BLASTX nr result
ID: Cheilocostus21_contig00051246
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00051246
(600 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus] 215 1e-68
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration... 206 1e-67
gb|AHG32726.1| ORF3, partial [Dioscorea rotundata] 211 1e-67
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor... 205 5e-67
gb|APB42235.1| ORF3 [Dioscorea bacilliform virus] 204 3e-66
gb|ASA40120.1| ORF3 [Dioscorea bacilliform virus] 203 5e-66
gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus] 207 2e-65
gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus] 207 2e-65
gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus] 207 2e-65
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962... 199 3e-65
gb|ANK58545.1| polyprotein [Fig badnavirus 1] 200 5e-65
gb|ANK58548.1| polyprotein [Fig badnavirus 1] 199 1e-64
gb|ANK58542.1| polyprotein [Fig badnavirus 1] 199 1e-64
gb|ANK58539.1| polyprotein [Fig badnavirus 1] 199 1e-64
gb|ANK58536.1| polyprotein [Fig badnavirus 1] 199 1e-64
gb|AHG32725.1| ORF3, partial [Dioscorea rotundata] 200 2e-64
gb|ANV20884.1| ORF3 protein [Dioscorea bacilliform AL virus] 200 2e-64
emb|CAA64703.1| polyprotein, partial [Dioscorea bacilliform virus] 201 2e-64
gb|ATW01249.1| ORF3 protein [Dioscorea bacilliform RT virus] 200 5e-64
gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus] 199 5e-64
>gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]
Length = 1946
Score = 215 bits (548), Expect(2) = 1e-68
Identities = 98/136 (72%), Positives = 121/136 (88%)
Frame = -2
Query: 410 RSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*LQK 231
+ F + P I LK+ GFIGE+PM+HW KN+VTC+LDIINPD TI D+PLKHVTP +Q+
Sbjct: 1422 KEFCQRIEPTIKALKEQGFIGEEPMKHWVKNKVTCKLDIINPDLTIEDRPLKHVTPQMQE 1481
Query: 230 ALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLNDNT 51
A K+HVQALL+LKVIRPS+SRHRTTA+IV+SGTT+DPKTG E+KG+ER+VFNYKRLNDNT
Sbjct: 1482 AFKKHVQALLKLKVIRPSQSRHRTTAIIVYSGTTVDPKTGKEVKGKERMVFNYKRLNDNT 1541
Query: 50 NKDQYSLPGISSIIKK 3
NKDQYSLPGI++II++
Sbjct: 1542 NKDQYSLPGINTIIQR 1557
Score = 72.8 bits (177), Expect(2) = 1e-68
Identities = 35/68 (51%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTSP--KVLAALEEINLDEEEYLAIKEAVYYN 427
GCNF++AM GG+RIEGN VTFYKN+TTI T P A++EE++L+EEE++++ +A
Sbjct: 1358 GCNFIRAMAGGIRIEGNEVTFYKNVTTIKTLPYASAAASIEELDLEEEEFISLTQAAEPT 1417
Query: 426 LEVSKKEF 403
+ + KEF
Sbjct: 1418 V-TNNKEF 1424
>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1789
Score = 206 bits (523), Expect(2) = 1e-67
Identities = 94/137 (68%), Positives = 121/137 (88%)
Frame = -2
Query: 413 RRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*LQ 234
R SF +F PLI +LK+AG+IGE+P++HW+KN V CQLDI NPDF I D+PLK VTP ++
Sbjct: 1241 RESFLKRFKPLIEELKEAGYIGENPLQHWSKNGVLCQLDIKNPDFIIEDRPLKSVTPQMK 1300
Query: 233 KALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLNDN 54
++ K+HV+ALL+L+VIRPSKSRHRTTAM+V+SGTT+DPKTG E KG+ER+VFNYKRLND
Sbjct: 1301 ESFKKHVKALLDLRVIRPSKSRHRTTAMLVNSGTTVDPKTGKETKGKERMVFNYKRLNDI 1360
Query: 53 TNKDQYSLPGISSIIKK 3
T+KDQYSLPGI++I+K+
Sbjct: 1361 THKDQYSLPGINTILKR 1377
Score = 79.3 bits (194), Expect(2) = 1e-67
Identities = 40/67 (59%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTSPKV-LAALEEINLDEEEYLAIKEAVYYNL 424
GCNF++AM GGVRIEGN VTFYKNLT I+TSP+V + +LEE + EEEYL ++E V N+
Sbjct: 1178 GCNFIRAMYGGVRIEGNEVTFYKNLTRISTSPEVTVNSLEEEEVCEEEYLQVQEMVICNI 1237
Query: 423 EVSKKEF 403
S++ F
Sbjct: 1238 GESRESF 1244
>gb|AHG32726.1| ORF3, partial [Dioscorea rotundata]
Length = 579
Score = 211 bits (538), Expect(2) = 1e-67
Identities = 97/138 (70%), Positives = 121/138 (87%)
Frame = -2
Query: 416 VRRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*L 237
V +F KF LI +LK+AG+IGE+PM+ WA+N+VTC+LDIINPD TI DKPLKHVTP +
Sbjct: 173 VNINFTQKFGDLIQELKNAGYIGEEPMKFWAQNKVTCKLDIINPDLTIQDKPLKHVTPSM 232
Query: 236 QKALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLND 57
++A ++H+QALL+LKVIRPS S+HRTTA IVHSGTT+DPKTG E KG+ER+VFNYKRLND
Sbjct: 233 EEAFRKHIQALLKLKVIRPSTSKHRTTAFIVHSGTTVDPKTGVETKGKERMVFNYKRLND 292
Query: 56 NTNKDQYSLPGISSIIKK 3
NT KDQYSLPGI++I+K+
Sbjct: 293 NTEKDQYSLPGINTILKR 310
Score = 73.6 bits (179), Expect(2) = 1e-67
Identities = 36/57 (63%), Positives = 48/57 (84%), Gaps = 3/57 (5%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTS---PKVLAALEEINLDEEEYLAIKEA 439
GCNF+++M GGVRIEG+ VTFYKN+TTI T PKVL ALEE+ ++EEEY+A++E+
Sbjct: 110 GCNFIRSMNGGVRIEGDEVTFYKNVTTIKTQQEVPKVL-ALEELEMEEEEYIAMQES 165
>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1830
Score = 205 bits (522), Expect(2) = 5e-67
Identities = 95/137 (69%), Positives = 119/137 (86%)
Frame = -2
Query: 413 RRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*LQ 234
R SF KF PLI + ++AG+IGE+P++HW KN V CQLDI NPDF I D+PLK VTP ++
Sbjct: 1204 RESFLKKFKPLIEEFQEAGYIGENPLQHWEKNGVLCQLDIKNPDFIIEDRPLKSVTPQMK 1263
Query: 233 KALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLNDN 54
++ KRHV+ALL+LKVIRPSKSRHRTTAM+V+SGTT+DPKTG E KG+ER+VFNYKRLND
Sbjct: 1264 ESFKRHVKALLDLKVIRPSKSRHRTTAMLVNSGTTVDPKTGKETKGKERMVFNYKRLNDI 1323
Query: 53 TNKDQYSLPGISSIIKK 3
T+KDQYSLPGI++I+K+
Sbjct: 1324 THKDQYSLPGINTILKR 1340
Score = 77.4 bits (189), Expect(2) = 5e-67
Identities = 38/66 (57%), Positives = 49/66 (74%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTSPKVLAALEEINLDEEEYLAIKEAVYYNLE 421
GCNF++AM GGVRIEGN VTFYKNLT I+TSP+V + E + EEEYL I++ V N+
Sbjct: 1142 GCNFIRAMYGGVRIEGNEVTFYKNLTKISTSPEVSVNVLEEEVCEEEYLQIQDMVVCNIG 1201
Query: 420 VSKKEF 403
S++ F
Sbjct: 1202 ESRESF 1207
>gb|APB42235.1| ORF3 [Dioscorea bacilliform virus]
Length = 1897
Score = 204 bits (520), Expect(2) = 3e-66
Identities = 94/138 (68%), Positives = 119/138 (86%)
Frame = -2
Query: 416 VRRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*L 237
V +F +F LI +LK AG+IGE+PM+ W+ N+VTC+L+IINP+ TI DKPLKHVTP +
Sbjct: 1359 VNINFAQRFEDLILELKSAGYIGEEPMKFWSHNKVTCKLEIINPELTIQDKPLKHVTPSM 1418
Query: 236 QKALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLND 57
++A ++HVQALL+LKVIRPS SRHRTTA IVHSGTT+DPKTG E KG+ER+VFNY+RLND
Sbjct: 1419 EEAFRKHVQALLKLKVIRPSTSRHRTTAFIVHSGTTVDPKTGVETKGKERMVFNYRRLND 1478
Query: 56 NTNKDQYSLPGISSIIKK 3
NT KDQYSLPGI++I+K+
Sbjct: 1479 NTEKDQYSLPGINTILKR 1496
Score = 75.5 bits (184), Expect(2) = 3e-66
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 3/57 (5%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTS---PKVLAALEEINLDEEEYLAIKEA 439
GCNF+++M GGVRIEGN VTFYKN+TTI T PKVL ALEE+ + EEEY+AI+E+
Sbjct: 1296 GCNFIRSMNGGVRIEGNEVTFYKNVTTIQTQQEVPKVL-ALEELEMGEEEYIAIQES 1351
>gb|ASA40120.1| ORF3 [Dioscorea bacilliform virus]
Length = 2005
Score = 203 bits (517), Expect(2) = 5e-66
Identities = 93/128 (72%), Positives = 114/128 (89%)
Frame = -2
Query: 386 PLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*LQKALKRHVQA 207
P++ LKD GFIGE+PM+HW KN+V C LDIINPD I D+PLKHVTP +Q++ K+HVQA
Sbjct: 1492 PILRALKDQGFIGEEPMKHWQKNQVVCTLDIINPDLVIEDRPLKHVTPQMQESFKKHVQA 1551
Query: 206 LLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLNDNTNKDQYSLP 27
LL++ VIRPSKSRHRTTA+IV+SGTT+DPKTG E KG+ER+VFNYKRLNDNTNKDQYSLP
Sbjct: 1552 LLKMGVIRPSKSRHRTTAIIVYSGTTVDPKTGKESKGKERMVFNYKRLNDNTNKDQYSLP 1611
Query: 26 GISSIIKK 3
GI++II++
Sbjct: 1612 GINTIIQR 1619
Score = 75.9 bits (185), Expect(2) = 5e-66
Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTSP---KVLAALEEINLDEEEYLAIKEAVYY 430
GCNF+++M GGVRIEGN VTFYKN+TTI T P K +AA+EE++L+EEEY++I +
Sbjct: 1422 GCNFIRSMGGGVRIEGNDVTFYKNVTTIKTLPYSSKTVAAIEELDLEEEEYISIASSTPK 1481
Query: 429 NLEVSKK 409
+ SK+
Sbjct: 1482 AAQSSKE 1488
>gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus]
Length = 1921
Score = 207 bits (527), Expect(2) = 2e-65
Identities = 94/138 (68%), Positives = 119/138 (86%)
Frame = -2
Query: 416 VRRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*L 237
+ SF +F LI +LK+AG++GE+PM+ W +N+VTC+LDIINP+ I DKPLKHVTP +
Sbjct: 1362 IHSSFTTRFGDLIQKLKEAGYVGEEPMKFWQQNKVTCKLDIINPELRIQDKPLKHVTPAM 1421
Query: 236 QKALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLND 57
++ ++HVQALL+LKVIRPS S+HRTTA IVHSGTTIDPKTG E+KG+ERLVFNYKRLND
Sbjct: 1422 EETFRKHVQALLKLKVIRPSTSKHRTTAFIVHSGTTIDPKTGVEVKGKERLVFNYKRLND 1481
Query: 56 NTNKDQYSLPGISSIIKK 3
NT KDQYSLPGI++I+K+
Sbjct: 1482 NTEKDQYSLPGINTILKR 1499
Score = 70.1 bits (170), Expect(2) = 2e-65
Identities = 31/57 (54%), Positives = 48/57 (84%), Gaps = 2/57 (3%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTSPKV--LAALEEINLDEEEYLAIKEAV 436
GCNF+++M GGVRIEG+ VTFYKN+TTI T +V + +LEE+ ++E+EY++I+++V
Sbjct: 1299 GCNFIRSMSGGVRIEGDNVTFYKNVTTIKTQQEVSKVLSLEELEMNEDEYISIQQSV 1355
>gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus]
Length = 1921
Score = 207 bits (527), Expect(2) = 2e-65
Identities = 94/138 (68%), Positives = 119/138 (86%)
Frame = -2
Query: 416 VRRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*L 237
+ SF +F LI +LK+AG++GE+PM+ W +N+VTC+LDIINP+ I DKPLKHVTP +
Sbjct: 1362 IHSSFTTRFGDLIQKLKEAGYVGEEPMKFWQQNKVTCKLDIINPELRIQDKPLKHVTPAM 1421
Query: 236 QKALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLND 57
++ ++HVQALL+LKVIRPS S+HRTTA IVHSGTTIDPKTG E+KG+ERLVFNYKRLND
Sbjct: 1422 EETFRKHVQALLKLKVIRPSTSKHRTTAFIVHSGTTIDPKTGVEVKGKERLVFNYKRLND 1481
Query: 56 NTNKDQYSLPGISSIIKK 3
NT KDQYSLPGI++I+K+
Sbjct: 1482 NTEKDQYSLPGINTILKR 1499
Score = 70.1 bits (170), Expect(2) = 2e-65
Identities = 31/57 (54%), Positives = 48/57 (84%), Gaps = 2/57 (3%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTSPKV--LAALEEINLDEEEYLAIKEAV 436
GCNF+++M GGVRIEG+ VTFYKN+TTI T +V + +LEE+ ++E+EY++I+++V
Sbjct: 1299 GCNFIRSMSGGVRIEGDNVTFYKNVTTIKTQQEVSKVLSLEELEMNEDEYISIQQSV 1355
>gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus]
Length = 1919
Score = 207 bits (527), Expect(2) = 2e-65
Identities = 94/138 (68%), Positives = 119/138 (86%)
Frame = -2
Query: 416 VRRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*L 237
+ SF +F LI +LK+AG++GE+PM+ W +N+VTC+LDIINP+ I DKPLKHVTP +
Sbjct: 1360 IHSSFTTRFGDLIQKLKEAGYVGEEPMKFWQQNKVTCKLDIINPELRIQDKPLKHVTPAM 1419
Query: 236 QKALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLND 57
++ ++HVQALL+LKVIRPS S+HRTTA IVHSGTTIDPKTG E+KG+ERLVFNYKRLND
Sbjct: 1420 EETFRKHVQALLKLKVIRPSTSKHRTTAFIVHSGTTIDPKTGVEVKGKERLVFNYKRLND 1479
Query: 56 NTNKDQYSLPGISSIIKK 3
NT KDQYSLPGI++I+K+
Sbjct: 1480 NTEKDQYSLPGINTILKR 1497
Score = 70.1 bits (170), Expect(2) = 2e-65
Identities = 31/57 (54%), Positives = 48/57 (84%), Gaps = 2/57 (3%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTSPKV--LAALEEINLDEEEYLAIKEAV 436
GCNF+++M GGVRIEG+ VTFYKN+TTI T +V + +LEE+ ++E+EY++I+++V
Sbjct: 1297 GCNFIRSMSGGVRIEGDNVTFYKNVTTIKTQQEVSKVLSLEELEMNEDEYISIQQSV 1353
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
gb|AEF56561.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 199 bits (507), Expect(2) = 3e-65
Identities = 91/137 (66%), Positives = 119/137 (86%)
Frame = -2
Query: 413 RRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*LQ 234
R+SF KF PL+ +LK+AGFIGE+P++HW KN + CQLDI NPDF I D+PLK++TP ++
Sbjct: 1225 RKSFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTPQMK 1284
Query: 233 KALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLNDN 54
++ K+H++ LL+L VIR SKSRHRTTAM+V+SGTT+DPKTG EIK +ER+VFNYKRLND
Sbjct: 1285 ESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKRKERMVFNYKRLNDI 1344
Query: 53 TNKDQYSLPGISSIIKK 3
T+KDQYSLPGI++I+KK
Sbjct: 1345 THKDQYSLPGINTILKK 1361
Score = 77.4 bits (189), Expect(2) = 3e-65
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTSPKVLAALEEINLDEEEYLAIKEAVYYNLE 421
GCNF++AM GGVRIEGN VTFYKNLT I+TSP+V + + EEEYL ++E V N+
Sbjct: 1163 GCNFIRAMYGGVRIEGNEVTFYKNLTRISTSPEVSVNSLDEEVCEEEYLQVQEMVICNIG 1222
Query: 420 VSKKEF 403
S+K F
Sbjct: 1223 ESRKSF 1228
>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 200 bits (509), Expect(2) = 5e-65
Identities = 92/137 (67%), Positives = 118/137 (86%)
Frame = -2
Query: 413 RRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*LQ 234
R SF KF PL+ +LK+AGFIGE+P++HW KN + CQLDI NPDF I D+PLK++TP ++
Sbjct: 1225 RESFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTPQMK 1284
Query: 233 KALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLNDN 54
++ K+H++ LL+L VIR SKSRHRTTAM+V+SGTT+DPKTG EIK EER+VFNYKRLND
Sbjct: 1285 ESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKREERMVFNYKRLNDI 1344
Query: 53 TNKDQYSLPGISSIIKK 3
T+KDQYSLPGI++I+KK
Sbjct: 1345 THKDQYSLPGINTILKK 1361
Score = 75.9 bits (185), Expect(2) = 5e-65
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTSPKVLAALEEINLDEEEYLAIKEAVYYNLE 421
GCNF++AM GGVRIEGN VTFYKNLT I+TSP+V + + EEEYL ++E V N+
Sbjct: 1163 GCNFIRAMYGGVRIEGNEVTFYKNLTRISTSPEVSVNSLDEEVCEEEYLQVQEMVICNIG 1222
Query: 420 VSKKEF 403
S++ F
Sbjct: 1223 ESRESF 1228
>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 199 bits (505), Expect(2) = 1e-64
Identities = 91/137 (66%), Positives = 118/137 (86%)
Frame = -2
Query: 413 RRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*LQ 234
R SF KF PL+ +LK+AGFIGE+P++HW KN + CQLDI NPDF I D+PLK++TP ++
Sbjct: 1225 RESFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTPQMK 1284
Query: 233 KALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLNDN 54
++ K+H++ LL+L VIR SKSRHRTTAM+V+SGTT+DPKTG EIK +ER+VFNYKRLND
Sbjct: 1285 ESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKRKERMVFNYKRLNDI 1344
Query: 53 TNKDQYSLPGISSIIKK 3
T+KDQYSLPGI++I+KK
Sbjct: 1345 THKDQYSLPGINTILKK 1361
Score = 75.9 bits (185), Expect(2) = 1e-64
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTSPKVLAALEEINLDEEEYLAIKEAVYYNLE 421
GCNF++AM GGVRIEGN VTFYKNLT I+TSP+V + + EEEYL ++E V N+
Sbjct: 1163 GCNFIRAMYGGVRIEGNEVTFYKNLTRISTSPEVSVNSLDEEVCEEEYLQVQEMVICNIG 1222
Query: 420 VSKKEF 403
S++ F
Sbjct: 1223 ESRESF 1228
>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 199 bits (505), Expect(2) = 1e-64
Identities = 91/137 (66%), Positives = 118/137 (86%)
Frame = -2
Query: 413 RRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*LQ 234
R SF KF PL+ +LK+AGFIGE+P++HW KN + CQLDI NPDF I D+PLK++T ++
Sbjct: 1225 RESFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTSQMK 1284
Query: 233 KALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLNDN 54
++ K+H++ LL+L VIR SKSRHRTTAM+V+SGTT+DPKTG EIKG+ER+VFNYKRLND
Sbjct: 1285 ESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKGKERMVFNYKRLNDI 1344
Query: 53 TNKDQYSLPGISSIIKK 3
T+KDQYSLPGI++I+KK
Sbjct: 1345 THKDQYSLPGINTILKK 1361
Score = 75.9 bits (185), Expect(2) = 1e-64
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTSPKVLAALEEINLDEEEYLAIKEAVYYNLE 421
GCNF++AM GGVRIEGN VTFYKNLT I+TSP+V + + EEEYL ++E V N+
Sbjct: 1163 GCNFIRAMYGGVRIEGNEVTFYKNLTRISTSPEVSVNSLDEEVCEEEYLQVQEMVICNIG 1222
Query: 420 VSKKEF 403
S++ F
Sbjct: 1223 ESRESF 1228
>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 199 bits (505), Expect(2) = 1e-64
Identities = 91/137 (66%), Positives = 118/137 (86%)
Frame = -2
Query: 413 RRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*LQ 234
R SF KF PL+ +LK+AGFIGE+P++HW KN + CQLDI NPDF I D+PLK++T ++
Sbjct: 1225 RESFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTSQMK 1284
Query: 233 KALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLNDN 54
++ K+H++ LL+L VIR SKSRHRTTAM+V+SGTT+DPKTG EIKG+ER+VFNYKRLND
Sbjct: 1285 ESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKGKERMVFNYKRLNDI 1344
Query: 53 TNKDQYSLPGISSIIKK 3
T+KDQYSLPGI++I+KK
Sbjct: 1345 THKDQYSLPGINTILKK 1361
Score = 75.9 bits (185), Expect(2) = 1e-64
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTSPKVLAALEEINLDEEEYLAIKEAVYYNLE 421
GCNF++AM GGVRIEGN VTFYKNLT I+TSP+V + + EEEYL ++E V N+
Sbjct: 1163 GCNFIRAMYGGVRIEGNEVTFYKNLTRISTSPEVSVNSLDEEVCEEEYLQVQEMVICNIG 1222
Query: 420 VSKKEF 403
S++ F
Sbjct: 1223 ESRESF 1228
>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 199 bits (505), Expect(2) = 1e-64
Identities = 91/137 (66%), Positives = 118/137 (86%)
Frame = -2
Query: 413 RRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*LQ 234
R SF KF PL+ +LK+AGFIGE+P++HW KN + CQLDI NPDF I D+PLK++TP ++
Sbjct: 1225 RESFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTPQMK 1284
Query: 233 KALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLNDN 54
++ K+H++ LL+L VIR SKSRHRTTAM+V+SGTT+DPKTG EIK +ER+VFNYKRLND
Sbjct: 1285 ESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKRKERMVFNYKRLNDI 1344
Query: 53 TNKDQYSLPGISSIIKK 3
T+KDQYSLPGI++I+KK
Sbjct: 1345 THKDQYSLPGINTILKK 1361
Score = 75.9 bits (185), Expect(2) = 1e-64
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTSPKVLAALEEINLDEEEYLAIKEAVYYNLE 421
GCNF++AM GGVRIEGN VTFYKNLT I+TSP+V + + EEEYL ++E V N+
Sbjct: 1163 GCNFIRAMYGGVRIEGNEVTFYKNLTRISTSPEVSVNSLDEEVCEEEYLQVQEMVICNIG 1222
Query: 420 VSKKEF 403
S++ F
Sbjct: 1223 ESRESF 1228
>gb|AHG32725.1| ORF3, partial [Dioscorea rotundata]
Length = 1257
Score = 200 bits (508), Expect(2) = 2e-64
Identities = 91/134 (67%), Positives = 115/134 (85%)
Frame = -2
Query: 404 FFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*LQKAL 225
F NK S ++ +LK AG+IG+DP++ W+KN+VTC+L+IINPD TI DKPLKHVTP + +
Sbjct: 722 FSNKLSQVLQELKQAGYIGDDPLKFWSKNQVTCELNIINPDLTIQDKPLKHVTPAMSETF 781
Query: 224 KRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLNDNTNK 45
++H+ ALL+LKVIR SKSRHRTTA IV+SGTT+DP TG E KG+ER+VFNYKRLNDNT K
Sbjct: 782 RKHIDALLKLKVIRESKSRHRTTAFIVYSGTTVDPTTGKEQKGKERMVFNYKRLNDNTEK 841
Query: 44 DQYSLPGISSIIKK 3
DQYSLPGI++I+KK
Sbjct: 842 DQYSLPGINTILKK 855
Score = 74.3 bits (181), Expect(2) = 2e-64
Identities = 33/57 (57%), Positives = 47/57 (82%), Gaps = 2/57 (3%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTSPKV--LAALEEINLDEEEYLAIKEAV 436
GCNF++AM GGVRIEG+ VTFYKN+TT+ T +V L ALEE+ +DE+EY+ ++++V
Sbjct: 657 GCNFIRAMNGGVRIEGDTVTFYKNVTTVKTQQQVPKLLALEELEMDEDEYIELQQSV 713
>gb|ANV20884.1| ORF3 protein [Dioscorea bacilliform AL virus]
Length = 1914
Score = 200 bits (508), Expect(2) = 2e-64
Identities = 94/148 (63%), Positives = 121/148 (81%)
Frame = -2
Query: 446 RKRYTITWK*VRRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMD 267
+ +Y+ ++ +F ++ LI QLK+AG+IGE+PM+ WAKN+V C+L+IINP+ TI D
Sbjct: 1362 QSKYSSICPVIQENFKARYEELIVQLKNAGYIGENPMKFWAKNKVQCKLEIINPNLTIQD 1421
Query: 266 KPLKHVTP*LQKALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEER 87
KPLKHVTP ++ K+HV ALLELKVIRPS S+HRTTA IV+SGTT+DP TG E KG+ER
Sbjct: 1422 KPLKHVTPAMEATFKKHVDALLELKVIRPSTSQHRTTAFIVYSGTTVDPATGKEKKGKER 1481
Query: 86 LVFNYKRLNDNTNKDQYSLPGISSIIKK 3
+VFNYKRLNDNT KDQYSLPGI++I+KK
Sbjct: 1482 MVFNYKRLNDNTEKDQYSLPGINTILKK 1509
Score = 73.9 bits (180), Expect(2) = 2e-64
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTS---PKVLAALEEINLDEEEYLAIK 445
GCNF+++M GGVRIEGN VTFYKN+TT+ T PK+L ALEE+ ++EEEYLA++
Sbjct: 1309 GCNFIRSMNGGVRIEGNDVTFYKNITTVKTQTEVPKIL-ALEELEMEEEEYLALQ 1362
>emb|CAA64703.1| polyprotein, partial [Dioscorea bacilliform virus]
Length = 338
Score = 201 bits (510), Expect(2) = 2e-64
Identities = 95/138 (68%), Positives = 117/138 (84%)
Frame = -2
Query: 416 VRRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*L 237
V+ +F ++ LI QLK+AG+IGE+PM+ WAKN+V C+L+IINP+ TI DKPLKHVTP +
Sbjct: 83 VQENFKVRYEELIIQLKNAGYIGENPMKFWAKNKVQCKLEIINPNLTIQDKPLKHVTPAM 142
Query: 236 QKALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLND 57
+ KRHV ALLELKVIRPS S+HRTTA IV+SGTT+DP TG E KG+ER+VFNYKRLND
Sbjct: 143 EATFKRHVDALLELKVIRPSTSQHRTTAFIVYSGTTVDPATGQEKKGKERMVFNYKRLND 202
Query: 56 NTNKDQYSLPGISSIIKK 3
NT KDQYSLPGI++I+KK
Sbjct: 203 NTEKDQYSLPGINTILKK 220
Score = 73.2 bits (178), Expect(2) = 2e-64
Identities = 34/55 (61%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTS---PKVLAALEEINLDEEEYLAIK 445
GCNF+++M GGVRIEGN VTFYKN+TT+ T PK+L ALEE+ ++EEEY+A++
Sbjct: 20 GCNFIRSMNGGVRIEGNDVTFYKNITTVKTQTEVPKIL-ALEELEMEEEEYIALQ 73
>gb|ATW01249.1| ORF3 protein [Dioscorea bacilliform RT virus]
Length = 1904
Score = 200 bits (509), Expect(2) = 5e-64
Identities = 91/134 (67%), Positives = 115/134 (85%)
Frame = -2
Query: 404 FFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*LQKAL 225
F NK S ++ +LK AG+IG+DP++ W+KN+VTC+L+IINPD TI DKPLKHVTP + +
Sbjct: 1369 FSNKLSQVLQELKQAGYIGDDPLKFWSKNQVTCELNIINPDLTIQDKPLKHVTPAMSETF 1428
Query: 224 KRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLNDNTNK 45
++H+ ALL+LKVIR SKSRHRTTA IV+SGTT+DP TG E KG+ER+VFNYKRLNDNT K
Sbjct: 1429 RKHIDALLKLKVIRESKSRHRTTAFIVYSGTTVDPSTGKEQKGKERMVFNYKRLNDNTEK 1488
Query: 44 DQYSLPGISSIIKK 3
DQYSLPGI++I+KK
Sbjct: 1489 DQYSLPGINTILKK 1502
Score = 72.4 bits (176), Expect(2) = 5e-64
Identities = 32/57 (56%), Positives = 47/57 (82%), Gaps = 2/57 (3%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTSPKV--LAALEEINLDEEEYLAIKEAV 436
GCNF++AM GGVRIEG+ VTFYKN+TT+ T +V L ALEE+ ++E+EY+ ++++V
Sbjct: 1304 GCNFIRAMNGGVRIEGDTVTFYKNVTTVKTQQQVPKLLALEELEMNEDEYIELQQSV 1360
>gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus]
Length = 1395
Score = 199 bits (507), Expect(2) = 5e-64
Identities = 94/138 (68%), Positives = 117/138 (84%)
Frame = -2
Query: 416 VRRSFFNKFSPLISQLKDAGFIGEDPMRHWAKNRVTCQLDIINPDFTIMDKPLKHVTP*L 237
V+ +F ++ LI QLK+AG+IGE+PM+ WAKN+V C+L+IINP+ TI DKPLKHVTP +
Sbjct: 859 VQDNFKARYEELIVQLKNAGYIGENPMKFWAKNKVQCKLEIINPNLTIQDKPLKHVTPAM 918
Query: 236 QKALKRHVQALLELKVIRPSKSRHRTTAMIVHSGTTIDPKTGGEIKGEERLVFNYKRLND 57
+ K+HV ALLELKVIRPS S+HRTTA IV+SGTT+DP TG E KG+ER+VFNYKRLND
Sbjct: 919 EATFKKHVDALLELKVIRPSSSQHRTTAFIVYSGTTVDPATGQEKKGKERMVFNYKRLND 978
Query: 56 NTNKDQYSLPGISSIIKK 3
NT KDQYSLPGI++I+KK
Sbjct: 979 NTEKDQYSLPGINTILKK 996
Score = 73.2 bits (178), Expect(2) = 5e-64
Identities = 34/55 (61%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 600 GCNFVKAMQGGVRIEGNIVTFYKNLTTINTS---PKVLAALEEINLDEEEYLAIK 445
GCNF+++M GGVRIEGN VTFYKN+TT+ T PK+L ALEE+ ++EEEY+A++
Sbjct: 796 GCNFIRSMNGGVRIEGNDVTFYKNITTVKTQTEVPKIL-ALEELEMEEEEYIALQ 849