BLASTX nr result

ID: Cheilocostus21_contig00051091 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00051091
         (674 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009381595.1| PREDICTED: golgin subfamily B member 1 isofo...    97   3e-19
ref|XP_010927246.1| PREDICTED: centromere-associated protein E [...    64   4e-08

>ref|XP_009381595.1| PREDICTED: golgin subfamily B member 1 isoform X1 [Musa acuminata
           subsp. malaccensis]
 ref|XP_018674756.1| PREDICTED: golgin subfamily B member 1 isoform X1 [Musa acuminata
           subsp. malaccensis]
          Length = 2655

 Score = 96.7 bits (239), Expect = 3e-19
 Identities = 60/131 (45%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
 Frame = -2

Query: 388 MDKSKRSDLLAAGRKKLLQFRQKKDHKGGNKDAXXXXXXXXXXXKDVHVDETTKILEPEP 209
           MDKSKRSDLLAAGRKKL QFRQKKD KGG KD                 + T KI EP+P
Sbjct: 1   MDKSKRSDLLAAGRKKLRQFRQKKDQKGGGKDGQSSSNGIKLEKDVDPGERTNKISEPDP 60

Query: 208 XXXXXXXXXXXXXTYSSNPTTS--HVNLPTAESAELVDQGARDDARDPEEAQIELSAGCE 35
                            +P+++  HV+L   +SA++VDQG++D+  D E+A IEL    E
Sbjct: 61  GTLTSAVDSDVSAMDLLDPSSAVHHVDLRGVDSAQVVDQGSQDEGGDAEQALIELPVVGE 120

Query: 34  VSSLALEINHE 2
            SS A EI HE
Sbjct: 121 GSSSAFEIVHE 131


>ref|XP_010927246.1| PREDICTED: centromere-associated protein E [Elaeis guineensis]
          Length = 2751

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 37/61 (60%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = -2

Query: 388 MDKSK-RSDLLAAGRKKLLQFRQKKDHKGGNKDAXXXXXXXXXXXKDVHVDETTKILEPE 212
           MDK+K R+DLLAAGRKKL QFRQKKDHKGG   A           KD   DE TK+ EPE
Sbjct: 1   MDKTKNRTDLLAAGRKKLQQFRQKKDHKGGGSHA-KSLNKASRPGKDADADELTKVTEPE 59

Query: 211 P 209
           P
Sbjct: 60  P 60


Top