BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00051621
         (654 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022156777.1| uncharacterized protein LOC111023608 [Momord...    49   3e-10
gb|OMO55679.1| reverse transcriptase [Corchorus capsularis]            48   3e-07
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    49   1e-06
gb|OMO94917.1| reverse transcriptase [Corchorus capsularis]            51   2e-06

>ref|XP_022156777.1| uncharacterized protein LOC111023608 [Momordica charantia]
          Length = 228

 Score = 48.9 bits (115), Expect(2) = 3e-10
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
 Frame = +3

Query: 126 RKVMDNSFSKWEKPLE*QLKVNTDGAWNYTTKEAGIGCIIRNSEGITLLA-AAAYHESPS 302
           R++ DN+ ++W+ P     K+NTD AW   T   GIG I+R+ +G  + A         +
Sbjct: 69  RRIGDNTGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRTERN 128

Query: 303 ILYSELLAIKS------ENELHPLKHEH 368
           I Y E++AI        +    P++ EH
Sbjct: 129 ITYLEVMAICEGLRAIRQEHCRPIQQEH 156



 Score = 43.9 bits (102), Expect(2) = 3e-10
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +1

Query: 370 YAHTIHIESDSLEAIQAIIGKNAHTPVETHRLLQEI-QLMKSMRIYCFRRIRREGNEPAN 546
           +   IH+ESDSLEAI  ++ +      E   LL+EI Q+M+ M+I   R I RE N+ A+
Sbjct: 156 HCRPIHLESDSLEAIH-LLHRQCQDQTEIIWLLEEIWQMMEDMKIVSMRHISREANKVAH 214

Query: 547 WLAGHA 564
            LA  A
Sbjct: 215 DLARRA 220


>gb|OMO55679.1| reverse transcriptase [Corchorus capsularis]
          Length = 1701

 Score = 47.8 bits (112), Expect(2) = 3e-07
 Identities = 24/65 (36%), Positives = 38/65 (58%)
 Frame = +3

Query: 138  DNSFSKWEKPLE*QLKVNTDGAWNYTTKEAGIGCIIRNSEGITLLAAAAYHESPSILYSE 317
            +N   KW +P E  LK+N+DG++   T  AGIG ++RN +G  L A      + + L +E
Sbjct: 1531 ENQEQKWLRPPEGWLKINSDGSFCTKTNLAGIGFVVRNHDGQVLQATGKMCSATTALITE 1590

Query: 318  LLAIK 332
             LA++
Sbjct: 1591 ALALR 1595



 Score = 35.0 bits (79), Expect(2) = 3e-07
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
 Frame = +1

Query: 367  TYAHTIHIESDSLEAIQAIIGKNA-HTPVETHRLLQEIQLM-KSMRIYCFRRIRREGNEP 540
            T  H  + E DS E  + II K+A         ++Q+ QLM  S++    R+I R  N+ 
Sbjct: 1604 TGCHKAYFEVDSAELHRNIIEKDAVKLDWRIKHIVQDTQLMLNSIQEKEIRKICRSANKA 1663

Query: 541  ANWLAGHAKLFRLQNVWK 594
            A+W A  ++L  L   W+
Sbjct: 1664 ADWFANQSRLRMLCRDWR 1681


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
 Frame = +3

Query: 129  KVMDNSFSKWEKPLE*QLKVNTDGAWNYTTKEAGIGCIIRNSEGITLLAAAAYHESP-SI 305
            +V+  S  +W+ P   QLKVN DGA N+  +  G G IIR+  G  ++A     + P S 
Sbjct: 1481 EVVPGSLRRWQAPSSGQLKVNCDGAANFKDRCFGGGTIIRDEFGSLIVAGGKNFQHPVSS 1540

Query: 306  LYSELLAIK 332
            L +ELLAIK
Sbjct: 1541 LVAELLAIK 1549



 Score = 32.3 bits (72), Expect(2) = 1e-06
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = +1

Query: 382  IHIESDSLEAIQAIIGKNAHTPVETHRLLQEIQ-LMKSMRIYCFRRIRREGNEPANWLAG 558
            I +ESD LEAI  +  K      E   L+++IQ  M  + I     +RREGN  A+ +A 
Sbjct: 1563 IMVESDCLEAIHLLNSKERCLAPEGG-LVEDIQNTMALVNISSIYHVRREGNTAAHAIA- 1620

Query: 559  HAKLFRLQNVWKDNGQLIW 615
                   + V ++NG+ +W
Sbjct: 1621 -------KFVARNNGRYVW 1632


>gb|OMO94917.1| reverse transcriptase [Corchorus capsularis]
          Length = 1924

 Score = 51.2 bits (121), Expect(2) = 2e-06
 Identities = 30/69 (43%), Positives = 38/69 (55%)
 Frame = +3

Query: 156  WEKPLE*QLKVNTDGAWNYTTKEAGIGCIIRNSEGITLLAAAAYHESPSILYSELLAIKS 335
            WE+P E   KVN DGA+   T +AGIG IIR+  G  +  A       S+L SE LA+K 
Sbjct: 1757 WERPKEGWCKVNCDGAYCSKTSKAGIGIIIRDHNGNLIDGAGKMVIGDSVLISEALAVKE 1816

Query: 336  ENELHPLKH 362
              +L  L H
Sbjct: 1817 GMKLAHLLH 1825



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
 Frame = +1

Query: 373  AHTIHIESDSLEAIQAIIGKNAHTPV-----ETHRLLQEIQLMKS-MRIYCFRRIRREGN 534
            AH +HIE   +E    I+ K+   P+     +   ++ +I  +K+      F+ ++RE N
Sbjct: 1821 AHLLHIEQVVVEMDCEILFKSILNPIVGSDWKIRPIVADIVSLKNCFNAVEFKCVKREAN 1880

Query: 535  EPANWLAGHAKL 570
              A+W+A  ++L
Sbjct: 1881 MAADWVAVQSRL 1892