   6e-06
gb|AKZ23474.1| ribosomal protein L2 (plastid) [Plantago patagonica]    43   6e-06
gb|AKZ23473.1| ribosomal protein L2 (plastid) [Veronica americana]     43   6e-06
ref|YP_009388812.1| ribosomal protein L2 (chloroplast) [Ocimum b...    41   6e-06
gb|ALI90739.1| Rpl2, partial (chloroplast) [Borago officinalis]        41   6e-06
ref|YP_009183634.1| ribosomal protein L2 (chloroplast) [Scutella...    41   8e-06
ref|YP_009462789.1| ribosomal protein L2 (chloroplast) [Tetragon...    41   8e-06
ref|YP_009162303.1| ribosomal protein L2 (chloroplast) [Scutella...    41   8e-06

>gb|ALT16945.1| ribosomal protein L23 (chloroplast) [Endiandra globosa]
          Length = 233

 Score = 40.0 bits (92), Expect(3) = 5e-09
 Identities = 18/33 (54%), Positives = 21/33 (63%)
 Frame = +1

Query: 463 TNGCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           + G NARGII  RHR G H   Y K+D  +NEK
Sbjct: 138 SKGRNARGIITARHRGGGHKRLYRKMDFRRNEK 170



 Score = 35.4 bits (80), Expect(3) = 5e-09
 Identities = 17/26 (65%), Positives = 17/26 (65%)
 Frame = +2

Query: 305 AKQMYDHYALARLFYSTSNGENNFIQ 382
           A Q YDHYA   LFYSTS  E NF Q
Sbjct: 69  ALQTYDHYASTGLFYSTSYREKNFSQ 94



 Score = 33.5 bits (75), Expect(3) = 5e-09
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 372 TSYKVIHAQNFNNQVKFNPQNNLIYGYNHCDK 467
           TS   I   + N+QVK NP+NNLI G + C K
Sbjct: 108 TSTPSIRNGSVNSQVKSNPRNNLISGQHRCSK 139


>gb|PHU24596.1| 50S ribosomal protein L2, chloroplastic [Capsicum chinense]
          Length = 172

 Score = 48.5 bits (114), Expect(2) = 6e-09
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 15/65 (23%)
 Frame = +3

Query: 318 MIIML*PGCSIPPLTEKTTSYKVIHAQNFN---------------NQVKFNPQNNLIYGY 452
           MII L PG SIPPL +K T+ K++++   +               +QVK  P+NNLIYG 
Sbjct: 14  MIITLQPGYSIPPLRKKRTTIKILNSMAIHLYKTSTPSTRNVAVDSQVKSIPRNNLIYGQ 73

Query: 453 NHCDK 467
            HC K
Sbjct: 74  QHCGK 78



 Score = 40.8 bits (94), Expect(2) = 6e-09
 Identities = 19/31 (61%), Positives = 20/31 (64%)
 Frame = +1

Query: 469 GCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           G NARGII  RHR G H   Y KID  +NEK
Sbjct: 79  GRNARGIITARHRGGGHKRLYRKIDFRRNEK 109


>ref|YP_009049660.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 gb|AIG89853.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 gb|AIG90018.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 gb|PHT85455.1| 50S ribosomal protein L2, chloroplastic [Capsicum annuum]
          Length = 172

 Score = 48.1 bits (113), Expect(2) = 8e-09
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 15/67 (22%)
 Frame = +3

Query: 312 RCMIIML*PGCSIPPLTEKTTSYKVIHAQ---------------NFNNQVKFNPQNNLIY 446
           R MII L PG SIPP  +K T+ K++++                  ++QVK NP+NNLIY
Sbjct: 12  RRMIITLQPGYSIPPQRKKRTTIKILNSMAIHLYKTSTPSTRNGTVDSQVKSNPRNNLIY 71

Query: 447 GYNHCDK 467
           G + C K
Sbjct: 72  GQHRCGK 78



 Score = 40.8 bits (94), Expect(2) = 8e-09
 Identities = 19/31 (61%), Positives = 20/31 (64%)
 Frame = +1

Query: 469 GCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           G NARGII  RHR G H   Y KID  +NEK
Sbjct: 79  GRNARGIITARHRGGGHKRLYRKIDFRRNEK 109


>ref|YP_009402478.1| ribosomal protein L2 (chloroplast) [Faidherbia albida]
 ref|YP_009402506.1| ribosomal protein L2 (chloroplast) [Faidherbia albida]
 gb|APA33119.1| ribosomal protein L2 (chloroplast) [Faidherbia albida]
 gb|APA33147.1| ribosomal protein L2 (chloroplast) [Faidherbia albida]
          Length = 274

 Score = 45.4 bits (106), Expect(2) = 8e-07
 Identities = 20/31 (64%), Positives = 21/31 (67%)
 Frame = +1

Query: 469 GCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           GCNARGII  RHR G H   Y KID  +NEK
Sbjct: 40  GCNARGIITARHRGGGHKRLYRKIDFRRNEK 70



 Score = 36.6 bits (83), Expect(2) = 8e-07
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +3

Query: 405 NNQVKFNPQNNLIYGYNHCDK 467
           ++QVK+NPQNNLIYG + C K
Sbjct: 19  DSQVKYNPQNNLIYGQHRCGK 39


>ref|YP_009450127.1| ribosomal protein L2 (chloroplast) [Burmannia oblonga]
 ref|YP_009450130.1| ribosomal protein L2 (chloroplast) [Burmannia oblonga]
 gb|ANK36324.1| ribosomal protein L2 (chloroplast) [Burmannia oblonga]
 gb|ANK36327.1| ribosomal protein L2 (chloroplast) [Burmannia oblonga]
          Length = 276

 Score = 42.7 bits (99), Expect(2) = 4e-06
 Identities = 20/31 (64%), Positives = 21/31 (67%)
 Frame = +1

Query: 469 GCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           G NARGII TRHR G H   Y KID  +NEK
Sbjct: 40  GRNARGIITTRHRGGGHKRLYRKIDFRRNEK 70



 Score = 37.0 bits (84), Expect(2) = 4e-06
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = +3

Query: 372 TSYKVIHAQNFNNQVKFNPQNNLIYGYNHCDK 467
           TS    H    ++Q+KFNP+NNLIYG++ C K
Sbjct: 8   TSTPSTHNGAVDSQLKFNPRNNLIYGWHRCCK 39


>ref|YP_009365723.1| ribosomal protein L2 (plastid) [Digitalis lanata]
 ref|YP_009365702.1| ribosomal protein L2 (plastid) [Digitalis lanata]
 gb|ARJ61180.1| ribosomal protein L2 (plastid) [Digitalis lanata]
 gb|ARJ61181.1| ribosomal protein L2 (plastid) [Digitalis lanata]
          Length = 275

 Score = 42.7 bits (99), Expect(2) = 6e-06
 Identities = 20/31 (64%), Positives = 21/31 (67%)
 Frame = +1

Query: 469 GCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           G NARGII TRHR G H   Y KID  +NEK
Sbjct: 40  GRNARGIITTRHRGGGHKRLYRKIDFRRNEK 70



 Score = 36.2 bits (82), Expect(2) = 6e-06
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +3

Query: 405 NNQVKFNPQNNLIYGYNHCDK 467
           ++QVK NP+NNLIYG +HC K
Sbjct: 19  DSQVKSNPRNNLIYGQHHCGK 39


>ref|YP_009294905.1| ribosomal protein L2 (plastid) [Veronica nakaiana]
 ref|YP_009294929.1| ribosomal protein L2 (plastid) [Veronica nakaiana]
 ref|YP_009305591.1| ribosomal protein L2 (plastid) [Veronica persica]
 ref|YP_009305613.1| ribosomal protein L2 (plastid) [Veronica persica]
 ref|YP_009305677.1| ribosomal protein L2 (plastid) [Veronicastrum sibiricum]
 ref|YP_009305699.1| ribosomal protein L2 (plastid) [Veronicastrum sibiricum]
 gb|ANA57577.1| ribosomal protein L2 (plastid) [Veronica nakaiana]
 gb|ANA57601.1| ribosomal protein L2 (plastid) [Veronica nakaiana]
 gb|ANA57665.1| ribosomal protein L2 (plastid) [Veronica persica]
 gb|ANA57687.1| ribosomal protein L2 (plastid) [Veronica persica]
 gb|ANA57751.1| ribosomal protein L2 (plastid) [Veronicastrum sibiricum]
 gb|ANA57773.1| ribosomal protein L2 (plastid) [Veronicastrum sibiricum]
          Length = 275

 Score = 42.7 bits (99), Expect(2) = 6e-06
 Identities = 20/31 (64%), Positives = 21/31 (67%)
 Frame = +1

Query: 469 GCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           G NARGII TRHR G H   Y KID  +NEK
Sbjct: 40  GRNARGIITTRHRGGGHKRLYRKIDFRRNEK 70



 Score = 36.2 bits (82), Expect(2) = 6e-06
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +3

Query: 405 NNQVKFNPQNNLIYGYNHCDK 467
           ++QVK NP+NNLIYG +HC K
Sbjct: 19  DSQVKSNPRNNLIYGQHHCGK 39


>ref|YP_009183121.1| ribosomal protein L2 (plastid) [Plantago media]
 ref|YP_009183151.1| ribosomal protein L2 (plastid) [Plantago media]
 gb|ALJ78382.1| ribosomal protein L2 (plastid) [Plantago media]
 gb|ALJ78413.1| ribosomal protein L2 (plastid) [Plantago media]
          Length = 274

 Score = 42.7 bits (99), Expect(2) = 6e-06
 Identities = 20/31 (64%), Positives = 21/31 (67%)
 Frame = +1

Query: 469 GCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           G NARGII TRHR G H   Y KID  +NEK
Sbjct: 40  GRNARGIITTRHRGGGHKRLYRKIDFRRNEK 70



 Score = 36.2 bits (82), Expect(2) = 6e-06
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +3

Query: 405 NNQVKFNPQNNLIYGYNHCDK 467
           ++QVK NP+NNLIYG +HC K
Sbjct: 19  DSQVKSNPRNNLIYGQHHCGK 39


>ref|YP_009183031.1| ribosomal protein L2 (plastid) [Plantago maritima]
 ref|YP_009183057.1| ribosomal protein L2 (plastid) [Plantago maritima]
 gb|ALJ78291.1| ribosomal protein L2 (plastid) [Plantago maritima]
 gb|ALJ78318.1| ribosomal protein L2 (plastid) [Plantago maritima]
          Length = 274

 Score = 42.7 bits (99), Expect(2) = 6e-06
 Identities = 20/31 (64%), Positives = 21/31 (67%)
 Frame = +1

Query: 469 GCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           G NARGII TRHR G H   Y KID  +NEK
Sbjct: 40  GRNARGIITTRHRGGGHKRLYRKIDFRRNEK 70



 Score = 36.2 bits (82), Expect(2) = 6e-06
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +3

Query: 405 NNQVKFNPQNNLIYGYNHCDK 467
           ++QVK NP+NNLIYG +HC K
Sbjct: 19  DSQVKSNPRNNLIYGQHHCGK 39


>gb|AKZ23474.1| ribosomal protein L2 (plastid) [Plantago patagonica]
          Length = 274

 Score = 42.7 bits (99), Expect(2) = 6e-06
 Identities = 20/31 (64%), Positives = 21/31 (67%)
 Frame = +1

Query: 469 GCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           G NARGII TRHR G H   Y KID  +NEK
Sbjct: 40  GRNARGIITTRHRGGGHKRLYRKIDFRRNEK 70



 Score = 36.2 bits (82), Expect(2) = 6e-06
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +3

Query: 405 NNQVKFNPQNNLIYGYNHCDK 467
           ++QVK NP+NNLIYG +HC K
Sbjct: 19  DSQVKSNPRNNLIYGQHHCGK 39


>gb|AKZ23473.1| ribosomal protein L2 (plastid) [Veronica americana]
          Length = 274

 Score = 42.7 bits (99), Expect(2) = 6e-06
 Identities = 20/31 (64%), Positives = 21/31 (67%)
 Frame = +1

Query: 469 GCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           G NARGII TRHR G H   Y KID  +NEK
Sbjct: 40  GRNARGIITTRHRGGGHKRLYRKIDFRRNEK 70



 Score = 36.2 bits (82), Expect(2) = 6e-06
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +3

Query: 405 NNQVKFNPQNNLIYGYNHCDK 467
           ++QVK NP+NNLIYG +HC K
Sbjct: 19  DSQVKSNPRNNLIYGQHHCGK 39


>ref|YP_009388812.1| ribosomal protein L2 (chloroplast) [Ocimum basilicum]
 gb|ARU77282.1| ribosomal protein L2 (chloroplast) [Ocimum basilicum]
          Length = 274

 Score = 40.8 bits (94), Expect(2) = 6e-06
 Identities = 19/31 (61%), Positives = 20/31 (64%)
 Frame = +1

Query: 469 GCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           G NARGII  RHR G H   Y KID  +NEK
Sbjct: 40  GRNARGIITARHRGGGHKRLYRKIDFRRNEK 70



 Score = 38.1 bits (87), Expect(2) = 6e-06
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +3

Query: 405 NNQVKFNPQNNLIYGYNHCDK 467
           N+QVK NP+NNLIYG +HC K
Sbjct: 19  NSQVKSNPRNNLIYGQHHCGK 39


>gb|ALI90739.1| Rpl2, partial (chloroplast) [Borago officinalis]
          Length = 274

 Score = 40.8 bits (94), Expect(2) = 6e-06
 Identities = 19/31 (61%), Positives = 20/31 (64%)
 Frame = +1

Query: 469 GCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           G NARGII  RHR G H   Y KID  +NEK
Sbjct: 40  GRNARGIITARHRGGGHKRLYRKIDFRRNEK 70



 Score = 38.1 bits (87), Expect(2) = 6e-06
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +3

Query: 405 NNQVKFNPQNNLIYGYNHCDK 467
           N+QVK NP+NNLIYG +HC K
Sbjct: 19  NSQVKSNPRNNLIYGQHHCGK 39


>ref|YP_009183634.1| ribosomal protein L2 (chloroplast) [Scutellaria insignis]
 ref|YP_009183657.1| ribosomal protein L2 (chloroplast) [Scutellaria insignis]
 gb|ALN11644.1| ribosomal protein L2 (chloroplast) [Scutellaria insignis]
 gb|ALN11667.1| ribosomal protein L2 (chloroplast) [Scutellaria insignis]
 gb|AVA08977.1| ribosomal protein L2 (chloroplast) [Scutellaria baicalensis]
 gb|AVA09064.1| ribosomal protein L2 (chloroplast) [Scutellaria baicalensis]
          Length = 275

 Score = 40.8 bits (94), Expect(2) = 8e-06
 Identities = 19/31 (61%), Positives = 20/31 (64%)
 Frame = +1

Query: 469 GCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           G NARGII  RHR G H   Y KID  +NEK
Sbjct: 40  GRNARGIITARHRGGGHKRLYRKIDFQRNEK 70



 Score = 37.7 bits (86), Expect(2) = 8e-06
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +3

Query: 405 NNQVKFNPQNNLIYGYNHCDK 467
           + QVK+NP+NNLIYG +HC K
Sbjct: 19  DRQVKYNPRNNLIYGQHHCGK 39


>ref|YP_009462789.1| ribosomal protein L2 (chloroplast) [Tetragonia tetragonioides]
 ref|YP_009462769.1| ribosomal protein L2 (chloroplast) [Tetragonia tetragonioides]
 gb|AUV65162.1| ribosomal protein L2 (chloroplast) [Tetragonia tetragonioides]
 gb|AUV65214.1| ribosomal protein L2 (chloroplast) [Tetragonia tetragonioides]
          Length = 274

 Score = 40.8 bits (94), Expect(2) = 8e-06
 Identities = 19/31 (61%), Positives = 20/31 (64%)
 Frame = +1

Query: 469 GCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           G NARGII  RHR G H   Y KID  +NEK
Sbjct: 40  GRNARGIITARHRGGGHKRLYRKIDFRRNEK 70



 Score = 37.7 bits (86), Expect(2) = 8e-06
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +3

Query: 405 NNQVKFNPQNNLIYGYNHCDK 467
           +NQVK NP+NNLIYG  HC K
Sbjct: 19  DNQVKSNPRNNLIYGQRHCGK 39


>ref|YP_009162303.1| ribosomal protein L2 (chloroplast) [Scutellaria baicalensis]
 ref|YP_009162326.1| ribosomal protein L2 (chloroplast) [Scutellaria baicalensis]
 ref|YP_009366127.1| ribosomal protein L2 (plastid) [Scutellaria lateriflora]
 ref|YP_009366149.1| ribosomal protein L2 (plastid) [Scutellaria lateriflora]
 gb|AKJ77146.1| ribosomal protein L2 (chloroplast) [Scutellaria baicalensis]
 gb|AKJ77147.1| ribosomal protein L2 (chloroplast) [Scutellaria baicalensis]
 gb|ARJ61603.1| ribosomal protein L2 (plastid) [Scutellaria lateriflora]
 gb|ARJ61604.1| ribosomal protein L2 (plastid) [Scutellaria lateriflora]
 gb|AVA09000.1| ribosomal protein L2 (chloroplast) [Scutellaria baicalensis]
 gb|AVA09087.1| ribosomal protein L2 (chloroplast) [Scutellaria baicalensis]
          Length = 274

 Score = 40.8 bits (94), Expect(2) = 8e-06
 Identities = 19/31 (61%), Positives = 20/31 (64%)
 Frame = +1

Query: 469 GCNARGIIITRHREGKHTHPYNKIDLHQNEK 561
           G NARGII  RHR G H   Y KID  +NEK
Sbjct: 40  GRNARGIITARHRGGGHKRLYRKIDFQRNEK 70



 Score = 37.7 bits (86), Expect(2) = 8e-06
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +3

Query: 405 NNQVKFNPQNNLIYGYNHCDK 467
           + QVK+NP+NNLIYG +HC K
Sbjct: 19  DRQVKYNPRNNLIYGQHHCGK 39