BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00051599
         (461 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009385728.1| PREDICTED: DNA-directed RNA polymerase III s...   137   2e-34
ref|XP_020112552.1| DNA-directed RNA polymerase III subunit 2 [A...   124   6e-30
ref|XP_010905752.1| PREDICTED: DNA-directed RNA polymerase III s...   124   8e-30
ref|XP_008788751.1| PREDICTED: DNA-directed RNA polymerase III s...   123   1e-29
gb|KVH97879.1| DNA-directed RNA polymerase, subunit 2 [Cynara ca...   102   4e-24
ref|XP_020576393.1| DNA-directed RNA polymerase III subunit 2 is...   102   2e-22
ref|XP_020576392.1| DNA-directed RNA polymerase III subunit 2 is...   102   2e-22
ref|XP_022895778.1| DNA-directed RNA polymerase III subunit 2 [O...   102   2e-22
gb|PKU69434.1| DNA-directed RNA polymerase II subunit RPB2 [Dend...   100   1e-21
ref|XP_020673624.1| DNA-directed RNA polymerase III subunit 2 [D...   100   1e-21
ref|XP_022035620.1| DNA-directed RNA polymerase III subunit 2 [H...   100   2e-21
ref|XP_011085923.1| DNA-directed RNA polymerase III subunit 2 [S...   100   2e-21
gb|PIN14066.1| RNA polymerase III, second largest subunit [Handr...    99   4e-21
gb|PPR83368.1| hypothetical protein GOBAR_AA37342 [Gossypium bar...    96   7e-21
gb|AFJ91760.1| RNA polymerase III polypeptide b, partial [Ostrea...    91   8e-21
ref|XP_021832455.1| DNA-directed RNA polymerase III subunit 2-li...    91   1e-20
ref|XP_011003287.1| PREDICTED: DNA-directed RNA polymerase III s...    98   1e-20
ref|XP_011003286.1| PREDICTED: DNA-directed RNA polymerase III s...    98   1e-20
ref|XP_021832464.1| DNA-directed RNA polymerase III subunit 2-li...    92   1e-20
gb|AQK80010.1| DNA-directed RNA polymerase III subunit 2 [Zea mays]    96   2e-20

>ref|XP_009385728.1| PREDICTED: DNA-directed RNA polymerase III subunit 2 [Musa
           acuminata subsp. malaccensis]
          Length = 1152

 Score =  137 bits (345), Expect = 2e-34
 Identities = 69/79 (87%), Positives = 71/79 (89%)
 Frame = -3

Query: 237 MGFLQDELEGGSVKSLAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMK 58
           MG L D+    S KSLAAP+KSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMK
Sbjct: 1   MGVLPDDAVA-STKSLAAPVKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMK 59

Query: 57  ANDLLVCRHDPGFYLRYTN 1
           ANDLLVCRHDP FYLRYTN
Sbjct: 60  ANDLLVCRHDPTFYLRYTN 78


>ref|XP_020112552.1| DNA-directed RNA polymerase III subunit 2 [Ananas comosus]
          Length = 1150

 Score =  124 bits (311), Expect = 6e-30
 Identities = 62/79 (78%), Positives = 68/79 (86%)
 Frame = -3

Query: 237 MGFLQDELEGGSVKSLAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMK 58
           MGF Q+E    S + LAAP+KSAVDKFQLLPAFL+VRGLVKQHIDSFNYFINH++KKIMK
Sbjct: 1   MGFGQEE---DSQRCLAAPVKSAVDKFQLLPAFLKVRGLVKQHIDSFNYFINHEMKKIMK 57

Query: 57  ANDLLVCRHDPGFYLRYTN 1
           ANDLLV  HDP  YLRYTN
Sbjct: 58  ANDLLVAHHDPNIYLRYTN 76


>ref|XP_010905752.1| PREDICTED: DNA-directed RNA polymerase III subunit 2 isoform X1
           [Elaeis guineensis]
          Length = 1149

 Score =  124 bits (310), Expect = 8e-30
 Identities = 59/68 (86%), Positives = 63/68 (92%)
 Frame = -3

Query: 204 SVKSLAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMKANDLLVCRHDP 25
           S+K L AP+KSAVDKFQLLPAFL+VRGLVKQHIDSFNYFINHDIKKIMKAND LVCR+DP
Sbjct: 10  SLKILTAPVKSAVDKFQLLPAFLKVRGLVKQHIDSFNYFINHDIKKIMKANDRLVCRYDP 69

Query: 24  GFYLRYTN 1
             YLRYTN
Sbjct: 70  DLYLRYTN 77


>ref|XP_008788751.1| PREDICTED: DNA-directed RNA polymerase III subunit 2 [Phoenix
           dactylifera]
          Length = 1110

 Score =  123 bits (308), Expect = 1e-29
 Identities = 59/68 (86%), Positives = 64/68 (94%)
 Frame = -3

Query: 204 SVKSLAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMKANDLLVCRHDP 25
           S+K+LAAP+KSAVDKFQLLPAFL+VRGLVKQHIDSFNYFINHDIKKIMKAND LVCR+DP
Sbjct: 37  SLKTLAAPVKSAVDKFQLLPAFLKVRGLVKQHIDSFNYFINHDIKKIMKANDRLVCRYDP 96

Query: 24  GFYLRYTN 1
              LRYTN
Sbjct: 97  DLCLRYTN 104


>gb|KVH97879.1| DNA-directed RNA polymerase, subunit 2 [Cynara cardunculus var.
           scolymus]
          Length = 198

 Score =  102 bits (253), Expect = 4e-24
 Identities = 52/83 (62%), Positives = 64/83 (77%)
 Frame = -3

Query: 255 ENSCSLMGFLQDELEGGSVKSLAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHD 76
           E+S  L   LQ   EG   + LAAP+KSAVDKFQLLP FL+VRGLVKQH++SFNYF+  +
Sbjct: 5   EDSAMLDASLQGS-EGLDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLESFNYFVKTE 63

Query: 75  IKKIMKANDLLVCRHDPGFYLRY 7
           IKKI++ANDL+  R+DP  YLRY
Sbjct: 64  IKKIVRANDLVTSRYDPSVYLRY 86


>ref|XP_020576393.1| DNA-directed RNA polymerase III subunit 2 isoform X2 [Phalaenopsis
           equestris]
          Length = 1125

 Score =  102 bits (255), Expect = 2e-22
 Identities = 48/64 (75%), Positives = 54/64 (84%)
 Frame = -3

Query: 195 SLAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMKANDLLVCRHDPGFY 16
           +LA P+KSAVDKF LLP FL+VRGLVKQHIDSFNYF NH IKKI+KAND +VC  +P  Y
Sbjct: 9   NLAKPIKSAVDKFALLPEFLKVRGLVKQHIDSFNYFTNHGIKKIIKANDRIVCSQNPSLY 68

Query: 15  LRYT 4
           LRYT
Sbjct: 69  LRYT 72


>ref|XP_020576392.1| DNA-directed RNA polymerase III subunit 2 isoform X1 [Phalaenopsis
           equestris]
          Length = 1145

 Score =  102 bits (255), Expect = 2e-22
 Identities = 48/64 (75%), Positives = 54/64 (84%)
 Frame = -3

Query: 195 SLAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMKANDLLVCRHDPGFY 16
           +LA P+KSAVDKF LLP FL+VRGLVKQHIDSFNYF NH IKKI+KAND +VC  +P  Y
Sbjct: 9   NLAKPIKSAVDKFALLPEFLKVRGLVKQHIDSFNYFTNHGIKKIIKANDRIVCSQNPSLY 68

Query: 15  LRYT 4
           LRYT
Sbjct: 69  LRYT 72


>ref|XP_022895778.1| DNA-directed RNA polymerase III subunit 2 [Olea europaea var.
           sylvestris]
 ref|XP_022895779.1| DNA-directed RNA polymerase III subunit 2 [Olea europaea var.
           sylvestris]
          Length = 1154

 Score =  102 bits (255), Expect = 2e-22
 Identities = 49/84 (58%), Positives = 64/84 (76%)
 Frame = -3

Query: 258 RENSCSLMGFLQDELEGGSVKSLAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINH 79
           +E   +L+  LQ++      ++LAAP+KSAVDKFQLLP FL+VRGLVKQH+DSFNYF+  
Sbjct: 4   KEEDSALLNDLQEQRLNVDKQALAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRT 63

Query: 78  DIKKIMKANDLLVCRHDPGFYLRY 7
            IK+I++ANDL+  R DP  YLRY
Sbjct: 64  QIKQIVRANDLITSRIDPSIYLRY 87


>gb|PKU69434.1| DNA-directed RNA polymerase II subunit RPB2 [Dendrobium catenatum]
          Length = 602

 Score =  100 bits (249), Expect = 1e-21
 Identities = 47/62 (75%), Positives = 52/62 (83%)
 Frame = -3

Query: 189 AAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMKANDLLVCRHDPGFYLR 10
           A P+KSAVDKF LLP FL+VRGLVKQHIDSFNYFIN++IKKIMK ND + C  DP  YLR
Sbjct: 16  AKPIKSAVDKFALLPEFLKVRGLVKQHIDSFNYFINNEIKKIMKTNDRIECPQDPSLYLR 75

Query: 9   YT 4
           YT
Sbjct: 76  YT 77


>ref|XP_020673624.1| DNA-directed RNA polymerase III subunit 2 [Dendrobium catenatum]
          Length = 1150

 Score =  100 bits (249), Expect = 1e-21
 Identities = 47/62 (75%), Positives = 52/62 (83%)
 Frame = -3

Query: 189 AAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMKANDLLVCRHDPGFYLR 10
           A P+KSAVDKF LLP FL+VRGLVKQHIDSFNYFIN++IKKIMK ND + C  DP  YLR
Sbjct: 16  AKPIKSAVDKFALLPEFLKVRGLVKQHIDSFNYFINNEIKKIMKTNDRIECPQDPSLYLR 75

Query: 9   YT 4
           YT
Sbjct: 76  YT 77


>ref|XP_022035620.1| DNA-directed RNA polymerase III subunit 2 [Helianthus annuus]
 gb|OTG29218.1| putative nuclear RNA polymerase C2 [Helianthus annuus]
          Length = 1143

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 46/64 (71%), Positives = 55/64 (85%)
 Frame = -3

Query: 192 LAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMKANDLLVCRHDPGFYL 13
           LAAP+KSAVDKFQLLP FL+VRGLVKQH+DSFNYF+  +IKKI+ AN L+  RHDP  Y+
Sbjct: 25  LAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANSLVTSRHDPMVYI 84

Query: 12  RYTN 1
           RYT+
Sbjct: 85  RYTD 88


>ref|XP_011085923.1| DNA-directed RNA polymerase III subunit 2 [Sesamum indicum]
          Length = 1152

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 50/84 (59%), Positives = 65/84 (77%)
 Frame = -3

Query: 258 RENSCSLMGFLQDELEGGSVKSLAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINH 79
           REN  +L   L+++  G   ++LAAP+K+AVDKFQLLP FL+VRGLVKQH+DSFNYF+  
Sbjct: 4   RENDPALSD-LEEKSLGIDKQALAAPVKNAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRT 62

Query: 78  DIKKIMKANDLLVCRHDPGFYLRY 7
            IKKI++ANDL+  + DP  YLRY
Sbjct: 63  QIKKIVQANDLITSKIDPSIYLRY 86


>gb|PIN14066.1| RNA polymerase III, second largest subunit [Handroanthus
           impetiginosus]
          Length = 1153

 Score = 99.0 bits (245), Expect = 4e-21
 Identities = 49/84 (58%), Positives = 63/84 (75%)
 Frame = -3

Query: 258 RENSCSLMGFLQDELEGGSVKSLAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINH 79
           RE+   L   LQ++      ++LAAP+K+AVDKFQL+P FL+VRGLVKQH+DSFNYF+  
Sbjct: 4   REDDPVLFNDLQEKGLDIDKQALAAPVKNAVDKFQLIPEFLKVRGLVKQHLDSFNYFVRT 63

Query: 78  DIKKIMKANDLLVCRHDPGFYLRY 7
            IKKI++ANDL+  R DP  YLRY
Sbjct: 64  QIKKIVQANDLITSRIDPNIYLRY 87


>gb|PPR83368.1| hypothetical protein GOBAR_AA37342 [Gossypium barbadense]
          Length = 324

 Score = 96.3 bits (238), Expect = 7e-21
 Identities = 44/66 (66%), Positives = 55/66 (83%)
 Frame = -3

Query: 198 KSLAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMKANDLLVCRHDPGF 19
           + LAAP+KS VDKFQLLP FL+VRGLVKQH+DSFNYF+N  IKK++ AND +V   DPG 
Sbjct: 27  QKLAAPIKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKVVSANDRIVSYIDPGI 86

Query: 18  YLRYTN 1
           YLR+++
Sbjct: 87  YLRFSD 92


>gb|AFJ91760.1| RNA polymerase III polypeptide b, partial [Ostrea edulis]
          Length = 106

 Score = 90.9 bits (224), Expect = 8e-21
 Identities = 41/66 (62%), Positives = 55/66 (83%)
 Frame = -3

Query: 198 KSLAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMKANDLLVCRHDPGF 19
           + LAAP+K+  +K++LLPAFL+V+GLVKQHIDSFNYFIN +I+ IMKAND ++   DP F
Sbjct: 13  EKLAAPIKTIEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIRSIMKANDKILSDADPNF 72

Query: 18  YLRYTN 1
           Y++Y N
Sbjct: 73  YMKYLN 78


>ref|XP_021832455.1| DNA-directed RNA polymerase III subunit 2-like [Prunus avium]
          Length = 101

 Score = 90.5 bits (223), Expect = 1e-20
 Identities = 43/61 (70%), Positives = 50/61 (81%)
 Frame = -3

Query: 192 LAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMKANDLLVCRHDPGFYL 13
           LAAP+KSA DKF LLP FL+VRGLVKQH+DSFNYF+N  IKKI++AND +V   DP  YL
Sbjct: 35  LAAPIKSATDKFALLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGVDPSIYL 94

Query: 12  R 10
           R
Sbjct: 95  R 95


>ref|XP_011003287.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X2
           [Populus euphratica]
          Length = 1150

 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = -3

Query: 198 KSLAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMKANDLLVCRHDPGF 19
           K  AAP+KSAVDKFQLLP FL+VRGLVKQH+DSFNYFIN  IKKI++AND +V   DP  
Sbjct: 23  KHAAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFINIGIKKIVRANDRIVSTVDPSL 82

Query: 18  YLRYTN 1
           YLR+T+
Sbjct: 83  YLRFTD 88


>ref|XP_011003286.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X1
           [Populus euphratica]
          Length = 1151

 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = -3

Query: 198 KSLAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMKANDLLVCRHDPGF 19
           K  AAP+KSAVDKFQLLP FL+VRGLVKQH+DSFNYFIN  IKKI++AND +V   DP  
Sbjct: 23  KHAAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFINIGIKKIVRANDRIVSTVDPSL 82

Query: 18  YLRYTN 1
           YLR+T+
Sbjct: 83  YLRFTD 88


>ref|XP_021832464.1| DNA-directed RNA polymerase III subunit 2-like [Prunus avium]
          Length = 153

 Score = 91.7 bits (226), Expect = 1e-20
 Identities = 43/62 (69%), Positives = 51/62 (82%)
 Frame = -3

Query: 192 LAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIMKANDLLVCRHDPGFYL 13
           LAAP+KSA DKF LLP FL+VRGLVKQH+DSFNYF+N  IKKI++AND +V   DP  YL
Sbjct: 62  LAAPIKSATDKFALLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGIDPSIYL 121

Query: 12  RY 7
           R+
Sbjct: 122 RF 123


>gb|AQK80010.1| DNA-directed RNA polymerase III subunit 2 [Zea mays]
          Length = 372

 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 46/79 (58%), Positives = 60/79 (75%)
 Frame = -3

Query: 243 SLMGFLQDELEGGSVKSLAAPMKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKI 64
           S  G + D +   + +SLAAP++  VDKF LLPAFL+VRGLVK+HIDSFNYF+N  IKKI
Sbjct: 9   SQSGTVADTVPLPTYRSLAAPVRKPVDKFALLPAFLKVRGLVKEHIDSFNYFVNKGIKKI 68

Query: 63  MKANDLLVCRHDPGFYLRY 7
           ++AN+ +  R+DP  YLRY
Sbjct: 69  VEANNRIEARNDPSIYLRY 87