BLASTX nr result
ID: Cheilocostus21_contig00051200
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00051200
(520 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008787393.1| PREDICTED: pentatricopeptide repeat-containi... 145 4e-51
ref|XP_009418282.1| PREDICTED: pentatricopeptide repeat-containi... 145 3e-50
ref|XP_010935759.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 139 1e-48
gb|OAY75785.1| Pentatricopeptide repeat-containing protein, mito... 138 5e-45
ref|XP_020112868.1| pentatricopeptide repeat-containing protein ... 138 5e-45
ref|XP_020593676.1| pentatricopeptide repeat-containing protein ... 126 4e-42
ref|XP_020682845.1| pentatricopeptide repeat-containing protein ... 117 1e-40
gb|PKU70880.1| Pentatricopeptide repeat-containing protein [Dend... 117 1e-40
ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containi... 109 5e-36
ref|XP_010262488.1| PREDICTED: pentatricopeptide repeat-containi... 100 6e-33
gb|KJB42239.1| hypothetical protein B456_007G144200 [Gossypium r... 100 4e-32
ref|XP_017612525.1| PREDICTED: pentatricopeptide repeat-containi... 103 7e-32
ref|XP_010501338.1| PREDICTED: pentatricopeptide repeat-containi... 103 9e-32
gb|PPD97530.1| hypothetical protein GOBAR_DD05426 [Gossypium bar... 103 3e-31
gb|PPR81554.1| hypothetical protein GOBAR_AA39156 [Gossypium bar... 103 3e-31
ref|XP_010457734.1| PREDICTED: pentatricopeptide repeat-containi... 102 6e-31
ref|XP_010480363.1| PREDICTED: pentatricopeptide repeat-containi... 100 7e-31
gb|OAP16609.1| MEF3 [Arabidopsis thaliana] 98 9e-31
ref|NP_172104.1| Pentatricopeptide repeat (PPR) superfamily prot... 98 9e-31
ref|XP_013643137.1| pentatricopeptide repeat-containing protein ... 99 1e-30
>ref|XP_008787393.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Phoenix dactylifera]
ref|XP_017697843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Phoenix dactylifera]
Length = 664
Score = 145 bits (367), Expect(2) = 4e-51
Identities = 69/116 (59%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLL-TNFYL 179
S+++++F LF RM E G+ + SAVCL RACGNV + KEGR +H +C+K N+L +N YL
Sbjct: 196 SMEVQVFGLFDRMKELGIGLDPCSAVCLARACGNVGAAKEGRVIHGLCIKKNVLDSNIYL 255
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGML 347
QTSL+D+YG SG +D AR++FDEM HKDVV WSSMIA LAQCGRA ++L F ML
Sbjct: 256 QTSLVDMYGKSGFMDFARRLFDEMPHKDVVSWSSMIAGLAQCGRAHESLLVFQDML 311
Score = 83.6 bits (205), Expect(2) = 4e-51
Identities = 42/65 (64%), Positives = 47/65 (72%)
Frame = +1
Query: 325 LIFSAGCWKSIVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMY 504
L+F SI PN VTLASVLLACSHLGALQQG+S+HAYMVR TALLDM+
Sbjct: 305 LVFQDMLGNSIAPNEVTLASVLLACSHLGALQQGKSVHAYMVRNEVELDVVTNTALLDMF 364
Query: 505 AKCGA 519
AKCG+
Sbjct: 365 AKCGS 369
>ref|XP_009418282.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Musa acuminata subsp. malaccensis]
Length = 584
Score = 145 bits (365), Expect(2) = 3e-50
Identities = 72/117 (61%), Positives = 90/117 (76%), Gaps = 1/117 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTN-FYL 179
S+D+KIFDLFH+M E G ++ QLSAV LVRACGN+Q+ K G +HAICLK N L +L
Sbjct: 194 SLDVKIFDLFHQMKELGHELDQLSAVYLVRACGNIQAAKAGCMLHAICLKKNFLEACIHL 253
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGMLE 350
QTSL+D+YG SG++D A+KMFDEM KDVV WSSM+ASLAQCGRA ++L M +
Sbjct: 254 QTSLVDMYGKSGMVDSAKKMFDEMPCKDVVSWSSMVASLAQCGRAWESLHLLRDMFD 310
Score = 81.6 bits (200), Expect(2) = 3e-50
Identities = 40/57 (70%), Positives = 46/57 (80%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCGA 519
+SI+PNAVTLAS LLACS+LGALQQG+S+HAYMVR TALLDMYAKCG+
Sbjct: 311 QSILPNAVTLASALLACSNLGALQQGKSVHAYMVRNNVELDVVSNTALLDMYAKCGS 367
Score = 62.0 bits (149), Expect(2) = 1e-11
Identities = 29/84 (34%), Positives = 50/84 (59%)
Frame = +3
Query: 93 ACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSLLDLYGNSGLIDLARKMFDEMMHKDVVP 272
AC N+ + ++G++VHA ++ N+ + T+LLD+Y G +++A K+F +M ++V
Sbjct: 326 ACSNLGALQQGKSVHAYMVRNNVELDVVSNTALLDMYAKCGSMEVAHKVFADMPERNVFS 385
Query: 273 WSSMIASLAQCGRACDALDFFGGM 344
WS+MI L G AL+ F M
Sbjct: 386 WSAMIGGLGMHGMCSRALELFEHM 409
Score = 34.7 bits (78), Expect(2) = 1e-11
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQGR 429
+++ PN+VT +VL ACSH G +++GR
Sbjct: 412 ENLAPNSVTFVAVLSACSHSGRVEEGR 438
>ref|XP_010935759.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g06140, mitochondrial [Elaeis guineensis]
Length = 689
Score = 139 bits (351), Expect(2) = 1e-48
Identities = 66/116 (56%), Positives = 87/116 (75%), Gaps = 1/116 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLL-TNFYL 179
S+++++F LF RM E G+ + SA+CL RACGNV + KEGR +H+ C+K N L +N Y+
Sbjct: 194 SMEVEVFGLFDRMKELGIGLDPCSAICLARACGNVGAAKEGRVIHSFCIKKNFLDSNVYM 253
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGML 347
QTSL+D+YG SG +D AR++FDEM HKDVV WSSMIA LAQ GRA ++L F ML
Sbjct: 254 QTSLVDMYGKSGFMDFARRLFDEMPHKDVVSWSSMIAGLAQSGRAHESLLVFQDML 309
Score = 81.6 bits (200), Expect(2) = 1e-48
Identities = 41/65 (63%), Positives = 46/65 (70%)
Frame = +1
Query: 325 LIFSAGCWKSIVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMY 504
L+F +VPN VTLASVLL CSHLGALQQG+S+HAYMVR TALLDMY
Sbjct: 303 LVFQDMLGNLMVPNEVTLASVLLGCSHLGALQQGKSVHAYMVRNEVELDVVTNTALLDMY 362
Query: 505 AKCGA 519
AKCG+
Sbjct: 363 AKCGS 367
Score = 55.8 bits (133), Expect(2) = 7e-10
Identities = 27/93 (29%), Positives = 51/93 (54%)
Frame = +3
Query: 66 QLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSLLDLYGNSGLIDLARKMFD 245
+++ ++ C ++ + ++G++VHA ++ + + T+LLD+Y G +DLA K+F+
Sbjct: 317 EVTLASVLLGCSHLGALQQGKSVHAYMVRNEVELDVVTNTALLDMYAKCGSMDLACKVFN 376
Query: 246 EMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
M ++V WS+MI G AL F M
Sbjct: 377 AMPERNVFSWSAMIGGFGMHGMCKKALALFDEM 409
Score = 35.0 bits (79), Expect(2) = 7e-10
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 352 SIVPNAVTLASVLLACSHLGALQQGR 429
++VPN+VT SVL AC H G +Q+G+
Sbjct: 413 NLVPNSVTFVSVLSACGHSGKVQEGQ 438
>gb|OAY75785.1| Pentatricopeptide repeat-containing protein, mitochondrial, partial
[Ananas comosus]
Length = 728
Score = 138 bits (348), Expect(2) = 5e-45
Identities = 69/117 (58%), Positives = 85/117 (72%), Gaps = 1/117 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLT-NFYL 179
SVD ++FDLF RM E L++ +AVCL RACGN+ + KEGRA+H C+KTN L N YL
Sbjct: 223 SVDEQVFDLFGRMKELKLELDPCAAVCLARACGNICAAKEGRAIHGFCIKTNYLDCNIYL 282
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGMLE 350
+TSL+D+YG SG ID A K+FDEM KDVV WSS+I+ LAQC R +AL F MLE
Sbjct: 283 KTSLVDMYGKSGFIDFALKLFDEMPSKDVVSWSSVISGLAQCRRGYEALRVFRDMLE 339
Score = 70.5 bits (171), Expect(2) = 5e-45
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCG 516
+SI+PN VT ASVLLAC+HLGA QG+S+H +M+R TAL+DMYAKCG
Sbjct: 340 ESIMPNEVTYASVLLACAHLGASFQGKSVHGFMIRSNIELDVVTNTALVDMYAKCG 395
Score = 58.9 bits (141), Expect(2) = 3e-10
Identities = 31/106 (29%), Positives = 57/106 (53%)
Frame = +3
Query: 27 LFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSLLDLYG 206
+F M E + +++ ++ AC ++ + +G++VH +++N+ + T+L+D+Y
Sbjct: 333 VFRDMLEESIMPNEVTYASVLLACAHLGASFQGKSVHGFMIRSNIELDVVTNTALVDMYA 392
Query: 207 NSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
G LA K+F M ++V WS+MI +L G ALD F M
Sbjct: 393 KCGFPLLAYKVFGIMPVRNVFSWSAMIGALGAHGMYSRALDLFDEM 438
Score = 33.1 bits (74), Expect(2) = 3e-10
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 352 SIVPNAVTLASVLLACSHLGALQQGR 429
++ PN VT SVL ACSH G ++ GR
Sbjct: 442 NLAPNHVTFVSVLSACSHSGMVKDGR 467
>ref|XP_020112868.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Ananas comosus]
Length = 718
Score = 138 bits (348), Expect(2) = 5e-45
Identities = 69/117 (58%), Positives = 85/117 (72%), Gaps = 1/117 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLT-NFYL 179
SVD ++FDLF RM E L++ +AVCL RACGN+ + KEGRA+H C+KTN L N YL
Sbjct: 223 SVDEQVFDLFGRMKELKLELDPCAAVCLARACGNICAAKEGRAIHGFCIKTNYLDCNIYL 282
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGMLE 350
+TSL+D+YG SG ID A K+FDEM KDVV WSS+I+ LAQC R +AL F MLE
Sbjct: 283 KTSLVDMYGKSGFIDFALKLFDEMPSKDVVSWSSVISGLAQCRRGYEALRVFRDMLE 339
Score = 70.5 bits (171), Expect(2) = 5e-45
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCG 516
+SI+PN VT ASVLLAC+HLGA QG+S+H +M+R TAL+DMYAKCG
Sbjct: 340 ESIMPNEVTYASVLLACAHLGASFQGKSVHGFMIRSNIELDVVTNTALVDMYAKCG 395
Score = 57.4 bits (137), Expect(2) = 1e-09
Identities = 30/106 (28%), Positives = 56/106 (52%)
Frame = +3
Query: 27 LFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSLLDLYG 206
+F M E + +++ ++ AC ++ + +G++VH +++N+ + T+L+D+Y
Sbjct: 333 VFRDMLEESIMPNEVTYASVLLACAHLGASFQGKSVHGFMIRSNIELDVVTNTALVDMYA 392
Query: 207 NSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
G LA K+F M ++V WS+MI + G ALD F M
Sbjct: 393 KCGFPLLAYKVFGIMPVRNVFSWSAMIGAFGAHGMYLRALDLFDEM 438
Score = 33.1 bits (74), Expect(2) = 1e-09
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 352 SIVPNAVTLASVLLACSHLGALQQGR 429
++ PN VT SVL ACSH G ++ GR
Sbjct: 442 NLAPNHVTFVSVLSACSHSGMVKDGR 467
>ref|XP_020593676.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Phalaenopsis equestris]
Length = 603
Score = 126 bits (317), Expect(2) = 4e-42
Identities = 58/117 (49%), Positives = 85/117 (72%), Gaps = 1/117 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTN-FYL 179
S+D+++ + FHRM E G+ + +AVCL RA GN + ++GRA+H++C+K+ ++ + YL
Sbjct: 192 SMDLQVMESFHRMRELGVQLNPCAAVCLARAYGNFAAARQGRAIHSLCIKSTVMASTVYL 251
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGMLE 350
QTSLLD+Y SG ID A +F E+ KDV+ WS+M+A LAQCGRA ++L F GMLE
Sbjct: 252 QTSLLDMYMKSGFIDCAHNLFVELPSKDVISWSTMVARLAQCGRAFESLQAFQGMLE 308
Score = 72.8 bits (177), Expect(2) = 4e-42
Identities = 35/57 (61%), Positives = 42/57 (73%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCGA 519
+SI+PNAVTL SVLLACSHLG+L QG+S+H Y+ R TALLDMYAK G+
Sbjct: 309 ESIIPNAVTLTSVLLACSHLGSLWQGKSVHGYIFRHAIELDIVAHTALLDMYAKAGS 365
Score = 57.0 bits (136), Expect(2) = 2e-09
Identities = 29/105 (27%), Positives = 53/105 (50%)
Frame = +3
Query: 30 FHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSLLDLYGN 209
F M E + ++ ++ AC ++ S +G++VH + + + T+LLD+Y
Sbjct: 303 FQGMLEESIIPNAVTLTSVLLACSHLGSLWQGKSVHGYIFRHAIELDIVAHTALLDMYAK 362
Query: 210 SGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
+G I +A K+F M +++ WS++I + G ALD F M
Sbjct: 363 AGSIKIAYKVFGRMQQRNIFSWSAIIGAFGMHGMGSRALDMFHEM 407
Score = 32.3 bits (72), Expect(2) = 2e-09
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 352 SIVPNAVTLASVLLACSHLGALQQG 426
+++PN+VT S+L ACSH G +++G
Sbjct: 411 NVLPNSVTFISLLSACSHSGRVREG 435
>ref|XP_020682845.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Dendrobium catenatum]
Length = 696
Score = 117 bits (294), Expect(2) = 1e-40
Identities = 57/117 (48%), Positives = 84/117 (71%), Gaps = 1/117 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLL-TNFYL 179
S+D+++ + F +M E + + +AVCL RA GN+ + K+GRA+HA+ +K+ L+ +N YL
Sbjct: 194 SMDLEVVECFDKMKELRVQLNPCAAVCLARAFGNLAAAKQGRAIHALFIKSALMASNVYL 253
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGMLE 350
QTSLLD+Y SG I+ A K+F E+ KD+V WS+M+A LAQCGR ++L F GMLE
Sbjct: 254 QTSLLDMYMKSGFIECAHKLFGELPCKDIVSWSTMVARLAQCGRGYESLLTFQGMLE 310
Score = 76.6 bits (187), Expect(2) = 1e-40
Identities = 38/65 (58%), Positives = 46/65 (70%)
Frame = +1
Query: 325 LIFSAGCWKSIVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMY 504
L F +SI+PNAVTL+SVLLACSHLG+L QG+S H Y++R TALLDMY
Sbjct: 303 LTFQGMLEESIIPNAVTLSSVLLACSHLGSLLQGKSTHGYILRHGIELDIVAYTALLDMY 362
Query: 505 AKCGA 519
AKCG+
Sbjct: 363 AKCGS 367
Score = 60.8 bits (146), Expect(2) = 1e-09
Identities = 30/105 (28%), Positives = 53/105 (50%)
Frame = +3
Query: 30 FHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSLLDLYGN 209
F M E + ++ ++ AC ++ S +G++ H L+ + + T+LLD+Y
Sbjct: 305 FQGMLEESIIPNAVTLSSVLLACSHLGSLLQGKSTHGYILRHGIELDIVAYTALLDMYAK 364
Query: 210 SGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
G ID+A K+FD+M +++ W++MI G LD F M
Sbjct: 365 CGSIDMAYKVFDQMQQRNIFTWTAMIGGFGMHGMVSRVLDLFHQM 409
Score = 29.3 bits (64), Expect(2) = 1e-09
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 358 VPNAVTLASVLLACSHLGALQQG 426
+PN+VT S+L A SH G++Q+G
Sbjct: 415 MPNSVTFVSLLSALSHSGSVQKG 437
>gb|PKU70880.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 627
Score = 117 bits (294), Expect(2) = 1e-40
Identities = 57/117 (48%), Positives = 84/117 (71%), Gaps = 1/117 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLL-TNFYL 179
S+D+++ + F +M E + + +AVCL RA GN+ + K+GRA+HA+ +K+ L+ +N YL
Sbjct: 194 SMDLEVVECFDKMKELRVQLNPCAAVCLARAFGNLAAAKQGRAIHALFIKSALMASNVYL 253
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGMLE 350
QTSLLD+Y SG I+ A K+F E+ KD+V WS+M+A LAQCGR ++L F GMLE
Sbjct: 254 QTSLLDMYMKSGFIECAHKLFGELPCKDIVSWSTMVARLAQCGRGYESLLTFQGMLE 310
Score = 76.6 bits (187), Expect(2) = 1e-40
Identities = 38/65 (58%), Positives = 46/65 (70%)
Frame = +1
Query: 325 LIFSAGCWKSIVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMY 504
L F +SI+PNAVTL+SVLLACSHLG+L QG+S H Y++R TALLDMY
Sbjct: 303 LTFQGMLEESIIPNAVTLSSVLLACSHLGSLLQGKSTHGYILRHGIELDIVAYTALLDMY 362
Query: 505 AKCGA 519
AKCG+
Sbjct: 363 AKCGS 367
Score = 60.8 bits (146), Expect(2) = 1e-09
Identities = 30/105 (28%), Positives = 53/105 (50%)
Frame = +3
Query: 30 FHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSLLDLYGN 209
F M E + ++ ++ AC ++ S +G++ H L+ + + T+LLD+Y
Sbjct: 305 FQGMLEESIIPNAVTLSSVLLACSHLGSLLQGKSTHGYILRHGIELDIVAYTALLDMYAK 364
Query: 210 SGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
G ID+A K+FD+M +++ W++MI G LD F M
Sbjct: 365 CGSIDMAYKVFDQMQQRNIFTWTAMIGGFGMHGMVSRVLDLFHQM 409
Score = 29.3 bits (64), Expect(2) = 1e-09
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 358 VPNAVTLASVLLACSHLGALQQG 426
+PN+VT S+L A SH G++Q+G
Sbjct: 415 MPNSVTFVSLLSALSHSGSVQKG 437
>ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
ref|XP_010650331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
ref|XP_010650333.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
ref|XP_010650334.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
ref|XP_019075308.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
emb|CBI17289.3| unnamed protein product, partial [Vitis vinifera]
Length = 688
Score = 109 bits (272), Expect(2) = 5e-36
Identities = 50/116 (43%), Positives = 78/116 (67%), Gaps = 1/116 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLL-TNFYL 179
S + +F+LF RM G ++ L++ACGNV +GKEG+ H +C+K N + +NF+L
Sbjct: 193 SEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFL 252
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGML 347
QTSL+D+Y G +D A K+F+E+ ++DVV WS++IA A+ GRA +++ F ML
Sbjct: 253 QTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQML 308
Score = 69.7 bits (169), Expect(2) = 5e-36
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = +1
Query: 352 SIVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCG 516
S+ PN+VT AS++LACS LG+L+QGRS+H YM+R T+ +DMYAKCG
Sbjct: 311 SVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCG 365
Score = 57.8 bits (138), Expect(2) = 4e-10
Identities = 31/115 (26%), Positives = 58/115 (50%)
Frame = +3
Query: 12 IKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSL 191
++ +F +M + ++ +V AC ++ S K+GR+VH ++ + + TS
Sbjct: 298 LESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSF 357
Query: 192 LDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGMLEVD 356
+D+Y G I A ++F ++ K+V WS+MI G +AL+ F M V+
Sbjct: 358 IDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVN 412
Score = 33.9 bits (76), Expect(2) = 4e-10
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 358 VPNAVTLASVLLACSHLGALQQGRSIHAYMVR 453
+PN+VT SVL ACSH G +++G S M R
Sbjct: 414 LPNSVTFVSVLSACSHSGRIEEGWSHFKSMSR 445
>ref|XP_010262488.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Nelumbo nucifera]
Length = 557
Score = 100 bits (249), Expect(2) = 6e-33
Identities = 49/117 (41%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLL-TNFYL 179
S + ++F+L+H M G ++ S L+RACGNV +G+EG A+H C+K + + L
Sbjct: 141 SKEYEVFELYHEMVSAGYELDSFSVEGLIRACGNVCAGREGNALHGYCIKRCFMDSGICL 200
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGMLE 350
QT ++D+Y GL++ A K+F+E+ KDVV WSSMIA ++ GR A+ F MLE
Sbjct: 201 QTCIVDMYTKCGLLECALKLFEEISDKDVVLWSSMIAGFSKNGRTWQAISLFHQMLE 257
Score = 68.2 bits (165), Expect(2) = 6e-33
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCG 516
+SIVPNAVT +SVL ACSHLG+LQ G++IH Y+ R TA +D+YAKCG
Sbjct: 258 ESIVPNAVTFSSVLPACSHLGSLQLGKAIHGYVTRTDFELDVVSYTAFIDIYAKCG 313
Score = 57.4 bits (137), Expect(2) = 2e-10
Identities = 29/107 (27%), Positives = 57/107 (53%)
Frame = +3
Query: 27 LFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSLLDLYG 206
LFH+M E + ++ ++ AC ++ S + G+A+H +T+ + T+ +D+Y
Sbjct: 251 LFHQMLEESIVPNAVTFSSVLPACSHLGSLQLGKAIHGYVTRTDFELDVVSYTAFIDIYA 310
Query: 207 NSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGML 347
G + +A +MF++M ++V WS+MI G +A + F M+
Sbjct: 311 KCGHVWIAYRMFNKMPERNVYSWSAMINGFGIHGLYSEAFNLFAQMM 357
Score = 35.4 bits (80), Expect(2) = 2e-10
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 328 IFSAGCWKSIVPNAVTLASVLLACSHLGALQQG-RSIHAYMVRXXXXXXXXXXTALLDMY 504
+F+ +++ PN++T SVL ACSH G +++G R H+ ++D+
Sbjct: 352 LFAQMMSENLEPNSITFVSVLSACSHSGRIEEGWRYFHSMSRDHGISPAEEHYACMVDLL 411
Query: 505 AKCG 516
A+ G
Sbjct: 412 ARAG 415
>gb|KJB42239.1| hypothetical protein B456_007G144200 [Gossypium raimondii]
Length = 564
Score = 100 bits (249), Expect(2) = 4e-32
Identities = 48/117 (41%), Positives = 76/117 (64%), Gaps = 1/117 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLL-TNFYL 179
S ++++F+LF RM + + LVRACGNV + KEG+ H +C+K N + ++ +L
Sbjct: 186 SEELEVFELFRRMKRSDFEFDTFTVEGLVRACGNVLADKEGKMFHGLCIKRNFIGSSLFL 245
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGMLE 350
QTSL+ +Y GL+DL K+F+E +DVV WS+MI+ LA+ G+ +A+ F ML+
Sbjct: 246 QTSLIYMYLKCGLLDLGLKLFEEANERDVVSWSAMISGLAKNGKGSEAIALFRQMLQ 302
Score = 65.5 bits (158), Expect(2) = 4e-32
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +1
Query: 355 IVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCGA 519
+ PN+ TLAS+LLACS G+L+QG+S+H YM+R TA +DMYAKCG+
Sbjct: 306 LTPNSATLASILLACSFGGSLKQGKSVHGYMMRKGVDLDDLNYTAFIDMYAKCGS 360
Score = 50.4 bits (119), Expect(2) = 2e-07
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = +3
Query: 27 LFHRMNERGL---DMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSLLD 197
LF +M ++ L + L+++ L AC S K+G++VH ++ + + T+ +D
Sbjct: 296 LFRQMLQQPLLTPNSATLASILL--ACSFGGSLKQGKSVHGYMMRKGVDLDDLNYTAFID 353
Query: 198 LYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
+Y G I +A+K+F +M K+VV WS+MI + G +AL F M
Sbjct: 354 MYAKCGSIAMAQKVFVQMPVKNVVSWSAMINAFGIHGLCSEALACFDQM 402
Score = 32.0 bits (71), Expect(2) = 2e-07
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 358 VPNAVTLASVLLACSHLGALQQG 426
VPN++T S+L ACSH G + +G
Sbjct: 408 VPNSITFVSILSACSHSGKVAEG 430
>ref|XP_017612525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Gossypium arboreum]
Length = 571
Score = 103 bits (258), Expect(2) = 7e-32
Identities = 49/117 (41%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLL-TNFYL 179
S ++++F+LF RM + + LVRACGNV + KEG+ H +C+K N + ++ +L
Sbjct: 193 SEELEVFELFRRMKRSDFEFDTFTVEGLVRACGNVLADKEGKMFHGLCIKRNFIGSSLFL 252
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGMLE 350
QTSL+D+Y GL+DL K+F+E +DVV WS+MI+ LA+ G+ +A+ F ML+
Sbjct: 253 QTSLIDMYLKCGLLDLGLKLFEEANERDVVSWSAMISGLAKNGKGSEAIALFRQMLQ 309
Score = 61.2 bits (147), Expect(2) = 7e-32
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +1
Query: 355 IVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCGA 519
+ PN+ TLAS+LLACS G+L+QG+ +H Y +R TA +DMYAKCG+
Sbjct: 313 LTPNSATLASILLACSLGGSLKQGKRVHGYTIRKGVDLDDLNYTAFIDMYAKCGS 367
Score = 52.8 bits (125), Expect(2) = 1e-07
Identities = 27/115 (23%), Positives = 54/115 (46%)
Frame = +3
Query: 12 IKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSL 191
+ + LF+RM + + + V ++AC + K+G +H + +K L + Y+ +L
Sbjct: 95 LDVLRLFNRMRREIVGVDSFNLVFAIKACNGLSFLKDGELIHCLAVKFGLAGDPYVAPAL 154
Query: 192 LDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGMLEVD 356
+YG G + ARK+F+ ++ V W +M+ + + + F M D
Sbjct: 155 CKMYGQLGSLRDARKVFEGFPGRNSVFWGTMMKGYLKFSEELEVFELFRRMKRSD 209
Score = 30.4 bits (67), Expect(2) = 1e-07
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 373 TLASVLLACSHLGALQQGRSIHAYMV-RXXXXXXXXXXTALLDMYAKCG 516
T+ ++ AC ++ A ++G+ H + R T+L+DMY KCG
Sbjct: 216 TVEGLVRACGNVLADKEGKMFHGLCIKRNFIGSSLFLQTSLIDMYLKCG 264
Score = 49.7 bits (117), Expect(2) = 4e-07
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Frame = +3
Query: 27 LFHRMNERGL---DMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSLLD 197
LF +M ++ L + L+++ L AC S K+G+ VH ++ + + T+ +D
Sbjct: 303 LFRQMLQQPLLTPNSATLASILL--ACSLGGSLKQGKRVHGYTIRKGVDLDDLNYTAFID 360
Query: 198 LYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
+Y G I +A+K+F +M K+VV WS+MI + G +AL F M
Sbjct: 361 MYAKCGSIAMAQKVFVQMPVKNVVSWSAMINAFGIHGLCSEALACFDQM 409
Score = 32.0 bits (71), Expect(2) = 4e-07
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 358 VPNAVTLASVLLACSHLGALQQG 426
VPN++T S+L ACSH G + +G
Sbjct: 415 VPNSITFVSILSACSHSGKVAEG 437
>ref|XP_010501338.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like [Camelina sativa]
Length = 559
Score = 103 bits (257), Expect(2) = 9e-32
Identities = 48/116 (41%), Positives = 80/116 (68%), Gaps = 1/116 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLL-TNFYL 179
S D ++F LF+ M + G+ + L+ +CLV+ACGNV +GKEG++VH + ++ N + + YL
Sbjct: 190 SKDSEVFRLFYLMRDEGITLHALALICLVKACGNVFAGKEGKSVHGLSIRRNFVDQSDYL 249
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGML 347
Q S++D+Y L+D ARK+F+ + ++VV W+++I+ A+C RA +A D F ML
Sbjct: 250 QASVVDMYVKCRLLDDARKLFERCVDRNVVMWTTLISGFAKCERAVEAFDMFRKML 305
Score = 61.2 bits (147), Expect(2) = 9e-32
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = +1
Query: 355 IVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCG 516
I+PN TLA++L++CS +G+L+QG+S+H YM+R T+ +DMYA+CG
Sbjct: 309 ILPNQCTLAALLVSCSSMGSLKQGKSVHGYMIRNEVEMDAVNITSFVDMYARCG 362
Score = 64.3 bits (155), Expect(2) = 7e-12
Identities = 34/111 (30%), Positives = 62/111 (55%)
Frame = +3
Query: 12 IKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSL 191
++ FD+F +M + Q + L+ +C ++ S K+G++VH ++ + + TS
Sbjct: 295 VEAFDMFRKMLGELILPNQCTLAALLVSCSSMGSLKQGKSVHGYMIRNEVEMDAVNITSF 354
Query: 192 LDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
+D+Y G I +A+K+FD M ++V+ WSSMI + G +AL+ F M
Sbjct: 355 VDMYARCGNIQMAQKVFDVMPERNVISWSSMINAFGINGLFEEALECFDKM 405
Score = 33.5 bits (75), Expect(2) = 7e-12
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQG 426
+++VPN+VT S+L ACSH G +++G
Sbjct: 408 QNLVPNSVTFVSLLSACSHSGNVKEG 433
>gb|PPD97530.1| hypothetical protein GOBAR_DD05426 [Gossypium barbadense]
Length = 569
Score = 103 bits (258), Expect(2) = 3e-31
Identities = 49/117 (41%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLL-TNFYL 179
S ++++F+LF RM + + LVRACGNV + KEG+ H +C+K N + ++ +L
Sbjct: 186 SEELEVFELFRRMKRSDFEFDTFTVEGLVRACGNVLADKEGKMFHGLCIKRNFIGSSLFL 245
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGMLE 350
QTSL+D+Y GL+DL K+F+E +DVV WS+MI+ LA+ G+ +A+ F ML+
Sbjct: 246 QTSLIDMYLKCGLLDLGLKLFEEANERDVVSWSAMISGLAKNGKGSEAIALFRQMLQ 302
Score = 58.9 bits (141), Expect(2) = 3e-31
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +1
Query: 355 IVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCGA 519
+ PN+ TLAS+LLA S G+L+QG+S+H Y +R TA +DMYAKCG+
Sbjct: 306 LTPNSATLASILLAFSLGGSLKQGKSVHGYTIRKGVDLDDLNYTAFIDMYAKCGS 360
Score = 52.4 bits (124), Expect(2) = 2e-07
Identities = 28/115 (24%), Positives = 54/115 (46%)
Frame = +3
Query: 12 IKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSL 191
+ + LF+RM + + + V ++AC + K+G +H + LK L + Y+ +L
Sbjct: 88 LDVLRLFNRMRREIVGVDSFNLVFAIKACIGLSFLKDGELIHCLALKFGLAGDPYVAPAL 147
Query: 192 LDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGMLEVD 356
+YG G + ARK+F+ ++ V W +M+ + + + F M D
Sbjct: 148 CKMYGQLGSLRDARKVFEGFPGRNSVFWGTMMKGYLKFSEELEVFELFRRMKRSD 202
Score = 30.4 bits (67), Expect(2) = 2e-07
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 373 TLASVLLACSHLGALQQGRSIHAYMV-RXXXXXXXXXXTALLDMYAKCG 516
T+ ++ AC ++ A ++G+ H + R T+L+DMY KCG
Sbjct: 209 TVEGLVRACGNVLADKEGKMFHGLCIKRNFIGSSLFLQTSLIDMYLKCG 257
Score = 49.7 bits (117), Expect(2) = 4e-07
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = +3
Query: 27 LFHRMNERGL---DMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSLLD 197
LF +M ++ L + L+++ L + G S K+G++VH ++ + + T+ +D
Sbjct: 296 LFRQMLQQPLLTPNSATLASILLAFSLGG--SLKQGKSVHGYTIRKGVDLDDLNYTAFID 353
Query: 198 LYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
+Y G I +A+K+F +M K+VV WS+MI + G +AL F M
Sbjct: 354 MYAKCGSIAMAQKVFVQMPVKNVVSWSAMINAFGIHGLCSEALACFDQM 402
Score = 32.0 bits (71), Expect(2) = 4e-07
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 358 VPNAVTLASVLLACSHLGALQQG 426
VPN++T S+L ACSH G + +G
Sbjct: 408 VPNSITFVSILSACSHSGKVAEG 430
>gb|PPR81554.1| hypothetical protein GOBAR_AA39156 [Gossypium barbadense]
Length = 562
Score = 103 bits (258), Expect(2) = 3e-31
Identities = 49/117 (41%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLL-TNFYL 179
S ++++F+LF RM + + LVRACGNV + KEG+ H +C+K N + ++ +L
Sbjct: 186 SEELEVFELFRRMKRSDFEFDTFTVEGLVRACGNVLADKEGKMFHGLCIKRNFIGSSLFL 245
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGMLE 350
QTSL+D+Y GL+DL K+F+E +DVV WS+MI+ LA+ G+ +A+ F ML+
Sbjct: 246 QTSLIDMYLKCGLLDLGLKLFEEANERDVVSWSAMISGLAKNGKGSEAIALFRQMLQ 302
Score = 58.9 bits (141), Expect(2) = 3e-31
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +1
Query: 355 IVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCGA 519
+ PN+ TLAS+LLA S G+L+QG+S+H Y +R TA +DMYAKCG+
Sbjct: 306 LTPNSATLASILLAFSLGGSLKQGKSVHGYTIRKGVDLDDLNYTAFIDMYAKCGS 360
Score = 52.8 bits (125), Expect(2) = 1e-07
Identities = 27/115 (23%), Positives = 54/115 (46%)
Frame = +3
Query: 12 IKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSL 191
+ + LF+RM + + + V ++AC + K+G +H + +K L + Y+ +L
Sbjct: 88 LDVLRLFNRMRREIVGVDSFNLVFAIKACNGLSFLKDGELIHCLAVKFGLAGDPYVAPAL 147
Query: 192 LDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGMLEVD 356
+YG G + ARK+F+ ++ V W +M+ + + + F M D
Sbjct: 148 CKMYGQLGSLRDARKVFEGFPGRNSVFWGTMMKGYLKFSEELEVFELFRRMKRSD 202
Score = 30.4 bits (67), Expect(2) = 1e-07
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 373 TLASVLLACSHLGALQQGRSIHAYMV-RXXXXXXXXXXTALLDMYAKCG 516
T+ ++ AC ++ A ++G+ H + R T+L+DMY KCG
Sbjct: 209 TVEGLVRACGNVLADKEGKMFHGLCIKRNFIGSSLFLQTSLIDMYLKCG 257
Score = 49.7 bits (117), Expect(2) = 4e-07
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = +3
Query: 27 LFHRMNERGL---DMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSLLD 197
LF +M ++ L + L+++ L + G S K+G++VH ++ + + T+ +D
Sbjct: 296 LFRQMLQQPLLTPNSATLASILLAFSLGG--SLKQGKSVHGYTIRKGVDLDDLNYTAFID 353
Query: 198 LYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
+Y G I +A+K+F +M K+VV WS+MI + G +AL F M
Sbjct: 354 MYAKCGSIAMAQKVFVQMPVKNVVSWSAMINAFGIHGLCSEALACFDQM 402
Score = 32.0 bits (71), Expect(2) = 4e-07
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 358 VPNAVTLASVLLACSHLGALQQG 426
VPN++T S+L ACSH G + +G
Sbjct: 408 VPNSITFVSILSACSHSGKVAEG 430
>ref|XP_010457734.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Camelina sativa]
Length = 558
Score = 102 bits (255), Expect(2) = 6e-31
Identities = 48/116 (41%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLL-TNFYL 179
S D ++F LF+ M ++G+ + L+ +CLV+ACGNV +GKEG++VH + ++ N L + YL
Sbjct: 189 SKDSEVFRLFYLMRDKGITLHALALICLVKACGNVFAGKEGKSVHGLSIRRNFLDESDYL 248
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGML 347
Q S +D+Y L+D AR +F+ + ++VV W+++I+ A+C RA +A D F ML
Sbjct: 249 QASTVDMYVKCRLLDDARNLFERSVDRNVVMWTTLISGFAKCERAVEAFDLFRKML 304
Score = 59.3 bits (142), Expect(2) = 6e-31
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = +1
Query: 355 IVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCG 516
I+PN TLA++L++CS LG+ +QG+S+H YM+R T+ +DMYA+CG
Sbjct: 308 ILPNQCTLAALLVSCSSLGSPKQGKSVHGYMIRNEIEMDAVNVTSFVDMYARCG 361
Score = 68.9 bits (167), Expect(2) = 3e-13
Identities = 36/111 (32%), Positives = 62/111 (55%)
Frame = +3
Query: 12 IKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSL 191
++ FDLF +M + Q + L+ +C ++ S K+G++VH ++ + + TS
Sbjct: 294 VEAFDLFRKMLRELILPNQCTLAALLVSCSSLGSPKQGKSVHGYMIRNEIEMDAVNVTSF 353
Query: 192 LDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
+D+Y G I +A+K+FD M ++V+ WSSMI + G +ALD F M
Sbjct: 354 VDMYARCGNIQMAQKVFDVMPERNVISWSSMINAFGINGLFEEALDCFDKM 404
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQG 426
+++VPN+VT S+L ACSH G +++G
Sbjct: 407 QNLVPNSVTFVSLLSACSHSGNVKEG 432
Score = 46.2 bits (108), Expect(2) = 4e-06
Identities = 23/103 (22%), Positives = 50/103 (48%)
Frame = +3
Query: 27 LFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSLLDLYG 206
L++RM + + V ++AC + + G +H + +K L + Y+ SL+++Y
Sbjct: 96 LYNRMRRHCDGVDSFNLVFAIKACVGLGVLENGMLIHGLAMKNGLDKDDYVAPSLVEMYA 155
Query: 207 NSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFF 335
G ++ A K+FDE+ ++ V W ++ + + + F
Sbjct: 156 QFGNMESAHKVFDEITVRNSVLWGVLMKGYLKYSKDSEVFRLF 198
Score = 32.0 bits (71), Expect(2) = 4e-06
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTA-LLDMYAKC 513
K I +A+ L ++ AC ++ A ++G+S+H +R A +DMY KC
Sbjct: 204 KGITLHALALICLVKACGNVFAGKEGKSVHGLSIRRNFLDESDYLQASTVDMYVKC 259
>ref|XP_010480363.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like [Camelina sativa]
Length = 559
Score = 99.8 bits (247), Expect(2) = 7e-31
Identities = 46/116 (39%), Positives = 78/116 (67%), Gaps = 1/116 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLL-TNFYL 179
S D ++F LF+ M + + + L+ +CLV+ACGNV +GKEG++VH + ++ N + + YL
Sbjct: 190 SKDSEVFRLFYLMRDESITLHALTLICLVKACGNVFAGKEGKSVHGLSIRRNFVDQSDYL 249
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGML 347
Q S++D+Y L+D AR +F+ + ++VV W+++I+ A+C RA +A D F ML
Sbjct: 250 QASIVDMYVKCRLLDDARNLFERCVDRNVVMWTTLISGFAKCERAVEAFDMFRKML 305
Score = 62.0 bits (149), Expect(2) = 7e-31
Identities = 26/54 (48%), Positives = 39/54 (72%)
Frame = +1
Query: 355 IVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCG 516
I+PN TLA++L++CS LG+L+QG+S+H YM+R T+ +DMYA+CG
Sbjct: 309 ILPNQCTLAALLVSCSSLGSLKQGKSVHGYMIRNEIEMDAVNITSFVDMYARCG 362
Score = 64.7 bits (156), Expect(2) = 5e-12
Identities = 34/111 (30%), Positives = 62/111 (55%)
Frame = +3
Query: 12 IKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSL 191
++ FD+F +M + Q + L+ +C ++ S K+G++VH ++ + + TS
Sbjct: 295 VEAFDMFRKMLGELILPNQCTLAALLVSCSSLGSLKQGKSVHGYMIRNEIEMDAVNITSF 354
Query: 192 LDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
+D+Y G I +A+K+FD M ++V+ WSSMI + G +AL+ F M
Sbjct: 355 VDMYARCGNIQMAQKVFDMMPERNVISWSSMINAFGINGLFEEALECFDKM 405
Score = 33.5 bits (75), Expect(2) = 5e-12
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQG 426
+++VPN+VT S+L ACSH G +++G
Sbjct: 408 QNLVPNSVTFVSLLSACSHSGNVKEG 433
Score = 44.3 bits (103), Expect(2) = 2e-06
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +3
Query: 27 LFHRMNERGLD-MGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSLLDLY 203
L++RM D + + V ++AC ++ G +H + +K L + Y+ SL+++Y
Sbjct: 96 LYNRMRRHCDDGVDSFNLVFAIKACVGLRVLDNGMLIHGLAMKNGLDKDDYVAPSLVEMY 155
Query: 204 GNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFF 335
G +D A K+FDE+ + V W ++ + + + F
Sbjct: 156 AQFGDMDSAHKVFDEITVGNSVLWGVLMKGYLKYSKDSEVFRLF 199
Score = 35.0 bits (79), Expect(2) = 2e-06
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTA-LLDMYAKC 513
+SI +A+TL ++ AC ++ A ++G+S+H +R A ++DMY KC
Sbjct: 205 ESITLHALTLICLVKACGNVFAGKEGKSVHGLSIRRNFVDQSDYLQASIVDMYVKC 260
>gb|OAP16609.1| MEF3 [Arabidopsis thaliana]
Length = 558
Score = 98.2 bits (243), Expect(2) = 9e-31
Identities = 47/116 (40%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNF-YL 179
S D ++F LF M + GL + L+ +CLV+ACGNV +GK G+ VH + ++ + + YL
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGML 347
Q S++D+Y L+D ARK+F+ + ++VV W+++I+ A+C RA +A D F ML
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQML 304
Score = 63.2 bits (152), Expect(2) = 9e-31
Identities = 26/56 (46%), Positives = 40/56 (71%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCG 516
+SI+PN TLA++L++CS LG+L+ G+S+H YM+R T+ +DMYA+CG
Sbjct: 306 ESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRYGIEMDAVNFTSFIDMYARCG 361
Score = 64.7 bits (156), Expect(2) = 4e-12
Identities = 34/111 (30%), Positives = 60/111 (54%)
Frame = +3
Query: 12 IKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSL 191
++ FDLF +M + Q + ++ +C ++ S + G++VH ++ + + TS
Sbjct: 294 VEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRYGIEMDAVNFTSF 353
Query: 192 LDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
+D+Y G I +AR +FD M ++V+ WSSMI + G +ALD F M
Sbjct: 354 IDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKM 404
Score = 33.9 bits (76), Expect(2) = 4e-12
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQG 426
+++VPN+VT S+L ACSH G +++G
Sbjct: 407 QNVVPNSVTFVSLLSACSHSGNVKEG 432
>ref|NP_172104.1| Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis
thaliana]
sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gb|AEE27946.1| Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis
thaliana]
Length = 558
Score = 98.2 bits (243), Expect(2) = 9e-31
Identities = 47/116 (40%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNF-YL 179
S D ++F LF M + GL + L+ +CLV+ACGNV +GK G+ VH + ++ + + YL
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 180 QTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGML 347
Q S++D+Y L+D ARK+F+ + ++VV W+++I+ A+C RA +A D F ML
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQML 304
Score = 63.2 bits (152), Expect(2) = 9e-31
Identities = 26/56 (46%), Positives = 40/56 (71%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCG 516
+SI+PN TLA++L++CS LG+L+ G+S+H YM+R T+ +DMYA+CG
Sbjct: 306 ESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCG 361
Score = 65.5 bits (158), Expect(2) = 2e-12
Identities = 34/111 (30%), Positives = 60/111 (54%)
Frame = +3
Query: 12 IKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSL 191
++ FDLF +M + Q + ++ +C ++ S + G++VH ++ + + TS
Sbjct: 294 VEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSF 353
Query: 192 LDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
+D+Y G I +AR +FD M ++V+ WSSMI + G +ALD F M
Sbjct: 354 IDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKM 404
Score = 33.9 bits (76), Expect(2) = 2e-12
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQG 426
+++VPN+VT S+L ACSH G +++G
Sbjct: 407 QNVVPNSVTFVSLLSACSHSGNVKEG 432
>ref|XP_013643137.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like [Brassica napus]
ref|XP_013643138.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like [Brassica napus]
ref|XP_022543273.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like [Brassica napus]
ref|XP_022543274.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like [Brassica napus]
ref|XP_022543275.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like [Brassica napus]
ref|XP_022543276.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like [Brassica napus]
ref|XP_022543277.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like [Brassica napus]
ref|XP_022543278.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like [Brassica napus]
ref|XP_022543279.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like [Brassica napus]
Length = 555
Score = 99.0 bits (245), Expect(2) = 1e-30
Identities = 49/117 (41%), Positives = 78/117 (66%), Gaps = 2/117 (1%)
Frame = +3
Query: 3 SVDIKIFDLFHRMNERGLDMGQ-LSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNF-Y 176
S D ++F LF+ M E GL + L+ +CLV+ACGNV +GKEG++VH + ++ + Y
Sbjct: 185 SRDSEVFRLFYLMREAGLGVDNALTLICLVKACGNVFAGKEGKSVHGLSIRRGFIDQSGY 244
Query: 177 LQTSLLDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGML 347
LQ S++D+Y L+D AR+MF+ + K+VV W+++++ A+C RA +A D F ML
Sbjct: 245 LQASVVDMYVKCRLLDNAREMFETSVDKNVVMWTTLVSGFAKCERAVEAFDLFRQML 301
Score = 62.0 bits (149), Expect(2) = 1e-30
Identities = 26/56 (46%), Positives = 39/56 (69%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQGRSIHAYMVRXXXXXXXXXXTALLDMYAKCG 516
+S++PN TLA+VL++CS LG+ + GRS+H YM+R T+ +DMYA+CG
Sbjct: 303 ESVLPNQCTLAAVLVSCSSLGSQRHGRSVHGYMIRNEIEMDAVNFTSFIDMYARCG 358
Score = 72.4 bits (176), Expect(2) = 1e-14
Identities = 37/111 (33%), Positives = 62/111 (55%)
Frame = +3
Query: 12 IKIFDLFHRMNERGLDMGQLSAVCLVRACGNVQSGKEGRAVHAICLKTNLLTNFYLQTSL 191
++ FDLF +M + Q + ++ +C ++ S + GR+VH ++ + + TS
Sbjct: 291 VEAFDLFRQMLRESVLPNQCTLAAVLVSCSSLGSQRHGRSVHGYMIRNEIEMDAVNFTSF 350
Query: 192 LDLYGNSGLIDLARKMFDEMMHKDVVPWSSMIASLAQCGRACDALDFFGGM 344
+D+Y G I +ARK+FD M ++V+ WSSMI + G +ALD FG M
Sbjct: 351 IDMYARCGNIQMARKVFDTMPERNVISWSSMINAFGINGILEEALDCFGKM 401
Score = 35.0 bits (79), Expect(2) = 1e-14
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 349 KSIVPNAVTLASVLLACSHLGALQQGRSIHAYM 447
+++ PN+VT S+L ACSH G + +GR A M
Sbjct: 404 RNLTPNSVTYVSLLSACSHSGNINEGRKQFASM 436